RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 KHSRPQ92945 711 aaKnown RBP eCLIP9.08□□□□□ -0.967e-7■■□□□ 14.1
PIK3C3-211ENST00000589550 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
PIK3C3-211ENST00000589550 FDX1P10109 184 aa9.07□□□□□ -0.96
PIK3C3-211ENST00000589550 KCNA1Q09470 495 aa9.07□□□□□ -0.96
PIK3C3-211ENST00000589550 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
PIK3C3-211ENST00000589550 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
PIK3C3-211ENST00000589550 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
PIK3C3-211ENST00000589550 BRD1O95696 1058 aa9.06□□□□□ -0.96
PIK3C3-211ENST00000589550 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
PIK3C3-211ENST00000589550 GCGRP47871 477 aa9.06□□□□□ -0.96
PIK3C3-211ENST00000589550 MFAP1P55081 439 aaKnown RBP9.06□□□□□ -0.96
PIK3C3-211ENST00000589550 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
PIK3C3-211ENST00000589550 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
PIK3C3-211ENST00000589550 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
PIK3C3-211ENST00000589550 ADAMTS19Q8TE59 1207 aa9.04□□□□□ -0.96
PIK3C3-211ENST00000589550 SOX11P35716 441 aa9.03□□□□□ -0.96
PIK3C3-211ENST00000589550 MTMR2Q13614 643 aa9.03□□□□□ -0.96
PIK3C3-211ENST00000589550 PPP1R12CQ9BZL4 782 aa9.03□□□□□ -0.96
PIK3C3-211ENST00000589550 TRIM34Q9BYJ4 488 aa9.02□□□□□ -0.97
PIK3C3-211ENST00000589550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 GPR37L1O60883 481 aa9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 SRPK2P78362 688 aaKnown RBP9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 CTDSPL2Q05D32 466 aa9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 HMX1Q9NP08 348 aaPredicted RBP9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 MTMR7Q9Y216 660 aa9.01□□□□□ -0.97
PIK3C3-211ENST00000589550 RFX1P22670 979 aa9□□□□□ -0.97
PIK3C3-211ENST00000589550 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
PIK3C3-211ENST00000589550 KCNH8Q96L42 1107 aa9□□□□□ -0.97
PIK3C3-211ENST00000589550 ALG2Q9H553 416 aa9□□□□□ -0.97
PIK3C3-211ENST00000589550 SMAPO00193 183 aa8.99□□□□□ -0.97
PIK3C3-211ENST00000589550 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
PIK3C3-211ENST00000589550 VAC14Q08AM6 782 aa8.99□□□□□ -0.97
PIK3C3-211ENST00000589550 PALM3A6NDB9 673 aaPredicted RBP8.97□□□□□ -0.97
PIK3C3-211ENST00000589550 SLC10A3P09131 477 aa8.96□□□□□ -0.98
PIK3C3-211ENST00000589550 GUCA2AQ02747 115 aa8.96□□□□□ -0.98
PIK3C3-211ENST00000589550 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
PIK3C3-211ENST00000589550 PNMA1Q8ND90 353 aa8.96□□□□□ -0.98
PIK3C3-211ENST00000589550 LRRN4Q8WUT4 740 aa8.96□□□□□ -0.98
PIK3C3-211ENST00000589550 TSC1Q92574 1164 aa8.96□□□□□ -0.98
PIK3C3-211ENST00000589550 C6orf229H3BNL8 230 aa8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 ATG7O95352 703 aa8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 LMOD1P29536 600 aaPredicted RBP8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 PBX2P40425 430 aa8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 SWT1Q5T5J6 900 aaKnown RBP8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 KIAA1468Q9P260 1216 aa8.95□□□□□ -0.98
PIK3C3-211ENST00000589550 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
PIK3C3-211ENST00000589550 LSM11P83369 360 aaKnown RBP eCLIP8.94□□□□□ -0.98
PIK3C3-211ENST00000589550 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
PIK3C3-211ENST00000589550 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
PIK3C3-211ENST00000589550 ANKRD13DQ6ZTN6 518 aa8.93□□□□□ -0.98
PIK3C3-211ENST00000589550 HLA-CQ95604 372 aa8.93□□□□□ -0.98
PIK3C3-211ENST00000589550 UCN2Q96RP3 112 aa8.93□□□□□ -0.98
PIK3C3-211ENST00000589550 ZBED2Q9BTP6 218 aa8.93□□□□□ -0.98
PIK3C3-211ENST00000589550 TFIP11Q9UBB9 837 aaKnown RBP8.93□□□□□ -0.98
PIK3C3-211ENST00000589550 PRR7Q8TB68 274 aa8.92□□□□□ -0.98
PIK3C3-211ENST00000589550 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
PIK3C3-211ENST00000589550 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
PIK3C3-211ENST00000589550 VRTNQ9H8Y1 702 aa8.91□□□□□ -0.98
PIK3C3-211ENST00000589550 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
PIK3C3-211ENST00000589550 MAFBQ9Y5Q3 323 aaPredicted RBP8.91□□□□□ -0.98
PIK3C3-211ENST00000589550 FUT2Q10981 343 aa8.9□□□□□ -0.98
PIK3C3-211ENST00000589550 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
PIK3C3-211ENST00000589550 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
PIK3C3-211ENST00000589550 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 RBM25P49756 843 aaKnown RBP8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 CCDC27Q2M243 656 aa8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 SND1Q7KZF4 910 aaKnown RBP eCLIP8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 EPS8L1Q8TE68 723 aa8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 IVNS1ABPQ9Y6Y0 642 aa8.89□□□□□ -0.99
PIK3C3-211ENST00000589550 TMEM88BA6NKF7 163 aa8.88□□□□□ -0.99
PIK3C3-211ENST00000589550 ATP9BO43861 1147 aa8.88□□□□□ -0.99
PIK3C3-211ENST00000589550 NR6A1Q15406 480 aa8.88□□□□□ -0.99
PIK3C3-211ENST00000589550 DESI1Q6ICB0 168 aa8.88□□□□□ -0.99
PIK3C3-211ENST00000589550 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
PIK3C3-211ENST00000589550 AMOTL2Q9Y2J4 779 aa8.88□□□□□ -0.99
PIK3C3-211ENST00000589550 CFHP08603 1231 aa8.87□□□□□ -0.99
PIK3C3-211ENST00000589550 FAM98CQ17RN3 349 aaKnown RBP8.87□□□□□ -0.99
PIK3C3-211ENST00000589550 NR1H3Q13133 447 aa8.86□□□□□ -0.99
PIK3C3-211ENST00000589550 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
PIK3C3-211ENST00000589550 KMT5BQ4FZB7 885 aa8.86□□□□□ -0.99
PIK3C3-211ENST00000589550 GNEQ9Y223 722 aaKnown RBP8.86□□□□□ -0.99
PIK3C3-211ENST00000589550 Q3C1V9 767 aa8.85□□□□□ -0.99
PIK3C3-211ENST00000589550 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
PIK3C3-211ENST00000589550 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
PIK3C3-211ENST00000589550 E9PSI1 815 aa8.84□□□□□ -0.99
PIK3C3-211ENST00000589550 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
PIK3C3-211ENST00000589550 HCSTQ9UBK5 93 aa8.84□□□□□ -0.99
PIK3C3-211ENST00000589550 CARNS1A5YM72 827 aa8.83□□□□□ -1
PIK3C3-211ENST00000589550 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
PIK3C3-211ENST00000589550 SYMPKQ92797 1274 aaKnown RBP8.83□□□□□ -1
PIK3C3-211ENST00000589550 PER1O15534 1290 aaPredicted RBP8.82□□□□□ -1
PIK3C3-211ENST00000589550 CDCA8Q53HL2 280 aa8.82□□□□□ -1
PIK3C3-211ENST00000589550 ZC3H4Q9UPT8 1303 aaKnown RBP8.81□□□□□ -1
PIK3C3-211ENST00000589550 ZBBXA8MT70 800 aa8.81□□□□□ -1
PIK3C3-211ENST00000589550 ARHGAP33O14559 1287 aa8.81□□□□□ -1
PIK3C3-211ENST00000589550 PSEN2P49810 448 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms