RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 PDE3AQ14432 1141 aa19.66■□□□□ 0.74
SAFB-205ENST00000588852 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
SAFB-205ENST00000588852 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
SAFB-205ENST00000588852 RUNDC1Q96C34 613 aa19.65■□□□□ 0.74
SAFB-205ENST00000588852 INO80Q9ULG1 1556 aaPredicted RBP19.65■□□□□ 0.74
SAFB-205ENST00000588852 MYOM2P54296 1465 aa19.63■□□□□ 0.73
SAFB-205ENST00000588852 CABP2Q9NPB3 220 aa19.62■□□□□ 0.73
SAFB-205ENST00000588852 SLKQ9H2G2 1235 aaPredicted RBP19.62■□□□□ 0.73
SAFB-205ENST00000588852 KIF1BO60333 1816 aa19.62■□□□□ 0.73
SAFB-205ENST00000588852 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
SAFB-205ENST00000588852 PPRC1Q5VV67 1664 aaKnown RBP19.61■□□□□ 0.73
SAFB-205ENST00000588852 U2AF1L5P0DN76 240 aaPredicted RBP19.61■□□□□ 0.73
SAFB-205ENST00000588852 U2AF1Q01081 240 aaKnown RBP eCLIP19.61■□□□□ 0.735e-6■□□□□ 10
SAFB-205ENST00000588852 TSR2Q969E8 191 aaKnown RBP19.61■□□□□ 0.73
SAFB-205ENST00000588852 C14orf93Q9H972 538 aaKnown RBP19.61■□□□□ 0.73
SAFB-205ENST00000588852 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
SAFB-205ENST00000588852 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
SAFB-205ENST00000588852 STK26Q9P289 416 aa19.59■□□□□ 0.73
SAFB-205ENST00000588852 ABCA9Q8IUA7 1624 aa19.59■□□□□ 0.73
SAFB-205ENST00000588852 SHPRHQ149N8 1683 aa19.58■□□□□ 0.73
SAFB-205ENST00000588852 PDZRN3Q9UPQ7 1066 aa19.58■□□□□ 0.72
SAFB-205ENST00000588852 NPATQ14207 1427 aa19.58■□□□□ 0.72
SAFB-205ENST00000588852 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
SAFB-205ENST00000588852 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
SAFB-205ENST00000588852 SPRYD3Q8NCJ5 442 aa19.57■□□□□ 0.72
SAFB-205ENST00000588852 ARAP3Q8WWN8 1544 aa19.57■□□□□ 0.72
SAFB-205ENST00000588852 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
SAFB-205ENST00000588852 KIDINS220Q9ULH0 1771 aa19.56■□□□□ 0.72
SAFB-205ENST00000588852 NRXN1Q9ULB1 1477 aa19.56■□□□□ 0.72
SAFB-205ENST00000588852 IFT172Q9UG01 1749 aa19.55■□□□□ 0.72
SAFB-205ENST00000588852 U2SURPO15042 1029 aaKnown RBP19.55■□□□□ 0.72
SAFB-205ENST00000588852 GGNBP2Q9H3C7 697 aa19.55■□□□□ 0.72
SAFB-205ENST00000588852 SBNO2Q9Y2G9 1366 aa19.54■□□□□ 0.72
SAFB-205ENST00000588852 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
SAFB-205ENST00000588852 MAPK8IP3Q9UPT6 1336 aa19.53■□□□□ 0.72
SAFB-205ENST00000588852 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
SAFB-205ENST00000588852 RAPGEF3O95398 923 aa19.52■□□□□ 0.72
SAFB-205ENST00000588852 WDR63Q8IWG1 891 aa19.52■□□□□ 0.72
SAFB-205ENST00000588852 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
SAFB-205ENST00000588852 CFAP53Q96M91 514 aa19.52■□□□□ 0.71
SAFB-205ENST00000588852 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.71
SAFB-205ENST00000588852 POGKQ9P215 609 aa19.52■□□□□ 0.71
SAFB-205ENST00000588852 QRICH2Q9H0J4 1663 aa19.51■□□□□ 0.71
SAFB-205ENST00000588852 ADGRB3O60242 1522 aa19.51■□□□□ 0.71
SAFB-205ENST00000588852 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
SAFB-205ENST00000588852 FBLN1P23142 703 aa19.51■□□□□ 0.71
SAFB-205ENST00000588852 EXOSC9Q06265 439 aaKnown RBP19.5■□□□□ 0.71
SAFB-205ENST00000588852 PMFBP1Q8TBY8 1022 aa19.5■□□□□ 0.71
SAFB-205ENST00000588852 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
SAFB-205ENST00000588852 MYO3AQ8NEV4 1616 aa19.49■□□□□ 0.71
SAFB-205ENST00000588852 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
SAFB-205ENST00000588852 FTSJ3Q8IY81 847 aaKnown RBP19.48■□□□□ 0.71
SAFB-205ENST00000588852 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
SAFB-205ENST00000588852 NEURL4Q96JN8 1562 aa19.48■□□□□ 0.71
SAFB-205ENST00000588852 MVPQ14764 893 aaKnown RBP19.47■□□□□ 0.71
SAFB-205ENST00000588852 ARXQ96QS3 562 aa19.47■□□□□ 0.71
SAFB-205ENST00000588852 SMC4Q9NTJ3 1288 aa19.47■□□□□ 0.71
SAFB-205ENST00000588852 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
SAFB-205ENST00000588852 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
SAFB-205ENST00000588852 NINLQ9Y2I6 1382 aa19.46■□□□□ 0.71
SAFB-205ENST00000588852 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
SAFB-205ENST00000588852 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
SAFB-205ENST00000588852 TRIM27P14373 513 aa19.45■□□□□ 0.7
SAFB-205ENST00000588852 IDI1Q13907 227 aa19.45■□□□□ 0.7
SAFB-205ENST00000588852 DZIP1LQ8IYY4 767 aaKnown RBP19.45■□□□□ 0.7
SAFB-205ENST00000588852 RWDD1Q9H446 243 aaPredicted RBP19.45■□□□□ 0.7
SAFB-205ENST00000588852 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
SAFB-205ENST00000588852 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
SAFB-205ENST00000588852 TULP4Q9NRJ4 1543 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 PPLO60437 1756 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 SETBP1Q9Y6X0 1596 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 TBC1D32Q96NH3 1257 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
SAFB-205ENST00000588852 TMPOP42166 694 aaKnown RBP19.43■□□□□ 0.7
SAFB-205ENST00000588852 CD109Q6YHK3 1445 aa19.43■□□□□ 0.7
SAFB-205ENST00000588852 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
SAFB-205ENST00000588852 FRMPD1Q5SYB0 1578 aa19.43■□□□□ 0.7
SAFB-205ENST00000588852 PLEKHF1Q96S99 279 aa19.43■□□□□ 0.7
SAFB-205ENST00000588852 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
SAFB-205ENST00000588852 VIRMAQ69YN4 1812 aaKnown RBP19.42■□□□□ 0.7
SAFB-205ENST00000588852 MFAP1P55081 439 aaKnown RBP19.42■□□□□ 0.7
SAFB-205ENST00000588852 BECN1Q14457 450 aa19.42■□□□□ 0.7
SAFB-205ENST00000588852 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
SAFB-205ENST00000588852 ANTXR1Q9H6X2 564 aa19.42■□□□□ 0.7
SAFB-205ENST00000588852 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
SAFB-205ENST00000588852 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
SAFB-205ENST00000588852 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
SAFB-205ENST00000588852 FYB1O15117 783 aa19.41■□□□□ 0.7
SAFB-205ENST00000588852 UPF2Q9HAU5 1272 aaKnown RBP19.4■□□□□ 0.7
SAFB-205ENST00000588852 GLI2P10070 1586 aa19.4■□□□□ 0.7
SAFB-205ENST00000588852 RIPK4P57078 832 aa19.39■□□□□ 0.7
SAFB-205ENST00000588852 TMEM57Q8N5G2 664 aa19.39■□□□□ 0.69
SAFB-205ENST00000588852 PRAM1Q96QH2 718 aa19.39■□□□□ 0.69
SAFB-205ENST00000588852 SIGLEC1Q9BZZ2 1709 aa19.38■□□□□ 0.69
SAFB-205ENST00000588852 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
SAFB-205ENST00000588852 POGZQ7Z3K3 1410 aa19.37■□□□□ 0.69
SAFB-205ENST00000588852 ABCC3O15438 1527 aa19.36■□□□□ 0.69
SAFB-205ENST00000588852 ATF7IPQ6VMQ6 1270 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms