RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CDCA8Q53HL2 280 aa23.73■■□□□ 1.39
SCAMP4-211ENST00000588907 TESK2Q96S53 571 aa23.73■■□□□ 1.39
SCAMP4-211ENST00000588907 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
SCAMP4-211ENST00000588907 LTBP4Q8N2S1 1624 aa23.73■■□□□ 1.39
SCAMP4-211ENST00000588907 EVC2Q86UK5 1308 aa23.72■■□□□ 1.39
SCAMP4-211ENST00000588907 TMEM94Q12767 1356 aa23.72■■□□□ 1.39
SCAMP4-211ENST00000588907 DCCP43146 1447 aa23.71■■□□□ 1.39
SCAMP4-211ENST00000588907 SAFB2Q14151 953 aaKnown RBP eCLIP23.71■■□□□ 1.39
SCAMP4-211ENST00000588907 NALCNQ8IZF0 1738 aa23.7■■□□□ 1.39
SCAMP4-211ENST00000588907 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.7■■□□□ 1.39
SCAMP4-211ENST00000588907 CDC42BPGQ6DT37 1551 aa23.7■■□□□ 1.38
SCAMP4-211ENST00000588907 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
SCAMP4-211ENST00000588907 MINK1Q8N4C8 1332 aaPredicted RBP23.68■■□□□ 1.38
SCAMP4-211ENST00000588907 PUS7Q96PZ0 661 aaKnown RBP23.68■■□□□ 1.38
SCAMP4-211ENST00000588907 MSH6P52701 1360 aa23.67■■□□□ 1.38
SCAMP4-211ENST00000588907 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
SCAMP4-211ENST00000588907 TULP4Q9NRJ4 1543 aa23.65■■□□□ 1.38
SCAMP4-211ENST00000588907 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
SCAMP4-211ENST00000588907 IQSEC2Q5JU85 1478 aa23.64■■□□□ 1.38
SCAMP4-211ENST00000588907 WASLO00401 505 aaPredicted RBP23.64■■□□□ 1.37
SCAMP4-211ENST00000588907 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
SCAMP4-211ENST00000588907 ATAD2Q6PL18 1390 aa23.62■■□□□ 1.37
SCAMP4-211ENST00000588907 DISP3Q9P2K9 1392 aa23.62■■□□□ 1.37
SCAMP4-211ENST00000588907 ANKARQ7Z5J8 1434 aa23.61■■□□□ 1.37
SCAMP4-211ENST00000588907 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
SCAMP4-211ENST00000588907 FMN2Q9NZ56 1722 aa23.61■■□□□ 1.37
SCAMP4-211ENST00000588907 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
SCAMP4-211ENST00000588907 ATF3P18847 181 aa23.6■■□□□ 1.37
SCAMP4-211ENST00000588907 SRPK2P78362 688 aaKnown RBP23.6■■□□□ 1.37
SCAMP4-211ENST00000588907 CDK19Q9BWU1 502 aa23.6■■□□□ 1.37
SCAMP4-211ENST00000588907 NINLQ9Y2I6 1382 aa23.59■■□□□ 1.37
SCAMP4-211ENST00000588907 RBM33Q96EV2 1170 aaKnown RBP23.58■■□□□ 1.37
SCAMP4-211ENST00000588907 ITSN1Q15811 1721 aa23.57■■□□□ 1.36
SCAMP4-211ENST00000588907 KIF7Q2M1P5 1343 aa23.56■■□□□ 1.36
SCAMP4-211ENST00000588907 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
SCAMP4-211ENST00000588907 ATP7BP35670 1465 aa23.55■■□□□ 1.36
SCAMP4-211ENST00000588907 CABP2Q9NPB3 220 aa23.53■■□□□ 1.36
SCAMP4-211ENST00000588907 CCDC61Q9Y6R9 512 aa23.52■■□□□ 1.36
SCAMP4-211ENST00000588907 WASHC2AQ641Q2 1341 aa23.52■■□□□ 1.36
SCAMP4-211ENST00000588907 TOPAZ1Q8N9V7 1692 aa23.51■■□□□ 1.35
SCAMP4-211ENST00000588907 NUDT16Q96DE0 195 aaKnown RBP23.51■■□□□ 1.35
SCAMP4-211ENST00000588907 MST1RQ04912 1400 aa23.5■■□□□ 1.35
SCAMP4-211ENST00000588907 C11orf95C9JLR9 678 aaPredicted RBP23.5■■□□□ 1.35
SCAMP4-211ENST00000588907 USP32Q8NFA0 1604 aa23.49■■□□□ 1.35
SCAMP4-211ENST00000588907 C1orf167Q5SNV9 1468 aa23.48■■□□□ 1.35
SCAMP4-211ENST00000588907 CERKQ8TCT0 537 aa23.47■■□□□ 1.35
SCAMP4-211ENST00000588907 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
SCAMP4-211ENST00000588907 PPIP5K1Q6PFW1 1433 aa23.47■■□□□ 1.35
SCAMP4-211ENST00000588907 KIF1AQ12756 1690 aa23.47■■□□□ 1.35
SCAMP4-211ENST00000588907 MYOM1P52179 1685 aa23.46■■□□□ 1.35
SCAMP4-211ENST00000588907 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
SCAMP4-211ENST00000588907 TOM1O60784 492 aa23.44■■□□□ 1.34
SCAMP4-211ENST00000588907 SLAIN2Q9P270 581 aa23.44■■□□□ 1.34
SCAMP4-211ENST00000588907 RGPD8O14715 1765 aaPredicted RBP23.43■■□□□ 1.34
SCAMP4-211ENST00000588907 PLEKHG3A1L390 1219 aa23.43■■□□□ 1.34
SCAMP4-211ENST00000588907 TMC1Q8TDI8 760 aa23.43■■□□□ 1.34
SCAMP4-211ENST00000588907 TERF2IPQ9NYB0 399 aa23.43■■□□□ 1.34
SCAMP4-211ENST00000588907 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
SCAMP4-211ENST00000588907 ANKRD36BQ8N2N9 1353 aa23.41■■□□□ 1.34
SCAMP4-211ENST00000588907 ESCO1Q5FWF5 840 aa23.4■■□□□ 1.34
SCAMP4-211ENST00000588907 HDGFL2Q7Z4V5 671 aaPredicted RBP23.4■■□□□ 1.34
SCAMP4-211ENST00000588907 CABP1Q9NZU7 370 aa23.4■■□□□ 1.34
SCAMP4-211ENST00000588907 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
SCAMP4-211ENST00000588907 POLR3AO14802 1390 aaPredicted RBP23.4■■□□□ 1.34
SCAMP4-211ENST00000588907 ZNF692Q9BU19 519 aaPredicted RBP23.39■■□□□ 1.33
SCAMP4-211ENST00000588907 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
SCAMP4-211ENST00000588907 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
SCAMP4-211ENST00000588907 SLC12A5Q9H2X9 1139 aa23.37■■□□□ 1.33
SCAMP4-211ENST00000588907 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
SCAMP4-211ENST00000588907 NGDNQ8NEJ9 315 aaKnown RBP23.36■■□□□ 1.33
SCAMP4-211ENST00000588907 A0A1W2PP64 1363 aa23.35■■□□□ 1.33
SCAMP4-211ENST00000588907 ACEP12821 1306 aa23.34■■□□□ 1.33
SCAMP4-211ENST00000588907 CD163L1Q9NR16 1453 aa23.34■■□□□ 1.33
SCAMP4-211ENST00000588907 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
SCAMP4-211ENST00000588907 MON2Q7Z3U7 1717 aa23.33■■□□□ 1.33
SCAMP4-211ENST00000588907 UBAP1LF5GYI3 381 aa23.33■■□□□ 1.33
SCAMP4-211ENST00000588907 BRINP3Q76B58 766 aa23.33■■□□□ 1.33
SCAMP4-211ENST00000588907 ORAI2Q96SN7 254 aa23.33■■□□□ 1.33
SCAMP4-211ENST00000588907 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
SCAMP4-211ENST00000588907 PMFBP1Q8TBY8 1022 aa23.32■■□□□ 1.32
SCAMP4-211ENST00000588907 PANK3Q9H999 370 aa23.32■■□□□ 1.32
SCAMP4-211ENST00000588907 EDC4Q6P2E9 1401 aaKnown RBP23.32■■□□□ 1.32
SCAMP4-211ENST00000588907 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
SCAMP4-211ENST00000588907 USP6P35125 1406 aa23.31■■□□□ 1.32
SCAMP4-211ENST00000588907 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
SCAMP4-211ENST00000588907 NHSL1Q5SYE7 1610 aa23.3■■□□□ 1.32
SCAMP4-211ENST00000588907 PSME1Q06323 249 aa23.28■■□□□ 1.32
SCAMP4-211ENST00000588907 NRKQ7Z2Y5 1582 aa23.27■■□□□ 1.32
SCAMP4-211ENST00000588907 AHDC1Q5TGY3 1603 aaPredicted RBP23.27■■□□□ 1.32
SCAMP4-211ENST00000588907 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
SCAMP4-211ENST00000588907 NSD3Q9BZ95 1437 aa23.26■■□□□ 1.31
SCAMP4-211ENST00000588907 FOXO3O43524 673 aa23.26■■□□□ 1.31
SCAMP4-211ENST00000588907 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
SCAMP4-211ENST00000588907 CGNL1Q0VF96 1302 aa23.25■■□□□ 1.31
SCAMP4-211ENST00000588907 SBNO1A3KN83 1393 aa23.24■■□□□ 1.31
SCAMP4-211ENST00000588907 NSD2O96028 1365 aa23.24■■□□□ 1.31
SCAMP4-211ENST00000588907 SSH2Q76I76 1423 aa23.24■■□□□ 1.31
SCAMP4-211ENST00000588907 PXDNQ92626 1479 aa23.24■■□□□ 1.31
SCAMP4-211ENST00000588907 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
SCAMP4-211ENST00000588907 PIP4K2BP78356 416 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms