RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 TECPR2O15040 1411 aa30.04■■■□□ 2.4
CIRBP-209ENST00000586555 TRIM26Q12899 539 aaPredicted RBP30.03■■■□□ 2.4
CIRBP-209ENST00000586555 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
CIRBP-209ENST00000586555 SOS2Q07890 1332 aaPredicted RBP30.02■■■□□ 2.4
CIRBP-209ENST00000586555 ABCC11Q96J66 1382 aa30.02■■■□□ 2.4
CIRBP-209ENST00000586555 DCAF11Q8TEB1 546 aa30■■■□□ 2.39
CIRBP-209ENST00000586555 C14orf93Q9H972 538 aaKnown RBP30■■■□□ 2.39
CIRBP-209ENST00000586555 NRXN1Q9ULB1 1477 aa29.99■■■□□ 2.39
CIRBP-209ENST00000586555 CDC42BPGQ6DT37 1551 aa29.98■■■□□ 2.39
CIRBP-209ENST00000586555 TMEM132EQ6IEE7 984 aa29.98■■■□□ 2.39
CIRBP-209ENST00000586555 WAPLQ7Z5K2 1190 aa29.97■■■□□ 2.39
CIRBP-209ENST00000586555 STK26Q9P289 416 aa29.97■■■□□ 2.39
CIRBP-209ENST00000586555 KDM2AQ9Y2K7 1162 aa29.97■■■□□ 2.39
CIRBP-209ENST00000586555 KNDC1Q76NI1 1749 aa29.96■■■□□ 2.39
CIRBP-209ENST00000586555 AFF2P51816 1311 aa29.96■■■□□ 2.39
CIRBP-209ENST00000586555 CFAP70Q5T0N1 1121 aa29.94■■■□□ 2.38
CIRBP-209ENST00000586555 DHX57Q6P158 1386 aaKnown RBP29.93■■■□□ 2.38
CIRBP-209ENST00000586555 RXRBP28702 533 aa29.92■■■□□ 2.38
CIRBP-209ENST00000586555 SIRT1Q96EB6 747 aa29.92■■■□□ 2.38
CIRBP-209ENST00000586555 YTHDC2Q9H6S0 1430 aaKnown RBP29.92■■■□□ 2.38
CIRBP-209ENST00000586555 PLEKHH1Q9ULM0 1364 aa29.91■■■□□ 2.38
CIRBP-209ENST00000586555 ESCO1Q5FWF5 840 aa29.9■■■□□ 2.38
CIRBP-209ENST00000586555 CDK12Q9NYV4 1490 aaPredicted RBP29.88■■■□□ 2.37
CIRBP-209ENST00000586555 C8orf37Q96NL8 207 aa29.88■■■□□ 2.37
CIRBP-209ENST00000586555 NPHP3Q7Z494 1330 aa29.87■■■□□ 2.37
CIRBP-209ENST00000586555 PXDNQ92626 1479 aa29.85■■■□□ 2.37
CIRBP-209ENST00000586555 COL22A1Q8NFW1 1626 aaPredicted RBP29.85■■■□□ 2.37
CIRBP-209ENST00000586555 FOXO3O43524 673 aa29.83■■■□□ 2.37
CIRBP-209ENST00000586555 ADAMTS2O95450 1211 aa29.83■■■□□ 2.37
CIRBP-209ENST00000586555 QTRT2Q9H974 415 aaKnown RBP29.83■■■□□ 2.37
CIRBP-209ENST00000586555 FMN2Q9NZ56 1722 aa29.82■■■□□ 2.36
CIRBP-209ENST00000586555 NUTM2FA1L443 756 aa29.81■■■□□ 2.36
CIRBP-209ENST00000586555 NGLY1Q96IV0 654 aa29.81■■■□□ 2.36
CIRBP-209ENST00000586555 RBM6P78332 1123 aaKnown RBP29.8■■■□□ 2.36
CIRBP-209ENST00000586555 UPF1Q92900 1129 aaKnown RBP eCLIP29.8■■■□□ 2.36
CIRBP-209ENST00000586555 FNBP4Q8N3X1 1017 aaPredicted RBP29.77■■■□□ 2.36
CIRBP-209ENST00000586555 POGKQ9P215 609 aa29.77■■■□□ 2.36
CIRBP-209ENST00000586555 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
CIRBP-209ENST00000586555 PRAM1Q96QH2 718 aa29.74■■■□□ 2.35
CIRBP-209ENST00000586555 ADGRB1O14514 1584 aa29.73■■■□□ 2.35
CIRBP-209ENST00000586555 KIF1AQ12756 1690 aa29.73■■■□□ 2.35
CIRBP-209ENST00000586555 RGPD8O14715 1765 aaPredicted RBP29.73■■■□□ 2.35
CIRBP-209ENST00000586555 DLC1Q96QB1 1528 aa29.73■■■□□ 2.35
CIRBP-209ENST00000586555 NEUROD1Q13562 356 aa29.73■■■□□ 2.35
CIRBP-209ENST00000586555 USP21Q9UK80 565 aa29.73■■■□□ 2.35
CIRBP-209ENST00000586555 SIN3AQ96ST3 1273 aa29.72■■■□□ 2.35
CIRBP-209ENST00000586555 TRAK1Q9UPV9 953 aa29.72■■■□□ 2.35
CIRBP-209ENST00000586555 RGS12O14924 1447 aa29.71■■■□□ 2.35
CIRBP-209ENST00000586555 SPATA31A3Q5VYP0 1347 aa29.7■■■□□ 2.34
CIRBP-209ENST00000586555 MARF1Q9Y4F3 1742 aaKnown RBP29.69■■■□□ 2.34
CIRBP-209ENST00000586555 TRPC5Q9UL62 973 aaPredicted RBP29.69■■■□□ 2.34
CIRBP-209ENST00000586555 SAFB2Q14151 953 aaKnown RBP eCLIP29.68■■■□□ 2.34
CIRBP-209ENST00000586555 L3MBTL2Q969R5 705 aa29.68■■■□□ 2.34
CIRBP-209ENST00000586555 KRT28Q7Z3Y7 464 aa29.67■■■□□ 2.34
CIRBP-209ENST00000586555 PHF8Q9UPP1 1060 aa29.67■■■□□ 2.34
CIRBP-209ENST00000586555 KIAA1210Q9ULL0 1709 aa29.66■■■□□ 2.34
CIRBP-209ENST00000586555 ATRNO75882 1429 aa29.65■■■□□ 2.34
CIRBP-209ENST00000586555 BCL9LQ86UU0 1499 aa29.64■■■□□ 2.34
CIRBP-209ENST00000586555 ADGRB2O60241 1585 aa29.62■■■□□ 2.33
CIRBP-209ENST00000586555 ANKARQ7Z5J8 1434 aa29.61■■■□□ 2.33
CIRBP-209ENST00000586555 USP32Q8NFA0 1604 aa29.6■■■□□ 2.33
CIRBP-209ENST00000586555 PSME1Q06323 249 aa29.59■■■□□ 2.33
CIRBP-209ENST00000586555 SBNO1A3KN83 1393 aa29.57■■■□□ 2.32
CIRBP-209ENST00000586555 TNS3Q68CZ2 1445 aa29.56■■■□□ 2.32
CIRBP-209ENST00000586555 MINK1Q8N4C8 1332 aaPredicted RBP29.56■■■□□ 2.32
CIRBP-209ENST00000586555 EIF3AQ14152 1382 aaKnown RBP29.55■■■□□ 2.32
CIRBP-209ENST00000586555 NBPF1Q3BBV0 1214 aa29.55■■■□□ 2.32
CIRBP-209ENST00000586555 SLIT2O94813 1529 aa29.55■■■□□ 2.32
CIRBP-209ENST00000586555 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.54■■■□□ 2.32
CIRBP-209ENST00000586555 HIRIP3Q9BW71 556 aaPredicted RBP29.54■■■□□ 2.32
CIRBP-209ENST00000586555 PMFBP1Q8TBY8 1022 aa29.53■■■□□ 2.32
CIRBP-209ENST00000586555 ARHGEF28Q8N1W1 1705 aaKnown RBP29.53■■■□□ 2.32
CIRBP-209ENST00000586555 TONSLQ96HA7 1378 aa29.52■■■□□ 2.32
CIRBP-209ENST00000586555 GJD4Q96KN9 370 aaPredicted RBP29.52■■■□□ 2.32
CIRBP-209ENST00000586555 PRR36Q9H6K5 1346 aa29.5■■■□□ 2.31
CIRBP-209ENST00000586555 WASLO00401 505 aaPredicted RBP29.5■■■□□ 2.31
CIRBP-209ENST00000586555 UNC5CLQ8IV45 518 aa29.5■■■□□ 2.31
CIRBP-209ENST00000586555 CABLES1Q8TDN4 633 aa29.49■■■□□ 2.31
CIRBP-209ENST00000586555 ARHGEF10O15013 1369 aa29.49■■■□□ 2.31
CIRBP-209ENST00000586555 ATAD2Q6PL18 1390 aa29.49■■■□□ 2.31
CIRBP-209ENST00000586555 TULP4Q9NRJ4 1543 aa29.48■■■□□ 2.31
CIRBP-209ENST00000586555 TRPM3Q9HCF6 1732 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-209ENST00000586555 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
CIRBP-209ENST00000586555 ABCA3Q99758 1704 aa29.45■■■□□ 2.3
CIRBP-209ENST00000586555 ROCK2O75116 1388 aaKnown RBP29.44■■■□□ 2.3
CIRBP-209ENST00000586555 TRPM1Q7Z4N2 1603 aa29.44■■■□□ 2.3
CIRBP-209ENST00000586555 GLI3P10071 1580 aa29.43■■■□□ 2.3
CIRBP-209ENST00000586555 CENPJQ9HC77 1338 aaPredicted RBP29.43■■■□□ 2.3
CIRBP-209ENST00000586555 LMOD2Q6P5Q4 547 aa29.42■■■□□ 2.3
CIRBP-209ENST00000586555 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
CIRBP-209ENST00000586555 ALS2Q96Q42 1657 aa29.41■■■□□ 2.3
CIRBP-209ENST00000586555 HAP1P54257 671 aaPredicted RBP29.41■■■□□ 2.3
CIRBP-209ENST00000586555 GPRASP1Q5JY77 1395 aa29.4■■■□□ 2.3
CIRBP-209ENST00000586555 NWD2Q9ULI1 1742 aa29.4■■■□□ 2.3
CIRBP-209ENST00000586555 CDK19Q9BWU1 502 aa29.39■■■□□ 2.3
CIRBP-209ENST00000586555 EP400Q96L91 3159 aa29.39■■■□□ 2.29
CIRBP-209ENST00000586555 PLCH1Q4KWH8 1693 aa29.38■■■□□ 2.29
CIRBP-209ENST00000586555 VPS72Q15906 364 aa29.38■■■□□ 2.29
CIRBP-209ENST00000586555 FAM83GA6ND36 823 aa29.37■■■□□ 2.29
CIRBP-209ENST00000586555 PLEKHG5O94827 1062 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms