RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 WASHC2AQ641Q2 1341 aa23.34■■□□□ 1.33
CDK5RAP3-230ENST00000584042 KCNA6P17658 529 aa23.34■■□□□ 1.33
CDK5RAP3-230ENST00000584042 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.32
CDK5RAP3-230ENST00000584042 MYOM1P52179 1685 aa23.32■■□□□ 1.32
CDK5RAP3-230ENST00000584042 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
CDK5RAP3-230ENST00000584042 C11orf95C9JLR9 678 aaPredicted RBP23.31■■□□□ 1.32
CDK5RAP3-230ENST00000584042 CDCA8Q53HL2 280 aa23.31■■□□□ 1.32
CDK5RAP3-230ENST00000584042 CDC42BPGQ6DT37 1551 aa23.31■■□□□ 1.32
CDK5RAP3-230ENST00000584042 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
CDK5RAP3-230ENST00000584042 EVC2Q86UK5 1308 aa23.29■■□□□ 1.32
CDK5RAP3-230ENST00000584042 SAFB2Q14151 953 aaKnown RBP eCLIP23.28■■□□□ 1.32
CDK5RAP3-230ENST00000584042 ADGRL3Q9HAR2 1447 aa23.27■■□□□ 1.32
CDK5RAP3-230ENST00000584042 MINK1Q8N4C8 1332 aaPredicted RBP23.27■■□□□ 1.32
CDK5RAP3-230ENST00000584042 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
CDK5RAP3-230ENST00000584042 PUS7Q96PZ0 661 aaKnown RBP23.26■■□□□ 1.31
CDK5RAP3-230ENST00000584042 FMN2Q9NZ56 1722 aa23.25■■□□□ 1.31
CDK5RAP3-230ENST00000584042 NCOA3Q9Y6Q9 1424 aa23.25■■□□□ 1.31
CDK5RAP3-230ENST00000584042 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
CDK5RAP3-230ENST00000584042 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
CDK5RAP3-230ENST00000584042 ITSN1Q15811 1721 aa23.21■■□□□ 1.31
CDK5RAP3-230ENST00000584042 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
CDK5RAP3-230ENST00000584042 ATP7BP35670 1465 aa23.2■■□□□ 1.3
CDK5RAP3-230ENST00000584042 NINLQ9Y2I6 1382 aa23.2■■□□□ 1.3
CDK5RAP3-230ENST00000584042 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
CDK5RAP3-230ENST00000584042 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
CDK5RAP3-230ENST00000584042 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
CDK5RAP3-230ENST00000584042 DCCP43146 1447 aa23.18■■□□□ 1.3
CDK5RAP3-230ENST00000584042 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
CDK5RAP3-230ENST00000584042 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
CDK5RAP3-230ENST00000584042 POLR3GLQ9BT43 218 aa23.17■■□□□ 1.3
CDK5RAP3-230ENST00000584042 TMEM94Q12767 1356 aa23.16■■□□□ 1.3
CDK5RAP3-230ENST00000584042 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
CDK5RAP3-230ENST00000584042 PROSER2Q86WR7 435 aaPredicted RBP23.15■■□□□ 1.3
CDK5RAP3-230ENST00000584042 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
CDK5RAP3-230ENST00000584042 DDX10Q13206 875 aaKnown RBP23.14■■□□□ 1.29
CDK5RAP3-230ENST00000584042 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.29
CDK5RAP3-230ENST00000584042 CABP2Q9NPB3 220 aa23.13■■□□□ 1.29
CDK5RAP3-230ENST00000584042 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
CDK5RAP3-230ENST00000584042 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.29
CDK5RAP3-230ENST00000584042 DIEXFQ68CQ4 756 aaKnown RBP23.08■■□□□ 1.29
CDK5RAP3-230ENST00000584042 ANKRD36BQ8N2N9 1353 aa23.08■■□□□ 1.29
CDK5RAP3-230ENST00000584042 RGPD8O14715 1765 aaPredicted RBP23.08■■□□□ 1.29
CDK5RAP3-230ENST00000584042 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.28
CDK5RAP3-230ENST00000584042 MSH6P52701 1360 aa23.07■■□□□ 1.28
CDK5RAP3-230ENST00000584042 C14orf37Q86TY3 774 aa23.07■■□□□ 1.28
CDK5RAP3-230ENST00000584042 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
CDK5RAP3-230ENST00000584042 CD163L1Q9NR16 1453 aa23.06■■□□□ 1.28
CDK5RAP3-230ENST00000584042 RBM33Q96EV2 1170 aaKnown RBP23.06■■□□□ 1.28
CDK5RAP3-230ENST00000584042 NUDT16Q96DE0 195 aaKnown RBP23.05■■□□□ 1.28
CDK5RAP3-230ENST00000584042 C19orf44Q9H6X5 657 aa23.05■■□□□ 1.28
CDK5RAP3-230ENST00000584042 KIF1AQ12756 1690 aa23.04■■□□□ 1.28
CDK5RAP3-230ENST00000584042 CCDC61Q9Y6R9 512 aa23.04■■□□□ 1.28
CDK5RAP3-230ENST00000584042 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
CDK5RAP3-230ENST00000584042 NRKQ7Z2Y5 1582 aa23.02■■□□□ 1.28
CDK5RAP3-230ENST00000584042 MST1RQ04912 1400 aa23.02■■□□□ 1.28
CDK5RAP3-230ENST00000584042 TMC1Q8TDI8 760 aa23.02■■□□□ 1.28
CDK5RAP3-230ENST00000584042 PANK3Q9H999 370 aa23.02■■□□□ 1.28
CDK5RAP3-230ENST00000584042 SLC12A5Q9H2X9 1139 aa23.01■■□□□ 1.27
CDK5RAP3-230ENST00000584042 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
CDK5RAP3-230ENST00000584042 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
CDK5RAP3-230ENST00000584042 CADPS2Q86UW7 1296 aa22.98■■□□□ 1.27
CDK5RAP3-230ENST00000584042 TERF2IPQ9NYB0 399 aa22.98■■□□□ 1.27
CDK5RAP3-230ENST00000584042 CABP1Q9NZU7 370 aa22.98■■□□□ 1.27
CDK5RAP3-230ENST00000584042 POLR3AO14802 1390 aaPredicted RBP22.98■■□□□ 1.27
CDK5RAP3-230ENST00000584042 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
CDK5RAP3-230ENST00000584042 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
CDK5RAP3-230ENST00000584042 ATF3P18847 181 aa22.97■■□□□ 1.27
CDK5RAP3-230ENST00000584042 KIF20BQ96Q89 1820 aa22.96■■□□□ 1.27
CDK5RAP3-230ENST00000584042 PER1O15534 1290 aaPredicted RBP22.96■■□□□ 1.27
CDK5RAP3-230ENST00000584042 HDGFL2Q7Z4V5 671 aaPredicted RBP22.96■■□□□ 1.27
CDK5RAP3-230ENST00000584042 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
CDK5RAP3-230ENST00000584042 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
CDK5RAP3-230ENST00000584042 IQSEC2Q5JU85 1478 aa22.95■■□□□ 1.26
CDK5RAP3-230ENST00000584042 ANKRD26Q9UPS8 1709 aa22.95■■□□□ 1.26
CDK5RAP3-230ENST00000584042 EDC4Q6P2E9 1401 aaKnown RBP22.94■■□□□ 1.26
CDK5RAP3-230ENST00000584042 USP6P35125 1406 aa22.92■■□□□ 1.26
CDK5RAP3-230ENST00000584042 NSD2O96028 1365 aa22.92■■□□□ 1.26
CDK5RAP3-230ENST00000584042 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
CDK5RAP3-230ENST00000584042 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
CDK5RAP3-230ENST00000584042 KNSTRNQ9Y448 316 aa22.91■■□□□ 1.26
CDK5RAP3-230ENST00000584042 ACEP12821 1306 aa22.9■■□□□ 1.26
CDK5RAP3-230ENST00000584042 PHF8Q9UPP1 1060 aa22.9■■□□□ 1.26
CDK5RAP3-230ENST00000584042 ZNF692Q9BU19 519 aaPredicted RBP22.89■■□□□ 1.25
CDK5RAP3-230ENST00000584042 BRD4O60885 1362 aaPredicted RBP22.89■■□□□ 1.25
CDK5RAP3-230ENST00000584042 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
CDK5RAP3-230ENST00000584042 ANP32CO43423 234 aa22.88■■□□□ 1.25
CDK5RAP3-230ENST00000584042 AMER1Q5JTC6 1135 aaPredicted RBP22.88■■□□□ 1.25
CDK5RAP3-230ENST00000584042 SSH2Q76I76 1423 aa22.88■■□□□ 1.25
CDK5RAP3-230ENST00000584042 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
CDK5RAP3-230ENST00000584042 PARD3Q8TEW0 1356 aa22.87■■□□□ 1.25
CDK5RAP3-230ENST00000584042 TRPM3Q9HCF6 1732 aaPredicted RBP22.86■■□□□ 1.25
CDK5RAP3-230ENST00000584042 ESCO1Q5FWF5 840 aa22.86■■□□□ 1.25
CDK5RAP3-230ENST00000584042 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
CDK5RAP3-230ENST00000584042 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
CDK5RAP3-230ENST00000584042 NHSL1Q5SYE7 1610 aa22.85■■□□□ 1.25
CDK5RAP3-230ENST00000584042 PIK3C2AO00443 1686 aa22.84■■□□□ 1.25
CDK5RAP3-230ENST00000584042 ORAI2Q96SN7 254 aa22.83■■□□□ 1.25
CDK5RAP3-230ENST00000584042 PRKRIP1Q9H875 184 aaPredicted RBP22.83■■□□□ 1.25
CDK5RAP3-230ENST00000584042 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
CDK5RAP3-230ENST00000584042 RALBP1Q15311 655 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms