RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.66
ITGB4-209ENST00000583327 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.14■□□□□ 0.66
ITGB4-209ENST00000583327 TMF1P82094 1093 aa19.12■□□□□ 0.65
ITGB4-209ENST00000583327 SAFB2Q14151 953 aaKnown RBP eCLIP19.12■□□□□ 0.65
ITGB4-209ENST00000583327 PROSER2Q86WR7 435 aaPredicted RBP19.12■□□□□ 0.65
ITGB4-209ENST00000583327 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
ITGB4-209ENST00000583327 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
ITGB4-209ENST00000583327 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
ITGB4-209ENST00000583327 LRRC7Q96NW7 1537 aa19.1■□□□□ 0.65
ITGB4-209ENST00000583327 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
ITGB4-209ENST00000583327 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
ITGB4-209ENST00000583327 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
ITGB4-209ENST00000583327 EVC2Q86UK5 1308 aa19.09■□□□□ 0.65
ITGB4-209ENST00000583327 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
ITGB4-209ENST00000583327 TMEM94Q12767 1356 aa19.08■□□□□ 0.65
ITGB4-209ENST00000583327 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.65
ITGB4-209ENST00000583327 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.64
ITGB4-209ENST00000583327 CCDC7Q96M83 1385 aa19.07■□□□□ 0.64
ITGB4-209ENST00000583327 RBM33Q96EV2 1170 aaKnown RBP19.07■□□□□ 0.64
ITGB4-209ENST00000583327 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
ITGB4-209ENST00000583327 CDCA8Q53HL2 280 aa19.06■□□□□ 0.64
ITGB4-209ENST00000583327 C19orf44Q9H6X5 657 aa19.05■□□□□ 0.64
ITGB4-209ENST00000583327 NALCNQ8IZF0 1738 aa19.04■□□□□ 0.64
ITGB4-209ENST00000583327 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
ITGB4-209ENST00000583327 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.64
ITGB4-209ENST00000583327 CABP2Q9NPB3 220 aa19.02■□□□□ 0.64
ITGB4-209ENST00000583327 DCCP43146 1447 aa19.01■□□□□ 0.63
ITGB4-209ENST00000583327 PRR36Q9H6K5 1346 aa19■□□□□ 0.63
ITGB4-209ENST00000583327 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
ITGB4-209ENST00000583327 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
ITGB4-209ENST00000583327 NUDT16Q96DE0 195 aaKnown RBP18.98■□□□□ 0.63
ITGB4-209ENST00000583327 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
ITGB4-209ENST00000583327 ATP7BP35670 1465 aa18.97■□□□□ 0.63
ITGB4-209ENST00000583327 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
ITGB4-209ENST00000583327 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
ITGB4-209ENST00000583327 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
ITGB4-209ENST00000583327 MSH6P52701 1360 aa18.96■□□□□ 0.63
ITGB4-209ENST00000583327 NINLQ9Y2I6 1382 aa18.95■□□□□ 0.62
ITGB4-209ENST00000583327 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
ITGB4-209ENST00000583327 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
ITGB4-209ENST00000583327 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
ITGB4-209ENST00000583327 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
ITGB4-209ENST00000583327 MST1RQ04912 1400 aa18.93■□□□□ 0.62
ITGB4-209ENST00000583327 MYOM1P52179 1685 aa18.93■□□□□ 0.62
ITGB4-209ENST00000583327 ATF3P18847 181 aa18.93■□□□□ 0.62
ITGB4-209ENST00000583327 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
ITGB4-209ENST00000583327 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
ITGB4-209ENST00000583327 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
ITGB4-209ENST00000583327 C1orf167Q5SNV9 1468 aa18.91■□□□□ 0.62
ITGB4-209ENST00000583327 DDX10Q13206 875 aaKnown RBP18.91■□□□□ 0.62
ITGB4-209ENST00000583327 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
ITGB4-209ENST00000583327 PER1O15534 1290 aaPredicted RBP18.9■□□□□ 0.62
ITGB4-209ENST00000583327 POLR3GLQ9BT43 218 aa18.9■□□□□ 0.62
ITGB4-209ENST00000583327 CPSF1Q10570 1443 aaKnown RBP18.9■□□□□ 0.62
ITGB4-209ENST00000583327 PPIP5K1Q6PFW1 1433 aa18.9■□□□□ 0.62
ITGB4-209ENST00000583327 NUTM2FA1L443 756 aa18.89■□□□□ 0.61
ITGB4-209ENST00000583327 PANK3Q9H999 370 aa18.89■□□□□ 0.61
ITGB4-209ENST00000583327 SLAIN2Q9P270 581 aa18.88■□□□□ 0.61
ITGB4-209ENST00000583327 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
ITGB4-209ENST00000583327 ANKRD36BQ8N2N9 1353 aa18.88■□□□□ 0.61
ITGB4-209ENST00000583327 RGPD8O14715 1765 aaPredicted RBP18.87■□□□□ 0.61
ITGB4-209ENST00000583327 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
ITGB4-209ENST00000583327 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
ITGB4-209ENST00000583327 CERKQ8TCT0 537 aa18.86■□□□□ 0.61
ITGB4-209ENST00000583327 ORAI2Q96SN7 254 aa18.86■□□□□ 0.61
ITGB4-209ENST00000583327 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
ITGB4-209ENST00000583327 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
ITGB4-209ENST00000583327 ACEP12821 1306 aa18.85■□□□□ 0.61
ITGB4-209ENST00000583327 ITSN1Q15811 1721 aa18.85■□□□□ 0.61
ITGB4-209ENST00000583327 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
ITGB4-209ENST00000583327 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
ITGB4-209ENST00000583327 ESCO1Q5FWF5 840 aa18.83■□□□□ 0.6
ITGB4-209ENST00000583327 SSH2Q76I76 1423 aa18.83■□□□□ 0.6
ITGB4-209ENST00000583327 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
ITGB4-209ENST00000583327 BRINP3Q76B58 766 aa18.81■□□□□ 0.6
ITGB4-209ENST00000583327 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
ITGB4-209ENST00000583327 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
ITGB4-209ENST00000583327 BRD4O60885 1362 aaPredicted RBP18.79■□□□□ 0.6
ITGB4-209ENST00000583327 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
ITGB4-209ENST00000583327 USP6P35125 1406 aa18.78■□□□□ 0.6
ITGB4-209ENST00000583327 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
ITGB4-209ENST00000583327 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
ITGB4-209ENST00000583327 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
ITGB4-209ENST00000583327 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
ITGB4-209ENST00000583327 EDC4Q6P2E9 1401 aaKnown RBP18.77■□□□□ 0.6
ITGB4-209ENST00000583327 TOM1O60784 492 aa18.77■□□□□ 0.6
ITGB4-209ENST00000583327 MON2Q7Z3U7 1717 aa18.77■□□□□ 0.59
ITGB4-209ENST00000583327 FOXO3O43524 673 aa18.76■□□□□ 0.59
ITGB4-209ENST00000583327 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
ITGB4-209ENST00000583327 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
ITGB4-209ENST00000583327 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
ITGB4-209ENST00000583327 NRKQ7Z2Y5 1582 aa18.74■□□□□ 0.59
ITGB4-209ENST00000583327 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
ITGB4-209ENST00000583327 NPHP3Q7Z494 1330 aa18.74■□□□□ 0.59
ITGB4-209ENST00000583327 FYB1O15117 783 aa18.73■□□□□ 0.59
ITGB4-209ENST00000583327 PSME1Q06323 249 aa18.73■□□□□ 0.59
ITGB4-209ENST00000583327 KRT28Q7Z3Y7 464 aa18.73■□□□□ 0.59
ITGB4-209ENST00000583327 SOS2Q07890 1332 aaPredicted RBP18.73■□□□□ 0.59
ITGB4-209ENST00000583327 TTC21AQ8NDW8 1320 aa18.73■□□□□ 0.59
ITGB4-209ENST00000583327 PXDNQ92626 1479 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms