RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
AP3D1-203ENST00000585652 NPHP1O15259 732 aa16.23■□□□□ 0.19
AP3D1-203ENST00000585652 C1orf141Q5JVX7 400 aa16.22■□□□□ 0.19
AP3D1-203ENST00000585652 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
AP3D1-203ENST00000585652 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
AP3D1-203ENST00000585652 PLCH2O75038 1416 aa16.21■□□□□ 0.19
AP3D1-203ENST00000585652 L1TD1Q5T7N2 865 aaKnown RBP16.21■□□□□ 0.19
AP3D1-203ENST00000585652 FOXD4L5Q5VV16 416 aaPredicted RBP16.21■□□□□ 0.19
AP3D1-203ENST00000585652 FOXD4L4Q8WXT5 416 aaPredicted RBP16.21■□□□□ 0.19
AP3D1-203ENST00000585652 NAP1L5Q96NT1 182 aaPredicted RBP16.21■□□□□ 0.19
AP3D1-203ENST00000585652 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
AP3D1-203ENST00000585652 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
AP3D1-203ENST00000585652 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
AP3D1-203ENST00000585652 NOS1P29475 1434 aa16.21■□□□□ 0.19
AP3D1-203ENST00000585652 TRAPPC8Q9Y2L5 1435 aa16.21■□□□□ 0.19
AP3D1-203ENST00000585652 BACH2Q9BYV9 841 aa16.2■□□□□ 0.18
AP3D1-203ENST00000585652 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
AP3D1-203ENST00000585652 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
AP3D1-203ENST00000585652 ZRSR1Q15695 479 aaKnown RBP16.2■□□□□ 0.18
AP3D1-203ENST00000585652 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
AP3D1-203ENST00000585652 ABTB2Q8N961 1025 aa16.2■□□□□ 0.18
AP3D1-203ENST00000585652 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
AP3D1-203ENST00000585652 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
AP3D1-203ENST00000585652 EIF4G3O43432 1585 aaKnown RBP16.19■□□□□ 0.18
AP3D1-203ENST00000585652 DNTTIP2Q5QJE6 756 aaKnown RBP16.19■□□□□ 0.18
AP3D1-203ENST00000585652 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
AP3D1-203ENST00000585652 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
AP3D1-203ENST00000585652 MAGI3Q5TCQ9 1506 aa16.18■□□□□ 0.18
AP3D1-203ENST00000585652 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
AP3D1-203ENST00000585652 TESK2Q96S53 571 aa16.18■□□□□ 0.18
AP3D1-203ENST00000585652 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
AP3D1-203ENST00000585652 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
AP3D1-203ENST00000585652 SCAF11Q99590 1463 aaKnown RBP16.17■□□□□ 0.18
AP3D1-203ENST00000585652 CCDC61Q9Y6R9 512 aa16.17■□□□□ 0.18
AP3D1-203ENST00000585652 PZPP20742 1482 aa16.17■□□□□ 0.18
AP3D1-203ENST00000585652 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 PRAG1Q86YV5 1406 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
AP3D1-203ENST00000585652 C22orf23Q9BZE7 217 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 HDAC5Q9UQL6 1122 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 ST18O60284 1047 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
AP3D1-203ENST00000585652 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
AP3D1-203ENST00000585652 C9orf78Q9NZ63 289 aaPredicted RBP16.16■□□□□ 0.18
AP3D1-203ENST00000585652 ATF7IPQ6VMQ6 1270 aa16.15■□□□□ 0.18
AP3D1-203ENST00000585652 AAMPQ13685 434 aa16.15■□□□□ 0.18
AP3D1-203ENST00000585652 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
AP3D1-203ENST00000585652 GPATCH3Q96I76 525 aa16.15■□□□□ 0.18
AP3D1-203ENST00000585652 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
AP3D1-203ENST00000585652 FOXD4L6Q3SYB3 417 aaPredicted RBP16.14■□□□□ 0.17
AP3D1-203ENST00000585652 FOXD4L3Q6VB84 417 aaPredicted RBP16.14■□□□□ 0.17
AP3D1-203ENST00000585652 FBLN1P23142 703 aa16.14■□□□□ 0.17
AP3D1-203ENST00000585652 ESCO1Q5FWF5 840 aa16.14■□□□□ 0.17
AP3D1-203ENST00000585652 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
AP3D1-203ENST00000585652 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
AP3D1-203ENST00000585652 NUP160Q12769 1436 aa16.14■□□□□ 0.17
AP3D1-203ENST00000585652 KDM5BQ9UGL1 1544 aa16.14■□□□□ 0.17
AP3D1-203ENST00000585652 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
AP3D1-203ENST00000585652 GSE1Q14687 1217 aa16.13■□□□□ 0.17
AP3D1-203ENST00000585652 NME9Q86XW9 330 aa16.13■□□□□ 0.17
AP3D1-203ENST00000585652 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
AP3D1-203ENST00000585652 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
AP3D1-203ENST00000585652 THEMISQ8N1K5 641 aaPredicted RBP16.12■□□□□ 0.17
AP3D1-203ENST00000585652 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
AP3D1-203ENST00000585652 FCHSD2O94868 740 aa16.12■□□□□ 0.17
AP3D1-203ENST00000585652 CEBPAP49715 358 aaPredicted RBP16.12■□□□□ 0.17
AP3D1-203ENST00000585652 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
AP3D1-203ENST00000585652 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
AP3D1-203ENST00000585652 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
AP3D1-203ENST00000585652 NLRP2Q9NX02 1062 aa16.11■□□□□ 0.17
AP3D1-203ENST00000585652 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
AP3D1-203ENST00000585652 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
AP3D1-203ENST00000585652 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
AP3D1-203ENST00000585652 MSH5O43196 834 aa16.1■□□□□ 0.17
AP3D1-203ENST00000585652 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
AP3D1-203ENST00000585652 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
AP3D1-203ENST00000585652 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
AP3D1-203ENST00000585652 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
AP3D1-203ENST00000585652 SSH1Q8WYL5 1049 aa16.09■□□□□ 0.17
AP3D1-203ENST00000585652 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
AP3D1-203ENST00000585652 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
AP3D1-203ENST00000585652 PER1O15534 1290 aaPredicted RBP16.09■□□□□ 0.17
AP3D1-203ENST00000585652 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
AP3D1-203ENST00000585652 REC8O95072 547 aa16.08■□□□□ 0.17
AP3D1-203ENST00000585652 RAPGEF4Q8WZA2 1011 aa16.08■□□□□ 0.17
AP3D1-203ENST00000585652 NEXNQ0ZGT2 675 aa16.08■□□□□ 0.16
AP3D1-203ENST00000585652 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.16
AP3D1-203ENST00000585652 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
AP3D1-203ENST00000585652 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
AP3D1-203ENST00000585652 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
AP3D1-203ENST00000585652 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
AP3D1-203ENST00000585652 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
AP3D1-203ENST00000585652 EVA1CP58658 441 aa16.07■□□□□ 0.16
AP3D1-203ENST00000585652 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
AP3D1-203ENST00000585652 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
AP3D1-203ENST00000585652 ATF3P18847 181 aa16.06■□□□□ 0.16
AP3D1-203ENST00000585652 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
AP3D1-203ENST00000585652 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
AP3D1-203ENST00000585652 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms