RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 ORAI2Q96SN7 254 aa26.11■■□□□ 1.77
SRSF1-209ENST00000585096 DDX17Q92841 729 aaKnown RBP26.1■■□□□ 1.77
SRSF1-209ENST00000585096 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
SRSF1-209ENST00000585096 KDM2AQ9Y2K7 1162 aa26.09■■□□□ 1.77
SRSF1-209ENST00000585096 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
SRSF1-209ENST00000585096 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
SRSF1-209ENST00000585096 ESCO1Q5FWF5 840 aa26.06■■□□□ 1.76
SRSF1-209ENST00000585096 NHSL1Q5SYE7 1610 aa26.06■■□□□ 1.76
SRSF1-209ENST00000585096 LAMC1P11047 1609 aa26.05■■□□□ 1.76
SRSF1-209ENST00000585096 SHPRHQ149N8 1683 aa26.04■■□□□ 1.76
SRSF1-209ENST00000585096 NUTM2BA6NNL0 878 aaPredicted RBP26.04■■□□□ 1.76
SRSF1-209ENST00000585096 NUTM2EB1AL46 878 aaPredicted RBP26.04■■□□□ 1.76
SRSF1-209ENST00000585096 NUTM2AQ8IVF1 878 aaPredicted RBP26.04■■□□□ 1.76
SRSF1-209ENST00000585096 LRP6O75581 1613 aa26.03■■□□□ 1.76
SRSF1-209ENST00000585096 KNDC1Q76NI1 1749 aa26.03■■□□□ 1.76
SRSF1-209ENST00000585096 POTEAQ6S8J7 498 aa26.03■■□□□ 1.76
SRSF1-209ENST00000585096 SOS2Q07890 1332 aaPredicted RBP26.02■■□□□ 1.76
SRSF1-209ENST00000585096 PRAM1Q96QH2 718 aa26.01■■□□□ 1.75
SRSF1-209ENST00000585096 POGKQ9P215 609 aa26.01■■□□□ 1.75
SRSF1-209ENST00000585096 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
SRSF1-209ENST00000585096 NUTM2FA1L443 756 aa26■■□□□ 1.75
SRSF1-209ENST00000585096 PNPLA6Q8IY17 1366 aa25.99■■□□□ 1.75
SRSF1-209ENST00000585096 ZNF772Q68DY9 489 aaPredicted RBP25.99■■□□□ 1.75
SRSF1-209ENST00000585096 SAFB2Q14151 953 aaKnown RBP eCLIP25.97■■□□□ 1.75
SRSF1-209ENST00000585096 FOXO3O43524 673 aa25.96■■□□□ 1.75
SRSF1-209ENST00000585096 TRAK1Q9UPV9 953 aa25.96■■□□□ 1.75
SRSF1-209ENST00000585096 ADGRB1O14514 1584 aa25.95■■□□□ 1.75
SRSF1-209ENST00000585096 DLC1Q96QB1 1528 aa25.95■■□□□ 1.74
SRSF1-209ENST00000585096 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
SRSF1-209ENST00000585096 C8orf37Q96NL8 207 aa25.88■■□□□ 1.73
SRSF1-209ENST00000585096 AFF2P51816 1311 aa25.88■■□□□ 1.73
SRSF1-209ENST00000585096 PXDNQ92626 1479 aa25.87■■□□□ 1.73
SRSF1-209ENST00000585096 ADAMTS2O95450 1211 aa25.87■■□□□ 1.73
SRSF1-209ENST00000585096 PHF8Q9UPP1 1060 aa25.87■■□□□ 1.73
SRSF1-209ENST00000585096 FMN2Q9NZ56 1722 aa25.87■■□□□ 1.73
SRSF1-209ENST00000585096 MINK1Q8N4C8 1332 aaPredicted RBP25.85■■□□□ 1.73
SRSF1-209ENST00000585096 KRT28Q7Z3Y7 464 aa25.84■■□□□ 1.73
SRSF1-209ENST00000585096 NGLY1Q96IV0 654 aa25.84■■□□□ 1.73
SRSF1-209ENST00000585096 HIRIP3Q9BW71 556 aaPredicted RBP25.84■■□□□ 1.73
SRSF1-209ENST00000585096 EIF3AQ14152 1382 aaKnown RBP25.83■■□□□ 1.73
SRSF1-209ENST00000585096 ANKARQ7Z5J8 1434 aa25.83■■□□□ 1.73
SRSF1-209ENST00000585096 RXRBP28702 533 aa25.83■■□□□ 1.73
SRSF1-209ENST00000585096 PSME1Q06323 249 aa25.83■■□□□ 1.73
SRSF1-209ENST00000585096 KIF1AQ12756 1690 aa25.81■■□□□ 1.72
SRSF1-209ENST00000585096 WASLO00401 505 aaPredicted RBP25.8■■□□□ 1.72
SRSF1-209ENST00000585096 ADGRB2O60241 1585 aa25.8■■□□□ 1.72
SRSF1-209ENST00000585096 SPATA31A3Q5VYP0 1347 aa25.8■■□□□ 1.72
SRSF1-209ENST00000585096 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
SRSF1-209ENST00000585096 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
SRSF1-209ENST00000585096 L3MBTL2Q969R5 705 aa25.77■■□□□ 1.72
SRSF1-209ENST00000585096 QTRT2Q9H974 415 aaKnown RBP25.77■■□□□ 1.72
SRSF1-209ENST00000585096 COL22A1Q8NFW1 1626 aaPredicted RBP25.77■■□□□ 1.72
SRSF1-209ENST00000585096 NBPF1Q3BBV0 1214 aa25.76■■□□□ 1.71
SRSF1-209ENST00000585096 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
SRSF1-209ENST00000585096 FNBP4Q8N3X1 1017 aaPredicted RBP25.74■■□□□ 1.71
SRSF1-209ENST00000585096 USP21Q9UK80 565 aa25.74■■□□□ 1.71
SRSF1-209ENST00000585096 SBNO1A3KN83 1393 aa25.73■■□□□ 1.71
SRSF1-209ENST00000585096 RBM6P78332 1123 aaKnown RBP25.73■■□□□ 1.71
SRSF1-209ENST00000585096 PRR36Q9H6K5 1346 aa25.72■■□□□ 1.71
SRSF1-209ENST00000585096 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
SRSF1-209ENST00000585096 TULP4Q9NRJ4 1543 aa25.72■■□□□ 1.71
SRSF1-209ENST00000585096 TNS3Q68CZ2 1445 aa25.71■■□□□ 1.71
SRSF1-209ENST00000585096 KIAA1210Q9ULL0 1709 aa25.71■■□□□ 1.71
SRSF1-209ENST00000585096 GPRASP1Q5JY77 1395 aa25.7■■□□□ 1.71
SRSF1-209ENST00000585096 LMOD2Q6P5Q4 547 aa25.7■■□□□ 1.7
SRSF1-209ENST00000585096 CDK12Q9NYV4 1490 aaPredicted RBP25.7■■□□□ 1.7
SRSF1-209ENST00000585096 HAP1P54257 671 aaPredicted RBP25.69■■□□□ 1.7
SRSF1-209ENST00000585096 TRPC5Q9UL62 973 aaPredicted RBP25.69■■□□□ 1.7
SRSF1-209ENST00000585096 USP32Q8NFA0 1604 aa25.69■■□□□ 1.7
SRSF1-209ENST00000585096 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
SRSF1-209ENST00000585096 NGDNQ8NEJ9 315 aaKnown RBP25.68■■□□□ 1.7
SRSF1-209ENST00000585096 NUDT16Q96DE0 195 aaKnown RBP25.68■■□□□ 1.7
SRSF1-209ENST00000585096 CDK19Q9BWU1 502 aa25.68■■□□□ 1.7
SRSF1-209ENST00000585096 ARHGEF28Q8N1W1 1705 aaKnown RBP25.67■■□□□ 1.7
SRSF1-209ENST00000585096 RGPD8O14715 1765 aaPredicted RBP25.66■■□□□ 1.7
SRSF1-209ENST00000585096 CENPJQ9HC77 1338 aaPredicted RBP25.64■■□□□ 1.7
SRSF1-209ENST00000585096 CABLES1Q8TDN4 633 aa25.63■■□□□ 1.69
SRSF1-209ENST00000585096 PLEKHG5O94827 1062 aa25.62■■□□□ 1.69
SRSF1-209ENST00000585096 CCDC61Q9Y6R9 512 aa25.62■■□□□ 1.69
SRSF1-209ENST00000585096 ATP7BP35670 1465 aa25.61■■□□□ 1.69
SRSF1-209ENST00000585096 ATRNO75882 1429 aa25.6■■□□□ 1.69
SRSF1-209ENST00000585096 BCL9LQ86UU0 1499 aa25.6■■□□□ 1.69
SRSF1-209ENST00000585096 PAK3O75914 559 aaPredicted RBP25.59■■□□□ 1.69
SRSF1-209ENST00000585096 RGS12O14924 1447 aa25.58■■□□□ 1.69
SRSF1-209ENST00000585096 SRPK2P78362 688 aaKnown RBP25.58■■□□□ 1.69
SRSF1-209ENST00000585096 UNC5CLQ8IV45 518 aa25.58■■□□□ 1.69
SRSF1-209ENST00000585096 ROCK2O75116 1388 aaKnown RBP25.57■■□□□ 1.68
SRSF1-209ENST00000585096 PLEKHG3A1L390 1219 aa25.56■■□□□ 1.68
SRSF1-209ENST00000585096 SLIT2O94813 1529 aa25.55■■□□□ 1.68
SRSF1-209ENST00000585096 UPF1Q92900 1129 aaKnown RBP eCLIP25.55■■□□□ 1.681e-28■□□□□ 8.2
SRSF1-209ENST00000585096 GJD4Q96KN9 370 aaPredicted RBP25.54■■□□□ 1.68
SRSF1-209ENST00000585096 ACEP12821 1306 aa25.54■■□□□ 1.68
SRSF1-209ENST00000585096 NBPF8Q3BBV2 869 aa25.53■■□□□ 1.68
SRSF1-209ENST00000585096 POLR3AO14802 1390 aaPredicted RBP25.53■■□□□ 1.68
SRSF1-209ENST00000585096 TONSLQ96HA7 1378 aa25.53■■□□□ 1.68
SRSF1-209ENST00000585096 CABP2Q9NPB3 220 aa25.52■■□□□ 1.68
SRSF1-209ENST00000585096 ITSN1Q15811 1721 aa25.51■■□□□ 1.67
SRSF1-209ENST00000585096 TRPM3Q9HCF6 1732 aaPredicted RBP25.51■■□□□ 1.67
SRSF1-209ENST00000585096 MARF1Q9Y4F3 1742 aaKnown RBP25.51■■□□□ 1.67
SRSF1-209ENST00000585096 TRPM1Q7Z4N2 1603 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms