RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 SLC24A1O60721 1099 aa24.04■■□□□ 1.44
RPRD1A-209ENST00000590898 ADGRL3Q9HAR2 1447 aa24.03■■□□□ 1.44
RPRD1A-209ENST00000590898 C14orf37Q86TY3 774 aa24.03■■□□□ 1.44
RPRD1A-209ENST00000590898 ST20-MTHFSA0A0A6YYL1 179 aa24.02■■□□□ 1.44
RPRD1A-209ENST00000590898 SAFB2Q14151 953 aaKnown RBP eCLIP24.02■■□□□ 1.44
RPRD1A-209ENST00000590898 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
RPRD1A-209ENST00000590898 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
RPRD1A-209ENST00000590898 QRICH2Q9H0J4 1663 aa24.01■■□□□ 1.43
RPRD1A-209ENST00000590898 MSH6P52701 1360 aa24.01■■□□□ 1.43
RPRD1A-209ENST00000590898 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
RPRD1A-209ENST00000590898 DCCP43146 1447 aa23.99■■□□□ 1.43
RPRD1A-209ENST00000590898 ADGRB2O60241 1585 aa23.98■■□□□ 1.43
RPRD1A-209ENST00000590898 MINK1Q8N4C8 1332 aaPredicted RBP23.98■■□□□ 1.43
RPRD1A-209ENST00000590898 CADPS2Q86UW7 1296 aa23.97■■□□□ 1.43
RPRD1A-209ENST00000590898 HSPA5P11021 654 aaKnown RBP23.96■■□□□ 1.43
RPRD1A-209ENST00000590898 TESK2Q96S53 571 aa23.96■■□□□ 1.43
RPRD1A-209ENST00000590898 ATF3P18847 181 aa23.96■■□□□ 1.43
RPRD1A-209ENST00000590898 CDC42BPGQ6DT37 1551 aa23.95■■□□□ 1.42
RPRD1A-209ENST00000590898 WASLO00401 505 aaPredicted RBP23.94■■□□□ 1.42
RPRD1A-209ENST00000590898 HIRIP3Q9BW71 556 aaPredicted RBP23.94■■□□□ 1.42
RPRD1A-209ENST00000590898 EVC2Q86UK5 1308 aa23.92■■□□□ 1.42
RPRD1A-209ENST00000590898 CDK19Q9BWU1 502 aa23.9■■□□□ 1.42
RPRD1A-209ENST00000590898 FMN2Q9NZ56 1722 aa23.89■■□□□ 1.41
RPRD1A-209ENST00000590898 TOM1O60784 492 aa23.88■■□□□ 1.41
RPRD1A-209ENST00000590898 TMF1P82094 1093 aa23.88■■□□□ 1.41
RPRD1A-209ENST00000590898 PUS7Q96PZ0 661 aaKnown RBP23.88■■□□□ 1.41
RPRD1A-209ENST00000590898 TULP4Q9NRJ4 1543 aa23.87■■□□□ 1.41
RPRD1A-209ENST00000590898 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
RPRD1A-209ENST00000590898 CDCA8Q53HL2 280 aa23.85■■□□□ 1.41
RPRD1A-209ENST00000590898 MST1RQ04912 1400 aa23.85■■□□□ 1.41
RPRD1A-209ENST00000590898 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
RPRD1A-209ENST00000590898 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
RPRD1A-209ENST00000590898 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.4
RPRD1A-209ENST00000590898 UBAP1LF5GYI3 381 aa23.82■■□□□ 1.4
RPRD1A-209ENST00000590898 NUDT16Q96DE0 195 aaKnown RBP23.82■■□□□ 1.4
RPRD1A-209ENST00000590898 C1orf167Q5SNV9 1468 aa23.82■■□□□ 1.4
RPRD1A-209ENST00000590898 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
RPRD1A-209ENST00000590898 CCDC61Q9Y6R9 512 aa23.8■■□□□ 1.4
RPRD1A-209ENST00000590898 DISP3Q9P2K9 1392 aa23.8■■□□□ 1.4
RPRD1A-209ENST00000590898 NUTM2FA1L443 756 aa23.8■■□□□ 1.4
RPRD1A-209ENST00000590898 USP32Q8NFA0 1604 aa23.8■■□□□ 1.4
RPRD1A-209ENST00000590898 PRR36Q9H6K5 1346 aa23.79■■□□□ 1.4
RPRD1A-209ENST00000590898 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
RPRD1A-209ENST00000590898 ATP7BP35670 1465 aa23.78■■□□□ 1.4
RPRD1A-209ENST00000590898 ITSN1Q15811 1721 aa23.78■■□□□ 1.4
RPRD1A-209ENST00000590898 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
RPRD1A-209ENST00000590898 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
RPRD1A-209ENST00000590898 ORAI2Q96SN7 254 aa23.74■■□□□ 1.39
RPRD1A-209ENST00000590898 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
RPRD1A-209ENST00000590898 C11orf95C9JLR9 678 aaPredicted RBP23.74■■□□□ 1.39
RPRD1A-209ENST00000590898 BRINP3Q76B58 766 aa23.74■■□□□ 1.39
RPRD1A-209ENST00000590898 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
RPRD1A-209ENST00000590898 PHF8Q9UPP1 1060 aa23.72■■□□□ 1.39
RPRD1A-209ENST00000590898 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
RPRD1A-209ENST00000590898 KIF1AQ12756 1690 aa23.71■■□□□ 1.39
RPRD1A-209ENST00000590898 ROBO1Q9Y6N7 1651 aa23.71■■□□□ 1.39
RPRD1A-209ENST00000590898 CABP1Q9NZU7 370 aa23.71■■□□□ 1.39
RPRD1A-209ENST00000590898 PPIP5K1Q6PFW1 1433 aa23.7■■□□□ 1.39
RPRD1A-209ENST00000590898 PIP4K2BP78356 416 aa23.7■■□□□ 1.38
RPRD1A-209ENST00000590898 KIF7Q2M1P5 1343 aa23.68■■□□□ 1.38
RPRD1A-209ENST00000590898 PMFBP1Q8TBY8 1022 aa23.67■■□□□ 1.38
RPRD1A-209ENST00000590898 TMC1Q8TDI8 760 aa23.67■■□□□ 1.38
RPRD1A-209ENST00000590898 SLC12A5Q9H2X9 1139 aa23.67■■□□□ 1.38
RPRD1A-209ENST00000590898 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
RPRD1A-209ENST00000590898 NGDNQ8NEJ9 315 aaKnown RBP23.66■■□□□ 1.38
RPRD1A-209ENST00000590898 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
RPRD1A-209ENST00000590898 CCDC7Q96M83 1385 aa23.66■■□□□ 1.38
RPRD1A-209ENST00000590898 FOXO3O43524 673 aa23.65■■□□□ 1.38
RPRD1A-209ENST00000590898 FBXO41Q8TF61 875 aa23.65■■□□□ 1.38
RPRD1A-209ENST00000590898 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
RPRD1A-209ENST00000590898 ACEP12821 1306 aa23.65■■□□□ 1.38
RPRD1A-209ENST00000590898 NPHP3Q7Z494 1330 aa23.65■■□□□ 1.38
RPRD1A-209ENST00000590898 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
RPRD1A-209ENST00000590898 NHSL1Q5SYE7 1610 aa23.64■■□□□ 1.37
RPRD1A-209ENST00000590898 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
RPRD1A-209ENST00000590898 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
RPRD1A-209ENST00000590898 CPSF1Q10570 1443 aaKnown RBP23.62■■□□□ 1.37
RPRD1A-209ENST00000590898 MYOM1P52179 1685 aa23.62■■□□□ 1.37
RPRD1A-209ENST00000590898 AHDC1Q5TGY3 1603 aaPredicted RBP23.61■■□□□ 1.37
RPRD1A-209ENST00000590898 PSME1Q06323 249 aa23.61■■□□□ 1.37
RPRD1A-209ENST00000590898 AKAP12Q02952 1782 aa23.61■■□□□ 1.37
RPRD1A-209ENST00000590898 HDGFL2Q7Z4V5 671 aaPredicted RBP23.6■■□□□ 1.37
RPRD1A-209ENST00000590898 BRD4O60885 1362 aaPredicted RBP23.6■■□□□ 1.37
RPRD1A-209ENST00000590898 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
RPRD1A-209ENST00000590898 CD163L1Q9NR16 1453 aa23.59■■□□□ 1.37
RPRD1A-209ENST00000590898 KRT28Q7Z3Y7 464 aa23.59■■□□□ 1.37
RPRD1A-209ENST00000590898 ANKRD36BQ8N2N9 1353 aa23.58■■□□□ 1.37
RPRD1A-209ENST00000590898 DIEXFQ68CQ4 756 aaKnown RBP23.57■■□□□ 1.36
RPRD1A-209ENST00000590898 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
RPRD1A-209ENST00000590898 PXDNQ92626 1479 aa23.55■■□□□ 1.36
RPRD1A-209ENST00000590898 A0A1W2PP64 1363 aa23.55■■□□□ 1.36
RPRD1A-209ENST00000590898 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
RPRD1A-209ENST00000590898 PHLPP1O60346 1717 aa23.55■■□□□ 1.36
RPRD1A-209ENST00000590898 MON2Q7Z3U7 1717 aa23.55■■□□□ 1.36
RPRD1A-209ENST00000590898 USP6P35125 1406 aa23.55■■□□□ 1.36
RPRD1A-209ENST00000590898 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
RPRD1A-209ENST00000590898 LRRC59Q96AG4 307 aaKnown RBP23.53■■□□□ 1.36
RPRD1A-209ENST00000590898 PANK3Q9H999 370 aa23.53■■□□□ 1.36
RPRD1A-209ENST00000590898 SSH2Q76I76 1423 aa23.52■■□□□ 1.36
RPRD1A-209ENST00000590898 TRPM3Q9HCF6 1732 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms