RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 DDX17Q92841 729 aaKnown RBP28.46■■■□□ 2.15
TPM4-208ENST00000588410 LRRC59Q96AG4 307 aaKnown RBP28.46■■■□□ 2.15
TPM4-208ENST00000588410 PLEKHH1Q9ULM0 1364 aa28.46■■■□□ 2.15
TPM4-208ENST00000588410 MEX3CQ5U5Q3 659 aaKnown RBP28.43■■■□□ 2.14
TPM4-208ENST00000588410 ESCO1Q5FWF5 840 aa28.42■■■□□ 2.14
TPM4-208ENST00000588410 RGS17Q9UGC6 210 aaPredicted RBP28.42■■■□□ 2.14
TPM4-208ENST00000588410 LAMC1P11047 1609 aa28.42■■■□□ 2.14
TPM4-208ENST00000588410 PRAM1Q96QH2 718 aa28.4■■■□□ 2.14
TPM4-208ENST00000588410 POGKQ9P215 609 aa28.4■■■□□ 2.14
TPM4-208ENST00000588410 CDC42BPGQ6DT37 1551 aa28.4■■■□□ 2.14
TPM4-208ENST00000588410 NUTM2FA1L443 756 aa28.39■■■□□ 2.14
TPM4-208ENST00000588410 NUTM2BA6NNL0 878 aaPredicted RBP28.39■■■□□ 2.14
TPM4-208ENST00000588410 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.14
TPM4-208ENST00000588410 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.14
TPM4-208ENST00000588410 SAFB2Q14151 953 aaKnown RBP eCLIP28.38■■■□□ 2.13
TPM4-208ENST00000588410 KNDC1Q76NI1 1749 aa28.37■■■□□ 2.13
TPM4-208ENST00000588410 TRAK1Q9UPV9 953 aa28.36■■■□□ 2.13
TPM4-208ENST00000588410 NHSL1Q5SYE7 1610 aa28.35■■■□□ 2.13
TPM4-208ENST00000588410 SOS2Q07890 1332 aaPredicted RBP28.33■■■□□ 2.13
TPM4-208ENST00000588410 NPHP3Q7Z494 1330 aa28.33■■■□□ 2.13
TPM4-208ENST00000588410 LRP6O75581 1613 aa28.32■■■□□ 2.12
TPM4-208ENST00000588410 POTEAQ6S8J7 498 aa28.31■■■□□ 2.12
TPM4-208ENST00000588410 PNPLA6Q8IY17 1366 aa28.31■■■□□ 2.12
TPM4-208ENST00000588410 ADGRB1O14514 1584 aa28.31■■■□□ 2.12
TPM4-208ENST00000588410 SHPRHQ149N8 1683 aa28.31■■■□□ 2.12
TPM4-208ENST00000588410 DLC1Q96QB1 1528 aa28.3■■■□□ 2.12
TPM4-208ENST00000588410 FOXO3O43524 673 aa28.3■■■□□ 2.12
TPM4-208ENST00000588410 ZNF772Q68DY9 489 aaPredicted RBP28.26■■■□□ 2.11
TPM4-208ENST00000588410 XPCQ01831 940 aaPredicted RBP28.25■■■□□ 2.11
TPM4-208ENST00000588410 TRIM26Q12899 539 aaPredicted RBP28.24■■■□□ 2.11
TPM4-208ENST00000588410 MINK1Q8N4C8 1332 aaPredicted RBP28.23■■■□□ 2.11
TPM4-208ENST00000588410 HIRIP3Q9BW71 556 aaPredicted RBP28.23■■■□□ 2.11
TPM4-208ENST00000588410 NEUROD1Q13562 356 aa28.22■■■□□ 2.11
TPM4-208ENST00000588410 SIN3AQ96ST3 1273 aa28.22■■■□□ 2.11
TPM4-208ENST00000588410 PHF8Q9UPP1 1060 aa28.22■■■□□ 2.11
TPM4-208ENST00000588410 C8orf37Q96NL8 207 aa28.2■■■□□ 2.1
TPM4-208ENST00000588410 FMN2Q9NZ56 1722 aa28.19■■■□□ 2.1
TPM4-208ENST00000588410 ADAMTS2O95450 1211 aa28.19■■■□□ 2.1
TPM4-208ENST00000588410 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
TPM4-208ENST00000588410 AFF2P51816 1311 aa28.18■■■□□ 2.1
TPM4-208ENST00000588410 PXDNQ92626 1479 aa28.17■■■□□ 2.1
TPM4-208ENST00000588410 EIF3AQ14152 1382 aaKnown RBP28.17■■■□□ 2.1
TPM4-208ENST00000588410 KRT28Q7Z3Y7 464 aa28.17■■■□□ 2.1
TPM4-208ENST00000588410 PSME1Q06323 249 aa28.16■■■□□ 2.1
TPM4-208ENST00000588410 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
TPM4-208ENST00000588410 WASLO00401 505 aaPredicted RBP28.15■■■□□ 2.1
TPM4-208ENST00000588410 NBPF1Q3BBV0 1214 aa28.15■■■□□ 2.1
TPM4-208ENST00000588410 NGLY1Q96IV0 654 aa28.14■■■□□ 2.1
TPM4-208ENST00000588410 ADGRB2O60241 1585 aa28.12■■■□□ 2.09
TPM4-208ENST00000588410 PMFBP1Q8TBY8 1022 aa28.12■■■□□ 2.09
TPM4-208ENST00000588410 KIF1AQ12756 1690 aa28.11■■■□□ 2.09
TPM4-208ENST00000588410 SPATA31A3Q5VYP0 1347 aa28.11■■■□□ 2.09
TPM4-208ENST00000588410 RXRBP28702 533 aa28.09■■■□□ 2.09
TPM4-208ENST00000588410 LMOD2Q6P5Q4 547 aa28.06■■■□□ 2.08
TPM4-208ENST00000588410 PRR36Q9H6K5 1346 aa28.06■■■□□ 2.08
TPM4-208ENST00000588410 KIAA1210Q9ULL0 1709 aa28.06■■■□□ 2.08
TPM4-208ENST00000588410 QTRT2Q9H974 415 aaKnown RBP28.05■■■□□ 2.08
TPM4-208ENST00000588410 TULP4Q9NRJ4 1543 aa28.05■■■□□ 2.08
TPM4-208ENST00000588410 SBNO1A3KN83 1393 aa28.04■■■□□ 2.08
TPM4-208ENST00000588410 GPRASP1Q5JY77 1395 aa28.04■■■□□ 2.08
TPM4-208ENST00000588410 NGDNQ8NEJ9 315 aaKnown RBP28.04■■■□□ 2.08
TPM4-208ENST00000588410 CDK19Q9BWU1 502 aa28.04■■■□□ 2.08
TPM4-208ENST00000588410 TNS3Q68CZ2 1445 aa28.03■■■□□ 2.08
TPM4-208ENST00000588410 HAP1P54257 671 aaPredicted RBP28.03■■■□□ 2.08
TPM4-208ENST00000588410 NUDT16Q96DE0 195 aaKnown RBP28.03■■■□□ 2.08
TPM4-208ENST00000588410 USP21Q9UK80 565 aa28.03■■■□□ 2.08
TPM4-208ENST00000588410 COL22A1Q8NFW1 1626 aaPredicted RBP28.03■■■□□ 2.08
TPM4-208ENST00000588410 CENPJQ9HC77 1338 aaPredicted RBP28.02■■■□□ 2.08
TPM4-208ENST00000588410 ARHGEF28Q8N1W1 1705 aaKnown RBP28.01■■■□□ 2.07
TPM4-208ENST00000588410 PLEKHG5O94827 1062 aa28■■■□□ 2.07
TPM4-208ENST00000588410 USP32Q8NFA0 1604 aa28■■■□□ 2.07
TPM4-208ENST00000588410 ARHGEF10O15013 1369 aa27.99■■■□□ 2.07
TPM4-208ENST00000588410 FNBP4Q8N3X1 1017 aaPredicted RBP27.99■■■□□ 2.07
TPM4-208ENST00000588410 RBM6P78332 1123 aaKnown RBP27.98■■■□□ 2.07
TPM4-208ENST00000588410 ROCK2O75116 1388 aaKnown RBP27.98■■■□□ 2.07
TPM4-208ENST00000588410 TONSLQ96HA7 1378 aa27.97■■■□□ 2.07
TPM4-208ENST00000588410 TRPC5Q9UL62 973 aaPredicted RBP27.96■■■□□ 2.07
TPM4-208ENST00000588410 SRPK2P78362 688 aaKnown RBP27.95■■■□□ 2.06
TPM4-208ENST00000588410 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
TPM4-208ENST00000588410 RGPD8O14715 1765 aaPredicted RBP27.95■■■□□ 2.06
TPM4-208ENST00000588410 PAK3O75914 559 aaPredicted RBP27.94■■■□□ 2.06
TPM4-208ENST00000588410 CCDC61Q9Y6R9 512 aa27.94■■■□□ 2.06
TPM4-208ENST00000588410 ATP7BP35670 1465 aa27.94■■■□□ 2.06
TPM4-208ENST00000588410 CDK12Q9NYV4 1490 aaPredicted RBP27.91■■■□□ 2.06
TPM4-208ENST00000588410 NBPF8Q3BBV2 869 aa27.9■■■□□ 2.06
TPM4-208ENST00000588410 CABP2Q9NPB3 220 aa27.89■■■□□ 2.06
TPM4-208ENST00000588410 PLEKHG3A1L390 1219 aa27.87■■■□□ 2.05
TPM4-208ENST00000588410 ACEP12821 1306 aa27.87■■■□□ 2.05
TPM4-208ENST00000588410 TRPM1Q7Z4N2 1603 aa27.85■■■□□ 2.05
TPM4-208ENST00000588410 ATRNO75882 1429 aa27.85■■■□□ 2.05
TPM4-208ENST00000588410 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
TPM4-208ENST00000588410 UNC5CLQ8IV45 518 aa27.85■■■□□ 2.05
TPM4-208ENST00000588410 EVC2Q86UK5 1308 aa27.85■■■□□ 2.05
TPM4-208ENST00000588410 CARD11Q9BXL7 1154 aa27.84■■■□□ 2.05
TPM4-208ENST00000588410 POLR3AO14802 1390 aaPredicted RBP27.83■■■□□ 2.05
TPM4-208ENST00000588410 RGS12O14924 1447 aa27.83■■■□□ 2.05
TPM4-208ENST00000588410 PPIP5K1Q6PFW1 1433 aa27.81■■■□□ 2.04
TPM4-208ENST00000588410 GJD4Q96KN9 370 aaPredicted RBP27.8■■■□□ 2.04
TPM4-208ENST00000588410 SLIT2O94813 1529 aa27.8■■■□□ 2.04
TPM4-208ENST00000588410 ITSN1Q15811 1721 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms