RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 COL22A1Q8NFW1 1626 aaPredicted RBP24.06■■□□□ 1.44
DDX39A-216ENST00000591275 PPLO60437 1756 aa24.06■■□□□ 1.44
DDX39A-216ENST00000591275 ESCO1Q5FWF5 840 aa24.06■■□□□ 1.44
DDX39A-216ENST00000591275 ATRNO75882 1429 aa24.05■■□□□ 1.44
DDX39A-216ENST00000591275 RRBP1Q9P2E9 1410 aaKnown RBP24.05■■□□□ 1.44
DDX39A-216ENST00000591275 XPCQ01831 940 aaPredicted RBP24.05■■□□□ 1.44
DDX39A-216ENST00000591275 SLC4A1APQ9BWU0 796 aaKnown RBP24.04■■□□□ 1.44
DDX39A-216ENST00000591275 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
DDX39A-216ENST00000591275 MYOM2P54296 1465 aa24.03■■□□□ 1.44
DDX39A-216ENST00000591275 CDC42BPGQ6DT37 1551 aa24.02■■□□□ 1.44
DDX39A-216ENST00000591275 PXDNQ92626 1479 aa24.01■■□□□ 1.43
DDX39A-216ENST00000591275 FOXO3O43524 673 aa24.01■■□□□ 1.43
DDX39A-216ENST00000591275 NUTM2FA1L443 756 aa24■■□□□ 1.43
DDX39A-216ENST00000591275 FOXD1Q16676 465 aa23.99■■□□□ 1.43
DDX39A-216ENST00000591275 STK26Q9P289 416 aa23.99■■□□□ 1.43
DDX39A-216ENST00000591275 BCL9LQ86UU0 1499 aa23.99■■□□□ 1.43
DDX39A-216ENST00000591275 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
DDX39A-216ENST00000591275 MARF1Q9Y4F3 1742 aaKnown RBP23.98■■□□□ 1.43
DDX39A-216ENST00000591275 WAPLQ7Z5K2 1190 aa23.97■■□□□ 1.43
DDX39A-216ENST00000591275 ZRANB1Q9UGI0 708 aa23.95■■□□□ 1.42
DDX39A-216ENST00000591275 RGL3Q3MIN7 710 aa23.94■■□□□ 1.42
DDX39A-216ENST00000591275 GJD4Q96KN9 370 aaPredicted RBP23.93■■□□□ 1.42
DDX39A-216ENST00000591275 LRPPRCP42704 1394 aaKnown RBP23.91■■□□□ 1.42
DDX39A-216ENST00000591275 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
DDX39A-216ENST00000591275 TMEM132EQ6IEE7 984 aa23.91■■□□□ 1.42
DDX39A-216ENST00000591275 TECPR2O15040 1411 aa23.9■■□□□ 1.42
DDX39A-216ENST00000591275 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.41
DDX39A-216ENST00000591275 CCDC125Q86Z20 511 aa23.88■■□□□ 1.41
DDX39A-216ENST00000591275 UNC5CLQ8IV45 518 aa23.87■■□□□ 1.41
DDX39A-216ENST00000591275 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.87■■□□□ 1.41
DDX39A-216ENST00000591275 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
DDX39A-216ENST00000591275 SPATA31A3Q5VYP0 1347 aa23.86■■□□□ 1.41
DDX39A-216ENST00000591275 SPATA31E1Q6ZUB1 1445 aa23.86■■□□□ 1.41
DDX39A-216ENST00000591275 IFT172Q9UG01 1749 aa23.86■■□□□ 1.41
DDX39A-216ENST00000591275 ABCC11Q96J66 1382 aa23.86■■□□□ 1.41
DDX39A-216ENST00000591275 RALGAPBQ86X10 1494 aa23.86■■□□□ 1.41
DDX39A-216ENST00000591275 GLI3P10071 1580 aa23.86■■□□□ 1.41
DDX39A-216ENST00000591275 KNDC1Q76NI1 1749 aa23.85■■□□□ 1.41
DDX39A-216ENST00000591275 ANKRD30BQ9BXX2 1392 aa23.85■■□□□ 1.41
DDX39A-216ENST00000591275 SLIT2O94813 1529 aa23.84■■□□□ 1.41
DDX39A-216ENST00000591275 PLEKHG5O94827 1062 aa23.84■■□□□ 1.41
DDX39A-216ENST00000591275 KRT28Q7Z3Y7 464 aa23.84■■□□□ 1.41
DDX39A-216ENST00000591275 KIF1AQ12756 1690 aa23.83■■□□□ 1.41
DDX39A-216ENST00000591275 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
DDX39A-216ENST00000591275 YTHDC2Q9H6S0 1430 aaKnown RBP23.82■■□□□ 1.4
DDX39A-216ENST00000591275 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
DDX39A-216ENST00000591275 HAP1P54257 671 aaPredicted RBP23.81■■□□□ 1.4
DDX39A-216ENST00000591275 BRWD3Q6RI45 1802 aa23.81■■□□□ 1.4
DDX39A-216ENST00000591275 BLMP54132 1417 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-216ENST00000591275 CABLES1Q8TDN4 633 aa23.8■■□□□ 1.4
DDX39A-216ENST00000591275 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-216ENST00000591275 DEFB132Q7Z7B7 95 aa23.78■■□□□ 1.4
DDX39A-216ENST00000591275 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
DDX39A-216ENST00000591275 PHF8Q9UPP1 1060 aa23.77■■□□□ 1.4
DDX39A-216ENST00000591275 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
DDX39A-216ENST00000591275 SEPT12Q8IYM1 358 aa23.76■■□□□ 1.39
DDX39A-216ENST00000591275 LMOD2Q6P5Q4 547 aa23.75■■□□□ 1.39
DDX39A-216ENST00000591275 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
DDX39A-216ENST00000591275 PSME1Q06323 249 aa23.74■■□□□ 1.39
DDX39A-216ENST00000591275 SAFB2Q14151 953 aaKnown RBP eCLIP23.74■■□□□ 1.39
DDX39A-216ENST00000591275 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
DDX39A-216ENST00000591275 VPS72Q15906 364 aa23.73■■□□□ 1.39
DDX39A-216ENST00000591275 SF3B2Q13435 895 aaKnown RBP23.72■■□□□ 1.39
DDX39A-216ENST00000591275 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
DDX39A-216ENST00000591275 C14orf93Q9H972 538 aaKnown RBP23.72■■□□□ 1.39
DDX39A-216ENST00000591275 CFAP70Q5T0N1 1121 aa23.71■■□□□ 1.39
DDX39A-216ENST00000591275 ABCA3Q99758 1704 aa23.7■■□□□ 1.39
DDX39A-216ENST00000591275 NRXN1Q9ULB1 1477 aa23.7■■□□□ 1.38
DDX39A-216ENST00000591275 PRAM1Q96QH2 718 aa23.7■■□□□ 1.38
DDX39A-216ENST00000591275 NWD2Q9ULI1 1742 aa23.7■■□□□ 1.38
DDX39A-216ENST00000591275 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
DDX39A-216ENST00000591275 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
DDX39A-216ENST00000591275 KRT27Q7Z3Y8 459 aa23.68■■□□□ 1.38
DDX39A-216ENST00000591275 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
DDX39A-216ENST00000591275 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
DDX39A-216ENST00000591275 A0A0G2JS52 829 aa23.67■■□□□ 1.38
DDX39A-216ENST00000591275 MYT1Q01538 1121 aa23.67■■□□□ 1.38
DDX39A-216ENST00000591275 FAM83GA6ND36 823 aa23.66■■□□□ 1.38
DDX39A-216ENST00000591275 ONECUT3O60422 494 aaPredicted RBP23.66■■□□□ 1.38
DDX39A-216ENST00000591275 POGKQ9P215 609 aa23.64■■□□□ 1.37
DDX39A-216ENST00000591275 FAM98CQ17RN3 349 aaKnown RBP23.61■■□□□ 1.37
DDX39A-216ENST00000591275 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
DDX39A-216ENST00000591275 NRAPQ86VF7 1730 aa23.6■■□□□ 1.37
DDX39A-216ENST00000591275 PSDA5PKW4 1024 aaPredicted RBP23.6■■□□□ 1.37
DDX39A-216ENST00000591275 HIRIP3Q9BW71 556 aaPredicted RBP23.6■■□□□ 1.37
DDX39A-216ENST00000591275 BTG4Q9NY30 223 aa23.6■■□□□ 1.37
DDX39A-216ENST00000591275 TRPM3Q9HCF6 1732 aaPredicted RBP23.59■■□□□ 1.37
DDX39A-216ENST00000591275 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
DDX39A-216ENST00000591275 BAG6P46379 1132 aa23.58■■□□□ 1.37
DDX39A-216ENST00000591275 LRP5O75197 1615 aa23.57■■□□□ 1.36
DDX39A-216ENST00000591275 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
DDX39A-216ENST00000591275 FAM182BQ5T319 152 aa23.56■■□□□ 1.36
DDX39A-216ENST00000591275 TRAK1Q9UPV9 953 aa23.56■■□□□ 1.36
DDX39A-216ENST00000591275 MINK1Q8N4C8 1332 aaPredicted RBP23.56■■□□□ 1.36
DDX39A-216ENST00000591275 ALS2Q96Q42 1657 aa23.55■■□□□ 1.36
DDX39A-216ENST00000591275 PRR36Q9H6K5 1346 aa23.55■■□□□ 1.36
DDX39A-216ENST00000591275 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
DDX39A-216ENST00000591275 COL14A1Q05707 1796 aaKnown RBP23.54■■□□□ 1.36
DDX39A-216ENST00000591275 ADGRB1O14514 1584 aa23.53■■□□□ 1.36
DDX39A-216ENST00000591275 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 373.3 ms