RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
ERCC2-211ENST00000588652 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
ERCC2-211ENST00000588652 EXOC6Q8TAG9 804 aa23.18■■□□□ 1.3
ERCC2-211ENST00000588652 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
ERCC2-211ENST00000588652 STK26Q9P289 416 aa23.17■■□□□ 1.3
ERCC2-211ENST00000588652 ZNF521Q96K83 1311 aa23.16■■□□□ 1.3
ERCC2-211ENST00000588652 PTPRMP28827 1452 aa23.16■■□□□ 1.3
ERCC2-211ENST00000588652 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
ERCC2-211ENST00000588652 POLR3AO14802 1390 aaPredicted RBP23.15■■□□□ 1.3
ERCC2-211ENST00000588652 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
ERCC2-211ENST00000588652 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
ERCC2-211ENST00000588652 MORC1Q86VD1 984 aa23.14■■□□□ 1.3
ERCC2-211ENST00000588652 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.3
ERCC2-211ENST00000588652 ALKQ9UM73 1620 aa23.14■■□□□ 1.3
ERCC2-211ENST00000588652 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
ERCC2-211ENST00000588652 MLECQ14165 292 aa23.13■■□□□ 1.29
ERCC2-211ENST00000588652 CABP2Q9NPB3 220 aa23.13■■□□□ 1.29
ERCC2-211ENST00000588652 CGNL1Q0VF96 1302 aa23.13■■□□□ 1.29
ERCC2-211ENST00000588652 CCDC146Q8IYE0 955 aa23.12■■□□□ 1.29
ERCC2-211ENST00000588652 A2ML1A8K2U0 1454 aa23.12■■□□□ 1.29
ERCC2-211ENST00000588652 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
ERCC2-211ENST00000588652 RTN4Q9NQC3 1192 aaKnown RBP23.1■■□□□ 1.29
ERCC2-211ENST00000588652 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
ERCC2-211ENST00000588652 PRAM1Q96QH2 718 aa23.09■■□□□ 1.29
ERCC2-211ENST00000588652 SHPRHQ149N8 1683 aa23.08■■□□□ 1.29
ERCC2-211ENST00000588652 APAF1O14727 1248 aa23.08■■□□□ 1.29
ERCC2-211ENST00000588652 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
ERCC2-211ENST00000588652 NINLQ9Y2I6 1382 aa23.08■■□□□ 1.29
ERCC2-211ENST00000588652 NSD2O96028 1365 aa23.07■■□□□ 1.28
ERCC2-211ENST00000588652 SRPK2P78362 688 aaKnown RBP23.07■■□□□ 1.28
ERCC2-211ENST00000588652 POGKQ9P215 609 aa23.06■■□□□ 1.28
ERCC2-211ENST00000588652 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
ERCC2-211ENST00000588652 MINK1Q8N4C8 1332 aaPredicted RBP23.06■■□□□ 1.28
ERCC2-211ENST00000588652 A0A1W2PP64 1363 aa23.05■■□□□ 1.28
ERCC2-211ENST00000588652 ATAD2Q6PL18 1390 aa23.04■■□□□ 1.28
ERCC2-211ENST00000588652 SLFN5Q08AF3 891 aa23.04■■□□□ 1.28
ERCC2-211ENST00000588652 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
ERCC2-211ENST00000588652 PLIN1O60240 522 aa23.03■■□□□ 1.28
ERCC2-211ENST00000588652 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
ERCC2-211ENST00000588652 NGEFQ8N5V2 710 aa23.03■■□□□ 1.28
ERCC2-211ENST00000588652 ZMYM3Q14202 1370 aa23.03■■□□□ 1.28
ERCC2-211ENST00000588652 MTHFSP49914 203 aa23.02■■□□□ 1.28
ERCC2-211ENST00000588652 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
ERCC2-211ENST00000588652 ABCC11Q96J66 1382 aa23.02■■□□□ 1.28
ERCC2-211ENST00000588652 ESF1Q9H501 851 aaKnown RBP23.01■■□□□ 1.27
ERCC2-211ENST00000588652 ANP32AP39687 249 aaKnown RBP23■■□□□ 1.27
ERCC2-211ENST00000588652 DLC1Q96QB1 1528 aa22.99■■□□□ 1.27
ERCC2-211ENST00000588652 TCERG1O14776 1098 aaKnown RBP22.99■■□□□ 1.27
ERCC2-211ENST00000588652 CD163L1Q9NR16 1453 aa22.98■■□□□ 1.27
ERCC2-211ENST00000588652 SPINK5Q9NQ38 1064 aaPredicted RBP22.98■■□□□ 1.27
ERCC2-211ENST00000588652 PAK3O75914 559 aaPredicted RBP22.98■■□□□ 1.27
ERCC2-211ENST00000588652 CRBNQ96SW2 442 aa22.98■■□□□ 1.27
ERCC2-211ENST00000588652 CFAP53Q96M91 514 aa22.97■■□□□ 1.27
ERCC2-211ENST00000588652 TERF2IPQ9NYB0 399 aa22.97■■□□□ 1.27
ERCC2-211ENST00000588652 IPO9Q96P70 1041 aaKnown RBP22.97■■□□□ 1.27
ERCC2-211ENST00000588652 NRXN3Q9Y4C0 1643 aa22.97■■□□□ 1.27
ERCC2-211ENST00000588652 CDK19Q9BWU1 502 aa22.96■■□□□ 1.27
ERCC2-211ENST00000588652 E9PSI1 815 aa22.94■■□□□ 1.26
ERCC2-211ENST00000588652 NKTRP30414 1462 aaKnown RBP22.94■■□□□ 1.26
ERCC2-211ENST00000588652 ANKRD26Q9UPS8 1709 aa22.94■■□□□ 1.26
ERCC2-211ENST00000588652 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
ERCC2-211ENST00000588652 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.93■■□□□ 1.26
ERCC2-211ENST00000588652 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
ERCC2-211ENST00000588652 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 WAPLQ7Z5K2 1190 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 GGNBP2Q9H3C7 697 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 C20orf194Q5TEA3 1177 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 MED14O60244 1454 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
ERCC2-211ENST00000588652 MS4A1P11836 297 aa22.91■■□□□ 1.26
ERCC2-211ENST00000588652 FYB1O15117 783 aa22.91■■□□□ 1.26
ERCC2-211ENST00000588652 TNRQ92752 1358 aa22.9■■□□□ 1.26
ERCC2-211ENST00000588652 HDGFL2Q7Z4V5 671 aaPredicted RBP22.9■■□□□ 1.26
ERCC2-211ENST00000588652 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
ERCC2-211ENST00000588652 TCP11L2Q8N4U5 519 aa22.89■■□□□ 1.26
ERCC2-211ENST00000588652 METP08581 1390 aa22.89■■□□□ 1.25
ERCC2-211ENST00000588652 PDE4AP27815 886 aa22.89■■□□□ 1.25
ERCC2-211ENST00000588652 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.88■■□□□ 1.25
ERCC2-211ENST00000588652 UBR1Q8IWV7 1749 aa22.87■■□□□ 1.25
ERCC2-211ENST00000588652 BACH2Q9BYV9 841 aa22.87■■□□□ 1.25
ERCC2-211ENST00000588652 HDGFP51858 240 aaKnown RBP22.86■■□□□ 1.25
ERCC2-211ENST00000588652 NEUROD2Q15784 382 aa22.86■■□□□ 1.25
ERCC2-211ENST00000588652 KIF20BQ96Q89 1820 aa22.86■■□□□ 1.25
ERCC2-211ENST00000588652 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
ERCC2-211ENST00000588652 U2AF1L5P0DN76 240 aaPredicted RBP22.84■■□□□ 1.25
ERCC2-211ENST00000588652 U2AF1Q01081 240 aaKnown RBP eCLIP22.84■■□□□ 1.25
ERCC2-211ENST00000588652 ZBTB47Q9UFB7 747 aaPredicted RBP22.84■■□□□ 1.25
ERCC2-211ENST00000588652 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
ERCC2-211ENST00000588652 ATP7BP35670 1465 aa22.84■■□□□ 1.25
ERCC2-211ENST00000588652 COL3A1P02461 1466 aaPredicted RBP22.84■■□□□ 1.25
ERCC2-211ENST00000588652 TMEM2Q9UHN6 1383 aa22.83■■□□□ 1.25
ERCC2-211ENST00000588652 CCDC27Q2M243 656 aa22.82■■□□□ 1.24
ERCC2-211ENST00000588652 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
ERCC2-211ENST00000588652 TECPR2O15040 1411 aa22.82■■□□□ 1.24
ERCC2-211ENST00000588652 ADGRB2O60241 1585 aa22.81■■□□□ 1.24
ERCC2-211ENST00000588652 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
ERCC2-211ENST00000588652 TXNDC2Q86VQ3 553 aa22.81■■□□□ 1.24
ERCC2-211ENST00000588652 WASLO00401 505 aaPredicted RBP22.8■■□□□ 1.24
ERCC2-211ENST00000588652 BCAR3O75815 825 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms