RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
SRSF1-205ENST00000582730 NBR1Q14596 966 aa17.95■□□□□ 0.46
SRSF1-205ENST00000582730 POGKQ9P215 609 aa17.95■□□□□ 0.46
SRSF1-205ENST00000582730 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
SRSF1-205ENST00000582730 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
SRSF1-205ENST00000582730 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
SRSF1-205ENST00000582730 PRKCSHP14314 528 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-205ENST00000582730 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
SRSF1-205ENST00000582730 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
SRSF1-205ENST00000582730 CRBNQ96SW2 442 aa17.94■□□□□ 0.46
SRSF1-205ENST00000582730 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
SRSF1-205ENST00000582730 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
SRSF1-205ENST00000582730 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
SRSF1-205ENST00000582730 PRAM1Q96QH2 718 aa17.92■□□□□ 0.46
SRSF1-205ENST00000582730 C20orf194Q5TEA3 1177 aa17.91■□□□□ 0.46
SRSF1-205ENST00000582730 ZNF521Q96K83 1311 aa17.91■□□□□ 0.46
SRSF1-205ENST00000582730 MTHFSP49914 203 aa17.9■□□□□ 0.46
SRSF1-205ENST00000582730 ARHGEF28Q8N1W1 1705 aaKnown RBP17.9■□□□□ 0.46
SRSF1-205ENST00000582730 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
SRSF1-205ENST00000582730 SLFN5Q08AF3 891 aa17.89■□□□□ 0.46
SRSF1-205ENST00000582730 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
SRSF1-205ENST00000582730 RRP7AQ9Y3A4 280 aaKnown RBP17.89■□□□□ 0.45
SRSF1-205ENST00000582730 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.45
SRSF1-205ENST00000582730 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
SRSF1-205ENST00000582730 TMEM131LA2VDJ0 1609 aa17.88■□□□□ 0.45
SRSF1-205ENST00000582730 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
SRSF1-205ENST00000582730 ANKRD36BQ8N2N9 1353 aa17.87■□□□□ 0.45
SRSF1-205ENST00000582730 ZFYVE9O95405 1425 aa17.87■□□□□ 0.45
SRSF1-205ENST00000582730 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
SRSF1-205ENST00000582730 YTHDC2Q9H6S0 1430 aaKnown RBP17.85■□□□□ 0.45
SRSF1-205ENST00000582730 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.85■□□□□ 0.45
SRSF1-205ENST00000582730 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
SRSF1-205ENST00000582730 E9PSI1 815 aa17.84■□□□□ 0.45
SRSF1-205ENST00000582730 A0A1W2PP64 1363 aa17.83■□□□□ 0.45
SRSF1-205ENST00000582730 CLTCQ00610 1675 aaKnown RBP17.83■□□□□ 0.44
SRSF1-205ENST00000582730 PUS7Q96PZ0 661 aaKnown RBP17.83■□□□□ 0.44
SRSF1-205ENST00000582730 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
SRSF1-205ENST00000582730 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.444e-9■■□□□ 14.5
SRSF1-205ENST00000582730 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
SRSF1-205ENST00000582730 TCP11L2Q8N4U5 519 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 PTPRMP28827 1452 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 BCAR3O75815 825 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
SRSF1-205ENST00000582730 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
SRSF1-205ENST00000582730 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
SRSF1-205ENST00000582730 ANP32AP39687 249 aaKnown RBP17.8■□□□□ 0.44
SRSF1-205ENST00000582730 SKAP1Q86WV1 359 aa17.8■□□□□ 0.44
SRSF1-205ENST00000582730 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
SRSF1-205ENST00000582730 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
SRSF1-205ENST00000582730 ATAD2Q6PL18 1390 aa17.8■□□□□ 0.44
SRSF1-205ENST00000582730 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
SRSF1-205ENST00000582730 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
SRSF1-205ENST00000582730 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
SRSF1-205ENST00000582730 NSD2O96028 1365 aa17.78■□□□□ 0.44
SRSF1-205ENST00000582730 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
SRSF1-205ENST00000582730 CABP1Q9NZU7 370 aa17.78■□□□□ 0.44
SRSF1-205ENST00000582730 RIMS2Q9UQ26 1411 aa17.78■□□□□ 0.44
SRSF1-205ENST00000582730 AGLP35573 1532 aa17.78■□□□□ 0.44
SRSF1-205ENST00000582730 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
SRSF1-205ENST00000582730 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
SRSF1-205ENST00000582730 TCERG1O14776 1098 aaKnown RBP17.76■□□□□ 0.43
SRSF1-205ENST00000582730 USP32Q8NFA0 1604 aa17.76■□□□□ 0.43
SRSF1-205ENST00000582730 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
SRSF1-205ENST00000582730 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
SRSF1-205ENST00000582730 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
SRSF1-205ENST00000582730 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
SRSF1-205ENST00000582730 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
SRSF1-205ENST00000582730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
SRSF1-205ENST00000582730 SHPRHQ149N8 1683 aa17.76■□□□□ 0.43
SRSF1-205ENST00000582730 FYB1O15117 783 aa17.74■□□□□ 0.43
SRSF1-205ENST00000582730 PLPPR3Q6T4P5 718 aa17.74■□□□□ 0.43
SRSF1-205ENST00000582730 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
SRSF1-205ENST00000582730 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
SRSF1-205ENST00000582730 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
SRSF1-205ENST00000582730 ZMYM3Q14202 1370 aa17.73■□□□□ 0.43
SRSF1-205ENST00000582730 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
SRSF1-205ENST00000582730 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
SRSF1-205ENST00000582730 ARHGEF40Q8TER5 1519 aa17.71■□□□□ 0.43
SRSF1-205ENST00000582730 PDE4AP27815 886 aa17.7■□□□□ 0.42
SRSF1-205ENST00000582730 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
SRSF1-205ENST00000582730 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
SRSF1-205ENST00000582730 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
SRSF1-205ENST00000582730 FBLN1P23142 703 aa17.69■□□□□ 0.42
SRSF1-205ENST00000582730 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
SRSF1-205ENST00000582730 CD163L1Q9NR16 1453 aa17.68■□□□□ 0.42
SRSF1-205ENST00000582730 CENPQQ7L2Z9 268 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-205ENST00000582730 PANK1Q8TE04 598 aa17.68■□□□□ 0.42
SRSF1-205ENST00000582730 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
SRSF1-205ENST00000582730 KIF13AQ9H1H9 1805 aa17.67■□□□□ 0.42
SRSF1-205ENST00000582730 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
SRSF1-205ENST00000582730 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
SRSF1-205ENST00000582730 METP08581 1390 aa17.67■□□□□ 0.42
SRSF1-205ENST00000582730 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
SRSF1-205ENST00000582730 MS4A1P11836 297 aa17.65■□□□□ 0.42
SRSF1-205ENST00000582730 KDM2BQ8NHM5 1336 aa17.65■□□□□ 0.42
SRSF1-205ENST00000582730 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
SRSF1-205ENST00000582730 MYH16Q9H6N6 1097 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms