RNA–Protein interactions for RNA: ENST00000587072.1

GCDH-205, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 453 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-205ENST00000587072 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
GCDH-205ENST00000587072 ATF3P18847 181 aa23.32■■□□□ 1.32
GCDH-205ENST00000587072 CADPS2Q86UW7 1296 aa23.32■■□□□ 1.32
GCDH-205ENST00000587072 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
GCDH-205ENST00000587072 POGKQ9P215 609 aa23.32■■□□□ 1.32
GCDH-205ENST00000587072 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
GCDH-205ENST00000587072 CDC42BPGQ6DT37 1551 aa23.29■■□□□ 1.32
GCDH-205ENST00000587072 CARD11Q9BXL7 1154 aa23.27■■□□□ 1.32
GCDH-205ENST00000587072 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
GCDH-205ENST00000587072 SAFB2Q14151 953 aaKnown RBP eCLIP23.25■■□□□ 1.31
GCDH-205ENST00000587072 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
GCDH-205ENST00000587072 PIP4K2BP78356 416 aa23.24■■□□□ 1.31
GCDH-205ENST00000587072 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
GCDH-205ENST00000587072 SLAIN2Q9P270 581 aa23.23■■□□□ 1.31
GCDH-205ENST00000587072 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
GCDH-205ENST00000587072 MST1RQ04912 1400 aa23.21■■□□□ 1.31
GCDH-205ENST00000587072 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
GCDH-205ENST00000587072 MINK1Q8N4C8 1332 aaPredicted RBP23.19■■□□□ 1.3
GCDH-205ENST00000587072 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
GCDH-205ENST00000587072 ROBO1Q9Y6N7 1651 aa23.18■■□□□ 1.3
GCDH-205ENST00000587072 C1orf167Q5SNV9 1468 aa23.17■■□□□ 1.3
GCDH-205ENST00000587072 HIRIP3Q9BW71 556 aaPredicted RBP23.16■■□□□ 1.3
GCDH-205ENST00000587072 WASLO00401 505 aaPredicted RBP23.13■■□□□ 1.29
GCDH-205ENST00000587072 ANKARQ7Z5J8 1434 aa23.12■■□□□ 1.29
GCDH-205ENST00000587072 USP47Q96K76 1375 aa23.12■■□□□ 1.29
GCDH-205ENST00000587072 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
GCDH-205ENST00000587072 TULP4Q9NRJ4 1543 aa23.11■■□□□ 1.29
GCDH-205ENST00000587072 BRINP3Q76B58 766 aa23.1■■□□□ 1.29
GCDH-205ENST00000587072 NUTM2FA1L443 756 aa23.09■■□□□ 1.29
GCDH-205ENST00000587072 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
GCDH-205ENST00000587072 ESCO1Q5FWF5 840 aa23.06■■□□□ 1.28
GCDH-205ENST00000587072 CDK19Q9BWU1 502 aa23.06■■□□□ 1.28
GCDH-205ENST00000587072 AHDC1Q5TGY3 1603 aaPredicted RBP23.06■■□□□ 1.28
GCDH-205ENST00000587072 USP32Q8NFA0 1604 aa23.06■■□□□ 1.28
GCDH-205ENST00000587072 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
GCDH-205ENST00000587072 RGPD8O14715 1765 aaPredicted RBP23.05■■□□□ 1.28
GCDH-205ENST00000587072 SLC24A1O60721 1099 aa23.05■■□□□ 1.28
GCDH-205ENST00000587072 ORAI2Q96SN7 254 aa23.05■■□□□ 1.28
GCDH-205ENST00000587072 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
GCDH-205ENST00000587072 NHSL1Q5SYE7 1610 aa23.04■■□□□ 1.28
GCDH-205ENST00000587072 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
GCDH-205ENST00000587072 HSPA1LP34931 641 aa23.04■■□□□ 1.28
GCDH-205ENST00000587072 ATP7BP35670 1465 aa23.04■■□□□ 1.28
GCDH-205ENST00000587072 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
GCDH-205ENST00000587072 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
GCDH-205ENST00000587072 NUDT16Q96DE0 195 aaKnown RBP23.01■■□□□ 1.27
GCDH-205ENST00000587072 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
GCDH-205ENST00000587072 PHF8Q9UPP1 1060 aa23■■□□□ 1.27
GCDH-205ENST00000587072 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
GCDH-205ENST00000587072 EIF4G2P78344 907 aaKnown RBP eCLIP22.99■■□□□ 1.27
GCDH-205ENST00000587072 TESK2Q96S53 571 aa22.99■■□□□ 1.27
GCDH-205ENST00000587072 NPHP3Q7Z494 1330 aa22.99■■□□□ 1.27
GCDH-205ENST00000587072 COL16A1Q07092 1604 aaPredicted RBP22.98■■□□□ 1.27
GCDH-205ENST00000587072 CABP2Q9NPB3 220 aa22.98■■□□□ 1.27
GCDH-205ENST00000587072 CCDC61Q9Y6R9 512 aa22.97■■□□□ 1.27
GCDH-205ENST00000587072 ATAD2Q6PL18 1390 aa22.96■■□□□ 1.27
GCDH-205ENST00000587072 FOXO3O43524 673 aa22.95■■□□□ 1.26
GCDH-205ENST00000587072 TMF1P82094 1093 aa22.94■■□□□ 1.26
GCDH-205ENST00000587072 PPIP5K1Q6PFW1 1433 aa22.93■■□□□ 1.26
GCDH-205ENST00000587072 SOS2Q07890 1332 aaPredicted RBP22.93■■□□□ 1.26
GCDH-205ENST00000587072 PMFBP1Q8TBY8 1022 aa22.93■■□□□ 1.26
GCDH-205ENST00000587072 DDX17Q92841 729 aaKnown RBP22.93■■□□□ 1.26
GCDH-205ENST00000587072 PUS7Q96PZ0 661 aaKnown RBP22.93■■□□□ 1.26
GCDH-205ENST00000587072 PXDNQ92626 1479 aa22.92■■□□□ 1.26
GCDH-205ENST00000587072 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
GCDH-205ENST00000587072 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
GCDH-205ENST00000587072 NGDNQ8NEJ9 315 aaKnown RBP22.91■■□□□ 1.26
GCDH-205ENST00000587072 PLEKHG3A1L390 1219 aa22.9■■□□□ 1.26
GCDH-205ENST00000587072 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
GCDH-205ENST00000587072 LRRC59Q96AG4 307 aaKnown RBP22.9■■□□□ 1.26
GCDH-205ENST00000587072 JCADQ9P266 1359 aa22.89■■□□□ 1.26
GCDH-205ENST00000587072 PSME1Q06323 249 aa22.89■■□□□ 1.25
GCDH-205ENST00000587072 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
GCDH-205ENST00000587072 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
GCDH-205ENST00000587072 XPCQ01831 940 aaPredicted RBP22.87■■□□□ 1.25
GCDH-205ENST00000587072 KRT28Q7Z3Y7 464 aa22.87■■□□□ 1.25
GCDH-205ENST00000587072 SHPRHQ149N8 1683 aa22.87■■□□□ 1.25
GCDH-205ENST00000587072 ACEP12821 1306 aa22.86■■□□□ 1.25
GCDH-205ENST00000587072 CABP1Q9NZU7 370 aa22.86■■□□□ 1.25
GCDH-205ENST00000587072 NINLQ9Y2I6 1382 aa22.86■■□□□ 1.25
GCDH-205ENST00000587072 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
GCDH-205ENST00000587072 TNS3Q68CZ2 1445 aa22.82■■□□□ 1.24
GCDH-205ENST00000587072 TMC1Q8TDI8 760 aa22.82■■□□□ 1.24
GCDH-205ENST00000587072 TRPM3Q9HCF6 1732 aaPredicted RBP22.82■■□□□ 1.24
GCDH-205ENST00000587072 BRD4O60885 1362 aaPredicted RBP22.81■■□□□ 1.24
GCDH-205ENST00000587072 PNPLA6Q8IY17 1366 aa22.81■■□□□ 1.24
GCDH-205ENST00000587072 SPATA31A3Q5VYP0 1347 aa22.81■■□□□ 1.24
GCDH-205ENST00000587072 AKAP12Q02952 1782 aa22.8■■□□□ 1.24
GCDH-205ENST00000587072 SPATA31A6Q5VVP1 1343 aa22.8■■□□□ 1.24
GCDH-205ENST00000587072 ARHGEF10O15013 1369 aa22.79■■□□□ 1.24
GCDH-205ENST00000587072 ZNF692Q9BU19 519 aaPredicted RBP22.79■■□□□ 1.24
GCDH-205ENST00000587072 USP6P35125 1406 aa22.79■■□□□ 1.24
GCDH-205ENST00000587072 COL22A1Q8NFW1 1626 aaPredicted RBP22.78■■□□□ 1.24
GCDH-205ENST00000587072 CPSF1Q10570 1443 aaKnown RBP22.77■■□□□ 1.24
GCDH-205ENST00000587072 HDGFL2Q7Z4V5 671 aaPredicted RBP22.77■■□□□ 1.24
GCDH-205ENST00000587072 TERF2IPQ9NYB0 399 aa22.77■■□□□ 1.24
GCDH-205ENST00000587072 ALS2Q96Q42 1657 aa22.77■■□□□ 1.24
GCDH-205ENST00000587072 PAK3O75914 559 aaPredicted RBP22.76■■□□□ 1.23
GCDH-205ENST00000587072 SLC12A5Q9H2X9 1139 aa22.76■■□□□ 1.23
GCDH-205ENST00000587072 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms