RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
MSI2-218ENST00000583821 AMOTL2Q9Y2J4 779 aa12.31□□□□□ -0.44
MSI2-218ENST00000583821 ASXL1Q8IXJ9 1541 aa12.31□□□□□ -0.44
MSI2-218ENST00000583821 METP08581 1390 aa12.3□□□□□ -0.44
MSI2-218ENST00000583821 JCADQ9P266 1359 aa12.3□□□□□ -0.44
MSI2-218ENST00000583821 PROM2Q8N271 834 aa12.3□□□□□ -0.44
MSI2-218ENST00000583821 MST1RQ04912 1400 aa12.28□□□□□ -0.44
MSI2-218ENST00000583821 ATF3P18847 181 aa12.27□□□□□ -0.45
MSI2-218ENST00000583821 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.45
MSI2-218ENST00000583821 HFM1A2PYH4 1435 aa12.27□□□□□ -0.45
MSI2-218ENST00000583821 DCCP43146 1447 aa12.27□□□□□ -0.45
MSI2-218ENST00000583821 IFT172Q9UG01 1749 aa12.26□□□□□ -0.45
MSI2-218ENST00000583821 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
MSI2-218ENST00000583821 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
MSI2-218ENST00000583821 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
MSI2-218ENST00000583821 ADGRL3Q9HAR2 1447 aa12.26□□□□□ -0.45
MSI2-218ENST00000583821 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
MSI2-218ENST00000583821 LAMC1P11047 1609 aa12.22□□□□□ -0.45
MSI2-218ENST00000583821 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
MSI2-218ENST00000583821 MEX3CQ5U5Q3 659 aaKnown RBP12.22□□□□□ -0.45
MSI2-218ENST00000583821 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
MSI2-218ENST00000583821 PTCH1Q13635 1447 aa12.21□□□□□ -0.45
MSI2-218ENST00000583821 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
MSI2-218ENST00000583821 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.45
MSI2-218ENST00000583821 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.45
MSI2-218ENST00000583821 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.45
MSI2-218ENST00000583821 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
MSI2-218ENST00000583821 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
MSI2-218ENST00000583821 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
MSI2-218ENST00000583821 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
MSI2-218ENST00000583821 PRAG1Q86YV5 1406 aa12.18□□□□□ -0.46
MSI2-218ENST00000583821 CDC42BPGQ6DT37 1551 aa12.18□□□□□ -0.46
MSI2-218ENST00000583821 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
MSI2-218ENST00000583821 MARF1Q9Y4F3 1742 aaKnown RBP12.16□□□□□ -0.46
MSI2-218ENST00000583821 COL22A1Q8NFW1 1626 aaPredicted RBP12.15□□□□□ -0.46
MSI2-218ENST00000583821 AFF2P51816 1311 aa12.15□□□□□ -0.46
MSI2-218ENST00000583821 FMN2Q9NZ56 1722 aa12.15□□□□□ -0.46
MSI2-218ENST00000583821 SPATA31E1Q6ZUB1 1445 aa12.15□□□□□ -0.46
MSI2-218ENST00000583821 VGFO15240 615 aaPredicted RBP12.15□□□□□ -0.46
MSI2-218ENST00000583821 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
MSI2-218ENST00000583821 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
MSI2-218ENST00000583821 CCDC144AA2RUR9 1427 aa12.14□□□□□ -0.47
MSI2-218ENST00000583821 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
MSI2-218ENST00000583821 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
MSI2-218ENST00000583821 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
MSI2-218ENST00000583821 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
MSI2-218ENST00000583821 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
MSI2-218ENST00000583821 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
MSI2-218ENST00000583821 RGS12O14924 1447 aa12.12□□□□□ -0.47
MSI2-218ENST00000583821 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
MSI2-218ENST00000583821 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
MSI2-218ENST00000583821 EP400Q96L91 3159 aa12.12□□□□□ -0.47
MSI2-218ENST00000583821 PXDNQ92626 1479 aa12.11□□□□□ -0.47
MSI2-218ENST00000583821 CDK12Q9NYV4 1490 aaPredicted RBP12.11□□□□□ -0.47
MSI2-218ENST00000583821 RGL3Q3MIN7 710 aa12.11□□□□□ -0.47
MSI2-218ENST00000583821 PIK3C2GO75747 1445 aa12.11□□□□□ -0.47
MSI2-218ENST00000583821 PLEKHH1Q9ULM0 1364 aa12.1□□□□□ -0.47
MSI2-218ENST00000583821 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
MSI2-218ENST00000583821 STK26Q9P289 416 aa12.1□□□□□ -0.47
MSI2-218ENST00000583821 TECPR2O15040 1411 aa12.1□□□□□ -0.47
MSI2-218ENST00000583821 RXRBP28702 533 aa12.09□□□□□ -0.47
MSI2-218ENST00000583821 MPHOSPH9Q99550 1183 aa12.09□□□□□ -0.47
MSI2-218ENST00000583821 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
MSI2-218ENST00000583821 SOS2Q07890 1332 aaPredicted RBP12.09□□□□□ -0.47
MSI2-218ENST00000583821 LRPPRCP42704 1394 aaKnown RBP12.08□□□□□ -0.48
MSI2-218ENST00000583821 TMEM132EQ6IEE7 984 aa12.08□□□□□ -0.48
MSI2-218ENST00000583821 POTEHQ6S545 545 aa12.08□□□□□ -0.48
MSI2-218ENST00000583821 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
MSI2-218ENST00000583821 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
MSI2-218ENST00000583821 ABCA3Q99758 1704 aa12.08□□□□□ -0.48
MSI2-218ENST00000583821 MYOM2P54296 1465 aa12.08□□□□□ -0.48
MSI2-218ENST00000583821 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
MSI2-218ENST00000583821 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
MSI2-218ENST00000583821 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
MSI2-218ENST00000583821 YTHDC2Q9H6S0 1430 aaKnown RBP12.06□□□□□ -0.48
MSI2-218ENST00000583821 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
MSI2-218ENST00000583821 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
MSI2-218ENST00000583821 USP32Q8NFA0 1604 aa12.05□□□□□ -0.48
MSI2-218ENST00000583821 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
MSI2-218ENST00000583821 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
MSI2-218ENST00000583821 QTRT2Q9H974 415 aaKnown RBP12.05□□□□□ -0.48
MSI2-218ENST00000583821 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
MSI2-218ENST00000583821 SRCAPQ6ZRS2 3230 aa12.04□□□□□ -0.48
MSI2-218ENST00000583821 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
MSI2-218ENST00000583821 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
MSI2-218ENST00000583821 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
MSI2-218ENST00000583821 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
MSI2-218ENST00000583821 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
MSI2-218ENST00000583821 RAB3GAP2Q9H2M9 1393 aa12.03□□□□□ -0.48
MSI2-218ENST00000583821 ATRNO75882 1429 aa12.03□□□□□ -0.48
MSI2-218ENST00000583821 BRWD3Q6RI45 1802 aa12.02□□□□□ -0.48
MSI2-218ENST00000583821 FOXO3O43524 673 aa12.02□□□□□ -0.49
MSI2-218ENST00000583821 USP21Q9UK80 565 aa12.01□□□□□ -0.49
MSI2-218ENST00000583821 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
MSI2-218ENST00000583821 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
MSI2-218ENST00000583821 GLI3P10071 1580 aa12.01□□□□□ -0.49
MSI2-218ENST00000583821 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
MSI2-218ENST00000583821 BCL9LQ86UU0 1499 aa12□□□□□ -0.49
MSI2-218ENST00000583821 TRPM3Q9HCF6 1732 aaPredicted RBP12□□□□□ -0.49
MSI2-218ENST00000583821 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms