RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
SMARCA4-217ENST00000591595 SAMD9LQ8IVG5 1584 aa15.37■□□□□ 0.05
SMARCA4-217ENST00000591595 E9PCH4 1651 aa15.36■□□□□ 0.05
SMARCA4-217ENST00000591595 KCNG1Q9UIX4 513 aa15.36■□□□□ 0.05
SMARCA4-217ENST00000591595 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
SMARCA4-217ENST00000591595 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
SMARCA4-217ENST00000591595 APAF1O14727 1248 aa15.35■□□□□ 0.05
SMARCA4-217ENST00000591595 MSNP26038 577 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-217ENST00000591595 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
SMARCA4-217ENST00000591595 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-217ENST00000591595 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
SMARCA4-217ENST00000591595 CERS3Q8IU89 383 aa15.33■□□□□ 0.04
SMARCA4-217ENST00000591595 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
SMARCA4-217ENST00000591595 PRDM15P57071 1507 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-217ENST00000591595 BECN1Q14457 450 aa15.32■□□□□ 0.04
SMARCA4-217ENST00000591595 CBX1P83916 185 aa15.31■□□□□ 0.04
SMARCA4-217ENST00000591595 WWC1Q8IX03 1113 aa15.31■□□□□ 0.04
SMARCA4-217ENST00000591595 INSRP06213 1382 aa15.31■□□□□ 0.04
SMARCA4-217ENST00000591595 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-217ENST00000591595 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
SMARCA4-217ENST00000591595 KDM2BQ8NHM5 1336 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 MCM4P33991 863 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 MAGI2Q86UL8 1455 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 TRAK2O60296 914 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 BCAR3O75815 825 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 SLFN5Q08AF3 891 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
SMARCA4-217ENST00000591595 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-217ENST00000591595 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMARCA4-217ENST00000591595 AFAP1Q8N556 730 aa15.29■□□□□ 0.04
SMARCA4-217ENST00000591595 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
SMARCA4-217ENST00000591595 SLC20A2Q08357 652 aa15.28■□□□□ 0.04
SMARCA4-217ENST00000591595 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-217ENST00000591595 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-217ENST00000591595 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
SMARCA4-217ENST00000591595 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
SMARCA4-217ENST00000591595 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-217ENST00000591595 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.04
SMARCA4-217ENST00000591595 MMP14P50281 582 aa15.27■□□□□ 0.03
SMARCA4-217ENST00000591595 WDR7Q9Y4E6 1490 aa15.26■□□□□ 0.03
SMARCA4-217ENST00000591595 CLGNO14967 610 aa15.26■□□□□ 0.03
SMARCA4-217ENST00000591595 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-217ENST00000591595 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
SMARCA4-217ENST00000591595 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
SMARCA4-217ENST00000591595 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-217ENST00000591595 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
SMARCA4-217ENST00000591595 DUOX2Q9NRD8 1548 aa15.25■□□□□ 0.03
SMARCA4-217ENST00000591595 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
SMARCA4-217ENST00000591595 APPP05067 770 aa15.24■□□□□ 0.03
SMARCA4-217ENST00000591595 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-217ENST00000591595 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
SMARCA4-217ENST00000591595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.24■□□□□ 0.034e-7■■□□□ 14.3
SMARCA4-217ENST00000591595 KIF3BO15066 747 aa15.24■□□□□ 0.03
SMARCA4-217ENST00000591595 COG6Q9Y2V7 657 aa15.24■□□□□ 0.03
SMARCA4-217ENST00000591595 UNC13BO14795 1591 aa15.23■□□□□ 0.03
SMARCA4-217ENST00000591595 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-217ENST00000591595 KCNJ4P48050 445 aa15.23■□□□□ 0.03
SMARCA4-217ENST00000591595 SCAF11Q99590 1463 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-217ENST00000591595 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
SMARCA4-217ENST00000591595 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-217ENST00000591595 PANK1Q8TE04 598 aa15.22■□□□□ 0.03
SMARCA4-217ENST00000591595 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
SMARCA4-217ENST00000591595 TRAPPC8Q9Y2L5 1435 aa15.21■□□□□ 0.03
SMARCA4-217ENST00000591595 NGEFQ8N5V2 710 aa15.21■□□□□ 0.03
SMARCA4-217ENST00000591595 PPP1R9BQ96SB3 815 aa15.21■□□□□ 0.03
SMARCA4-217ENST00000591595 IQGAP3Q86VI3 1631 aa15.21■□□□□ 0.03
SMARCA4-217ENST00000591595 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.02
SMARCA4-217ENST00000591595 SASS6Q6UVJ0 657 aa15.21■□□□□ 0.02
SMARCA4-217ENST00000591595 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.02
SMARCA4-217ENST00000591595 KANK1Q14678 1352 aa15.2■□□□□ 0.02
SMARCA4-217ENST00000591595 PSEN1P49768 467 aa15.2■□□□□ 0.02
SMARCA4-217ENST00000591595 ATP10AO60312 1499 aa15.2■□□□□ 0.02
SMARCA4-217ENST00000591595 NKTRP30414 1462 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-217ENST00000591595 MAST1Q9Y2H9 1570 aa15.2■□□□□ 0.02
SMARCA4-217ENST00000591595 LAMC1P11047 1609 aa15.2■□□□□ 0.02
SMARCA4-217ENST00000591595 IGHDP01880 384 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 FAM193AP78312 1265 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 ZNF771Q7L3S4 317 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 GAS2L3Q86XJ1 694 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 CGNL1Q0VF96 1302 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 ZNF500O60304 480 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 IGSF3O75054 1194 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
SMARCA4-217ENST00000591595 MYO5CQ9NQX4 1742 aa15.18■□□□□ 0.02
SMARCA4-217ENST00000591595 SOX12O15370 315 aa15.18■□□□□ 0.02
SMARCA4-217ENST00000591595 PLCH2O75038 1416 aa15.18■□□□□ 0.02
SMARCA4-217ENST00000591595 CSPP1Q1MSJ5 1256 aa15.18■□□□□ 0.02
SMARCA4-217ENST00000591595 CLUAP1Q96AJ1 413 aa15.18■□□□□ 0.02
SMARCA4-217ENST00000591595 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
SMARCA4-217ENST00000591595 CHMP4CQ96CF2 233 aa15.17■□□□□ 0.02
SMARCA4-217ENST00000591595 USP19O94966 1318 aa15.17■□□□□ 0.02
SMARCA4-217ENST00000591595 CARD14Q9BXL6 1004 aa15.16■□□□□ 0.02
SMARCA4-217ENST00000591595 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-217ENST00000591595 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-217ENST00000591595 TRAK1Q9UPV9 953 aa15.16■□□□□ 0.02
SMARCA4-217ENST00000591595 PLXNC1O60486 1568 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms