RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 BRINP3Q76B58 766 aa14.53□□□□□ -0.08
TPM4-207ENST00000588032 POGKQ9P215 609 aa14.53□□□□□ -0.08
TPM4-207ENST00000588032 NALCNQ8IZF0 1738 aa14.52□□□□□ -0.08
TPM4-207ENST00000588032 PRAM1Q96QH2 718 aa14.52□□□□□ -0.09
TPM4-207ENST00000588032 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.09
TPM4-207ENST00000588032 PLEKHH1Q9ULM0 1364 aa14.51□□□□□ -0.09
TPM4-207ENST00000588032 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
TPM4-207ENST00000588032 KIAA1210Q9ULL0 1709 aa14.5□□□□□ -0.09
TPM4-207ENST00000588032 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
TPM4-207ENST00000588032 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
TPM4-207ENST00000588032 CDC42BPGQ6DT37 1551 aa14.49□□□□□ -0.09
TPM4-207ENST00000588032 NBPF1Q3BBV0 1214 aa14.48□□□□□ -0.09
TPM4-207ENST00000588032 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
TPM4-207ENST00000588032 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
TPM4-207ENST00000588032 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.09
TPM4-207ENST00000588032 ORAI2Q96SN7 254 aa14.46□□□□□ -0.09
TPM4-207ENST00000588032 JCADQ9P266 1359 aa14.46□□□□□ -0.1
TPM4-207ENST00000588032 PHLPP1O60346 1717 aa14.45□□□□□ -0.1
TPM4-207ENST00000588032 LRRC59Q96AG4 307 aaKnown RBP14.45□□□□□ -0.1
TPM4-207ENST00000588032 TIMELESSQ9UNS1 1208 aa14.45□□□□□ -0.1
TPM4-207ENST00000588032 EIF3AQ14152 1382 aaKnown RBP14.44□□□□□ -0.1
TPM4-207ENST00000588032 MINK1Q8N4C8 1332 aaPredicted RBP14.43□□□□□ -0.1
TPM4-207ENST00000588032 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
TPM4-207ENST00000588032 NPHP3Q7Z494 1330 aa14.42□□□□□ -0.1
TPM4-207ENST00000588032 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
TPM4-207ENST00000588032 WASLO00401 505 aaPredicted RBP14.42□□□□□ -0.1
TPM4-207ENST00000588032 NBPF8Q3BBV2 869 aa14.42□□□□□ -0.1
TPM4-207ENST00000588032 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
TPM4-207ENST00000588032 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
TPM4-207ENST00000588032 SPATA31A6Q5VVP1 1343 aa14.41□□□□□ -0.1
TPM4-207ENST00000588032 ANKARQ7Z5J8 1434 aa14.41□□□□□ -0.1
TPM4-207ENST00000588032 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
TPM4-207ENST00000588032 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
TPM4-207ENST00000588032 ADGRB2O60241 1585 aa14.41□□□□□ -0.1
TPM4-207ENST00000588032 FMN2Q9NZ56 1722 aa14.41□□□□□ -0.1
TPM4-207ENST00000588032 FOXO3O43524 673 aa14.4□□□□□ -0.1
TPM4-207ENST00000588032 DDX17Q92841 729 aaKnown RBP14.4□□□□□ -0.1
TPM4-207ENST00000588032 NHSL1Q5SYE7 1610 aa14.4□□□□□ -0.1
TPM4-207ENST00000588032 CENPJQ9HC77 1338 aaPredicted RBP14.4□□□□□ -0.1
TPM4-207ENST00000588032 GPRASP1Q5JY77 1395 aa14.39□□□□□ -0.11
TPM4-207ENST00000588032 ARHGEF28Q8N1W1 1705 aaKnown RBP14.39□□□□□ -0.11
TPM4-207ENST00000588032 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
TPM4-207ENST00000588032 TRPM1Q7Z4N2 1603 aa14.39□□□□□ -0.11
TPM4-207ENST00000588032 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
TPM4-207ENST00000588032 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
TPM4-207ENST00000588032 PSME1Q06323 249 aa14.37□□□□□ -0.11
TPM4-207ENST00000588032 CDK19Q9BWU1 502 aa14.37□□□□□ -0.11
TPM4-207ENST00000588032 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
TPM4-207ENST00000588032 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
TPM4-207ENST00000588032 TULP4Q9NRJ4 1543 aa14.36□□□□□ -0.11
TPM4-207ENST00000588032 KRT28Q7Z3Y7 464 aa14.35□□□□□ -0.11
TPM4-207ENST00000588032 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
TPM4-207ENST00000588032 RALGAPBQ86X10 1494 aa14.35□□□□□ -0.11
TPM4-207ENST00000588032 PNPLA6Q8IY17 1366 aa14.34□□□□□ -0.11
TPM4-207ENST00000588032 SHPRHQ149N8 1683 aa14.34□□□□□ -0.11
TPM4-207ENST00000588032 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
TPM4-207ENST00000588032 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
TPM4-207ENST00000588032 PXDNQ92626 1479 aa14.33□□□□□ -0.12
TPM4-207ENST00000588032 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.12
TPM4-207ENST00000588032 EVC2Q86UK5 1308 aa14.33□□□□□ -0.12
TPM4-207ENST00000588032 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
TPM4-207ENST00000588032 SRPK2P78362 688 aaKnown RBP14.32□□□□□ -0.12
TPM4-207ENST00000588032 XPCQ01831 940 aaPredicted RBP14.32□□□□□ -0.12
TPM4-207ENST00000588032 MEX3CQ5U5Q3 659 aaKnown RBP14.32□□□□□ -0.12
TPM4-207ENST00000588032 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
TPM4-207ENST00000588032 USP32Q8NFA0 1604 aa14.31□□□□□ -0.12
TPM4-207ENST00000588032 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
TPM4-207ENST00000588032 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
TPM4-207ENST00000588032 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
TPM4-207ENST00000588032 SPATA31A3Q5VYP0 1347 aa14.31□□□□□ -0.12
TPM4-207ENST00000588032 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
TPM4-207ENST00000588032 PLEKHG3A1L390 1219 aa14.3□□□□□ -0.12
TPM4-207ENST00000588032 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
TPM4-207ENST00000588032 ATP7BP35670 1465 aa14.3□□□□□ -0.12
TPM4-207ENST00000588032 RGPD8O14715 1765 aaPredicted RBP14.29□□□□□ -0.12
TPM4-207ENST00000588032 QRICH2Q9H0J4 1663 aa14.28□□□□□ -0.12
TPM4-207ENST00000588032 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
TPM4-207ENST00000588032 LRP6O75581 1613 aa14.27□□□□□ -0.12
TPM4-207ENST00000588032 ARHGEF10O15013 1369 aa14.27□□□□□ -0.12
TPM4-207ENST00000588032 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.13
TPM4-207ENST00000588032 RGS17Q9UGC6 210 aaPredicted RBP14.27□□□□□ -0.13
TPM4-207ENST00000588032 TNS3Q68CZ2 1445 aa14.26□□□□□ -0.13
TPM4-207ENST00000588032 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
TPM4-207ENST00000588032 ITSN1Q15811 1721 aa14.26□□□□□ -0.13
TPM4-207ENST00000588032 COL22A1Q8NFW1 1626 aaPredicted RBP14.26□□□□□ -0.13
TPM4-207ENST00000588032 ACEP12821 1306 aa14.25□□□□□ -0.13
TPM4-207ENST00000588032 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
TPM4-207ENST00000588032 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
TPM4-207ENST00000588032 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
TPM4-207ENST00000588032 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
TPM4-207ENST00000588032 ADAMTS2O95450 1211 aa14.24□□□□□ -0.13
TPM4-207ENST00000588032 ILDR2Q71H61 639 aa14.24□□□□□ -0.13
TPM4-207ENST00000588032 CABP1Q9NZU7 370 aa14.24□□□□□ -0.13
TPM4-207ENST00000588032 BRD4O60885 1362 aaPredicted RBP14.23□□□□□ -0.13
TPM4-207ENST00000588032 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
TPM4-207ENST00000588032 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
TPM4-207ENST00000588032 NGLY1Q96IV0 654 aa14.23□□□□□ -0.13
TPM4-207ENST00000588032 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
TPM4-207ENST00000588032 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
TPM4-207ENST00000588032 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms