RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 DCCP43146 1447 aa30.14■■■□□ 2.42
CIRBP-229ENST00000590704 ROCK2O75116 1388 aaKnown RBP30.13■■■□□ 2.41
CIRBP-229ENST00000590704 C14orf37Q86TY3 774 aa30.12■■■□□ 2.41
CIRBP-229ENST00000590704 SAFB2Q14151 953 aaKnown RBP eCLIP30.12■■■□□ 2.41
CIRBP-229ENST00000590704 SLAIN2Q9P270 581 aa30.11■■■□□ 2.41
CIRBP-229ENST00000590704 CADPS2Q86UW7 1296 aa30.1■■■□□ 2.41
CIRBP-229ENST00000590704 MST1RQ04912 1400 aa30.09■■■□□ 2.41
CIRBP-229ENST00000590704 ATF3P18847 181 aa30.06■■■□□ 2.4
CIRBP-229ENST00000590704 PIP4K2BP78356 416 aa30.06■■■□□ 2.4
CIRBP-229ENST00000590704 POGKQ9P215 609 aa30.06■■■□□ 2.4
CIRBP-229ENST00000590704 CDC42BPGQ6DT37 1551 aa30.05■■■□□ 2.4
CIRBP-229ENST00000590704 CARD11Q9BXL7 1154 aa30.04■■■□□ 2.4
CIRBP-229ENST00000590704 MINK1Q8N4C8 1332 aaPredicted RBP30.02■■■□□ 2.4
CIRBP-229ENST00000590704 C1orf167Q5SNV9 1468 aa30.02■■■□□ 2.4
CIRBP-229ENST00000590704 ADGRB2O60241 1585 aa30.01■■■□□ 2.4
CIRBP-229ENST00000590704 HIRIP3Q9BW71 556 aaPredicted RBP30.01■■■□□ 2.4
CIRBP-229ENST00000590704 CENPJQ9HC77 1338 aaPredicted RBP29.99■■■□□ 2.39
CIRBP-229ENST00000590704 BRINP3Q76B58 766 aa29.98■■■□□ 2.39
CIRBP-229ENST00000590704 FMN2Q9NZ56 1722 aa29.97■■■□□ 2.39
CIRBP-229ENST00000590704 ROBO1Q9Y6N7 1651 aa29.97■■■□□ 2.39
CIRBP-229ENST00000590704 ORAI2Q96SN7 254 aa29.96■■■□□ 2.39
CIRBP-229ENST00000590704 WASLO00401 505 aaPredicted RBP29.95■■■□□ 2.39
CIRBP-229ENST00000590704 PRR36Q9H6K5 1346 aa29.94■■■□□ 2.38
CIRBP-229ENST00000590704 NUTM2FA1L443 756 aa29.93■■■□□ 2.38
CIRBP-229ENST00000590704 USP32Q8NFA0 1604 aa29.93■■■□□ 2.38
CIRBP-229ENST00000590704 SCAF1Q9H7N4 1312 aaKnown RBP29.93■■■□□ 2.38
CIRBP-229ENST00000590704 QRICH2Q9H0J4 1663 aa29.92■■■□□ 2.38
CIRBP-229ENST00000590704 HSPA1LP34931 641 aa29.92■■■□□ 2.38
CIRBP-229ENST00000590704 RGPD8O14715 1765 aaPredicted RBP29.91■■■□□ 2.38
CIRBP-229ENST00000590704 TESK2Q96S53 571 aa29.89■■■□□ 2.38
CIRBP-229ENST00000590704 CDK19Q9BWU1 502 aa29.89■■■□□ 2.38
CIRBP-229ENST00000590704 TULP4Q9NRJ4 1543 aa29.88■■■□□ 2.37
CIRBP-229ENST00000590704 ST20-MTHFSA0A0A6YYL1 179 aa29.87■■■□□ 2.37
CIRBP-229ENST00000590704 DDX17Q92841 729 aaKnown RBP29.87■■■□□ 2.37
CIRBP-229ENST00000590704 SBNO2Q9Y2G9 1366 aa29.87■■■□□ 2.37
CIRBP-229ENST00000590704 EIF3AQ14152 1382 aaKnown RBP29.84■■■□□ 2.37
CIRBP-229ENST00000590704 USP47Q96K76 1375 aa29.84■■■□□ 2.37
CIRBP-229ENST00000590704 ANKARQ7Z5J8 1434 aa29.84■■■□□ 2.37
CIRBP-229ENST00000590704 ESCO1Q5FWF5 840 aa29.83■■■□□ 2.37
CIRBP-229ENST00000590704 ATP7BP35670 1465 aa29.83■■■□□ 2.37
CIRBP-229ENST00000590704 AHDC1Q5TGY3 1603 aaPredicted RBP29.81■■■□□ 2.36
CIRBP-229ENST00000590704 NUDT16Q96DE0 195 aaKnown RBP29.81■■■□□ 2.36
CIRBP-229ENST00000590704 NHSL1Q5SYE7 1610 aa29.8■■■□□ 2.36
CIRBP-229ENST00000590704 CABP2Q9NPB3 220 aa29.8■■■□□ 2.36
CIRBP-229ENST00000590704 COL16A1Q07092 1604 aaPredicted RBP29.77■■■□□ 2.36
CIRBP-229ENST00000590704 SOS2Q07890 1332 aaPredicted RBP29.75■■■□□ 2.35
CIRBP-229ENST00000590704 FOXO3O43524 673 aa29.75■■■□□ 2.35
CIRBP-229ENST00000590704 PHF8Q9UPP1 1060 aa29.75■■■□□ 2.35
CIRBP-229ENST00000590704 DISP3Q9P2K9 1392 aa29.75■■■□□ 2.35
CIRBP-229ENST00000590704 EVC2Q86UK5 1308 aa29.74■■■□□ 2.35
CIRBP-229ENST00000590704 PMFBP1Q8TBY8 1022 aa29.74■■■□□ 2.35
CIRBP-229ENST00000590704 PHLPP1O60346 1717 aa29.73■■■□□ 2.35
CIRBP-229ENST00000590704 CCDC61Q9Y6R9 512 aa29.73■■■□□ 2.35
CIRBP-229ENST00000590704 TOPAZ1Q8N9V7 1692 aa29.72■■■□□ 2.35
CIRBP-229ENST00000590704 PXDNQ92626 1479 aa29.72■■■□□ 2.35
CIRBP-229ENST00000590704 PLEKHG3A1L390 1219 aa29.71■■■□□ 2.35
CIRBP-229ENST00000590704 HSPA5P11021 654 aaKnown RBP29.71■■■□□ 2.35
CIRBP-229ENST00000590704 SRPK2P78362 688 aaKnown RBP29.71■■■□□ 2.35
CIRBP-229ENST00000590704 KIF1AQ12756 1690 aa29.68■■■□□ 2.34
CIRBP-229ENST00000590704 XPCQ01831 940 aaPredicted RBP29.68■■■□□ 2.34
CIRBP-229ENST00000590704 EIF4G2P78344 907 aaKnown RBP eCLIP29.67■■■□□ 2.34
CIRBP-229ENST00000590704 NPHP3Q7Z494 1330 aa29.66■■■□□ 2.34
CIRBP-229ENST00000590704 PUS7Q96PZ0 661 aaKnown RBP29.65■■■□□ 2.34
CIRBP-229ENST00000590704 POLR3AO14802 1390 aaPredicted RBP29.65■■■□□ 2.34
CIRBP-229ENST00000590704 CABP1Q9NZU7 370 aa29.64■■■□□ 2.34
CIRBP-229ENST00000590704 KRT28Q7Z3Y7 464 aa29.63■■■□□ 2.33
CIRBP-229ENST00000590704 PPIP5K1Q6PFW1 1433 aa29.63■■■□□ 2.33
CIRBP-229ENST00000590704 ACEP12821 1306 aa29.63■■■□□ 2.33
CIRBP-229ENST00000590704 ITSN1Q15811 1721 aa29.63■■■□□ 2.33
CIRBP-229ENST00000590704 C11orf95C9JLR9 678 aaPredicted RBP29.6■■■□□ 2.33
CIRBP-229ENST00000590704 LRRC59Q96AG4 307 aaKnown RBP29.6■■■□□ 2.33
CIRBP-229ENST00000590704 ATAD2Q6PL18 1390 aa29.58■■■□□ 2.33
CIRBP-229ENST00000590704 TRPM3Q9HCF6 1732 aaPredicted RBP29.58■■■□□ 2.33
CIRBP-229ENST00000590704 CD163L1Q9NR16 1453 aa29.57■■■□□ 2.32
CIRBP-229ENST00000590704 SLC24A1O60721 1099 aa29.57■■■□□ 2.32
CIRBP-229ENST00000590704 TMF1P82094 1093 aa29.57■■■□□ 2.32
CIRBP-229ENST00000590704 SPATA31A3Q5VYP0 1347 aa29.57■■■□□ 2.32
CIRBP-229ENST00000590704 JCADQ9P266 1359 aa29.57■■■□□ 2.32
CIRBP-229ENST00000590704 NGDNQ8NEJ9 315 aaKnown RBP29.56■■■□□ 2.32
CIRBP-229ENST00000590704 SLC12A5Q9H2X9 1139 aa29.56■■■□□ 2.32
CIRBP-229ENST00000590704 PNPLA6Q8IY17 1366 aa29.56■■■□□ 2.32
CIRBP-229ENST00000590704 PSME1Q06323 249 aa29.55■■■□□ 2.32
CIRBP-229ENST00000590704 CPSF1Q10570 1443 aaKnown RBP29.55■■■□□ 2.32
CIRBP-229ENST00000590704 SBNO1A3KN83 1393 aa29.54■■■□□ 2.32
CIRBP-229ENST00000590704 SSH2Q76I76 1423 aa29.54■■■□□ 2.32
CIRBP-229ENST00000590704 SHPRHQ149N8 1683 aa29.53■■■□□ 2.32
CIRBP-229ENST00000590704 ILDR2Q71H61 639 aa29.52■■■□□ 2.32
CIRBP-229ENST00000590704 ALS2Q96Q42 1657 aa29.49■■■□□ 2.31
CIRBP-229ENST00000590704 USP6P35125 1406 aa29.47■■■□□ 2.31
CIRBP-229ENST00000590704 TNS3Q68CZ2 1445 aa29.47■■■□□ 2.31
CIRBP-229ENST00000590704 AKAP12Q02952 1782 aa29.47■■■□□ 2.31
CIRBP-229ENST00000590704 LRP6O75581 1613 aa29.46■■■□□ 2.31
CIRBP-229ENST00000590704 COL22A1Q8NFW1 1626 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-229ENST00000590704 TMC1Q8TDI8 760 aa29.44■■■□□ 2.3
CIRBP-229ENST00000590704 ZNF692Q9BU19 519 aaPredicted RBP29.43■■■□□ 2.3
CIRBP-229ENST00000590704 SPATA31A6Q5VVP1 1343 aa29.43■■■□□ 2.3
CIRBP-229ENST00000590704 MYOM1P52179 1685 aa29.42■■■□□ 2.3
CIRBP-229ENST00000590704 A0A1W2PP64 1363 aa29.42■■■□□ 2.3
CIRBP-229ENST00000590704 CDCA8Q53HL2 280 aa29.41■■■□□ 2.3
CIRBP-229ENST00000590704 NINLQ9Y2I6 1382 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms