RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 FAM135BQ49AJ0 1406 aa17.61■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 WAPLQ7Z5K2 1190 aa17.6■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 PLEKHH1Q9ULM0 1364 aa17.59■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 NALCNQ8IZF0 1738 aa17.58■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 PRAM1Q96QH2 718 aa17.58■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 ARHGEF28Q8N1W1 1705 aaKnown RBP17.57■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 POGKQ9P215 609 aa17.57■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 GPRASP1Q5JY77 1395 aa17.57■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 TOM1O60784 492 aa17.56■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 SAFB2Q14151 953 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 DCCP43146 1447 aa17.54■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 ATF3P18847 181 aa17.54■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 CADPS2Q86UW7 1296 aa17.54■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
CCDC144NL-AS1-216ENST00000582583 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 CDC42BPGQ6DT37 1551 aa17.5■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 PIP4K2BP78356 416 aa17.49■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 MINK1Q8N4C8 1332 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 CENPJQ9HC77 1338 aaPredicted RBP17.49■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 SLAIN2Q9P270 581 aa17.48■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 ADGRB2O60241 1585 aa17.48■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 MST1RQ04912 1400 aa17.47■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 QRICH2Q9H0J4 1663 aa17.46■□□□□ 0.39
CCDC144NL-AS1-216ENST00000582583 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 USP47Q96K76 1375 aa17.43■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 WASLO00401 505 aaPredicted RBP17.42■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 BRINP3Q76B58 766 aa17.4■□□□□ 0.38
CCDC144NL-AS1-216ENST00000582583 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 ILDR1Q86SU0 546 aaPredicted RBP17.39■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 TULP4Q9NRJ4 1543 aa17.39■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 SBNO2Q9Y2G9 1366 aa17.39■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 CDK19Q9BWU1 502 aa17.39■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 USP32Q8NFA0 1604 aa17.37■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 RGPD8O14715 1765 aaPredicted RBP17.36■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 ATP7BP35670 1465 aa17.35■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 TESK2Q96S53 571 aa17.35■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 HSPA1LP34931 641 aa17.34■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 NUDT16Q96DE0 195 aaKnown RBP17.34■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 CABP2Q9NPB3 220 aa17.34■□□□□ 0.37
CCDC144NL-AS1-216ENST00000582583 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 PHF8Q9UPP1 1060 aa17.32■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 FOXO3O43524 673 aa17.29■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 NPHP3Q7Z494 1330 aa17.29■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 TMF1P82094 1093 aa17.29■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 PPIP5K1Q6PFW1 1433 aa17.28■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 COL16A1Q07092 1604 aaPredicted RBP17.28■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 DISP3Q9P2K9 1392 aa17.27■□□□□ 0.36
CCDC144NL-AS1-216ENST00000582583 NGDNQ8NEJ9 315 aaKnown RBP17.26■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 PXDNQ92626 1479 aa17.25■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 PSME1Q06323 249 aa17.24■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 ACEP12821 1306 aa17.24■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
CCDC144NL-AS1-216ENST00000582583 JCADQ9P266 1359 aa17.2■□□□□ 0.34
CCDC144NL-AS1-216ENST00000582583 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
CCDC144NL-AS1-216ENST00000582583 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
CCDC144NL-AS1-216ENST00000582583 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
CCDC144NL-AS1-216ENST00000582583 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
CCDC144NL-AS1-216ENST00000582583 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
CCDC144NL-AS1-216ENST00000582583 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms