RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 DCCP43146 1447 aa29.72■■■□□ 2.35
PPP4R1-221ENST00000582240 MST1RQ04912 1400 aa29.72■■■□□ 2.35
PPP4R1-221ENST00000582240 NUTM2FA1L443 756 aa29.72■■■□□ 2.35
PPP4R1-221ENST00000582240 ROBO1Q9Y6N7 1651 aa29.72■■■□□ 2.35
PPP4R1-221ENST00000582240 BRINP3Q76B58 766 aa29.69■■■□□ 2.34
PPP4R1-221ENST00000582240 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
PPP4R1-221ENST00000582240 DLC1Q96QB1 1528 aa29.66■■■□□ 2.34
PPP4R1-221ENST00000582240 ORAI2Q96SN7 254 aa29.66■■■□□ 2.34
PPP4R1-221ENST00000582240 HIRIP3Q9BW71 556 aaPredicted RBP29.66■■■□□ 2.34
PPP4R1-221ENST00000582240 MINK1Q8N4C8 1332 aaPredicted RBP29.66■■■□□ 2.34
PPP4R1-221ENST00000582240 DDX17Q92841 729 aaKnown RBP29.65■■■□□ 2.34
PPP4R1-221ENST00000582240 C1orf167Q5SNV9 1468 aa29.64■■■□□ 2.34
PPP4R1-221ENST00000582240 KIAA1210Q9ULL0 1709 aa29.62■■■□□ 2.33
PPP4R1-221ENST00000582240 ROCK2O75116 1388 aaKnown RBP29.58■■■□□ 2.33
PPP4R1-221ENST00000582240 ESCO1Q5FWF5 840 aa29.58■■■□□ 2.33
PPP4R1-221ENST00000582240 CDC42BPGQ6DT37 1551 aa29.58■■■□□ 2.33
PPP4R1-221ENST00000582240 TRPM1Q7Z4N2 1603 aa29.57■■■□□ 2.32
PPP4R1-221ENST00000582240 CLSPNQ9HAW4 1339 aa29.55■■■□□ 2.32
PPP4R1-221ENST00000582240 ARHGEF28Q8N1W1 1705 aaKnown RBP29.54■■■□□ 2.32
PPP4R1-221ENST00000582240 PHLPP1O60346 1717 aa29.53■■■□□ 2.32
PPP4R1-221ENST00000582240 WASLO00401 505 aaPredicted RBP29.5■■■□□ 2.31
PPP4R1-221ENST00000582240 FMN2Q9NZ56 1722 aa29.49■■■□□ 2.31
PPP4R1-221ENST00000582240 CENPJQ9HC77 1338 aaPredicted RBP29.48■■■□□ 2.31
PPP4R1-221ENST00000582240 CARD11Q9BXL7 1154 aa29.48■■■□□ 2.31
PPP4R1-221ENST00000582240 AHDC1Q5TGY3 1603 aaPredicted RBP29.48■■■□□ 2.31
PPP4R1-221ENST00000582240 XPCQ01831 940 aaPredicted RBP29.47■■■□□ 2.31
PPP4R1-221ENST00000582240 COL16A1Q07092 1604 aaPredicted RBP29.46■■■□□ 2.31
PPP4R1-221ENST00000582240 FOXO3O43524 673 aa29.46■■■□□ 2.31
PPP4R1-221ENST00000582240 PRR36Q9H6K5 1346 aa29.45■■■□□ 2.31
PPP4R1-221ENST00000582240 CDK19Q9BWU1 502 aa29.45■■■□□ 2.31
PPP4R1-221ENST00000582240 GPRASP1Q5JY77 1395 aa29.44■■■□□ 2.3
PPP4R1-221ENST00000582240 ADGRB2O60241 1585 aa29.43■■■□□ 2.3
PPP4R1-221ENST00000582240 RALGAPBQ86X10 1494 aa29.43■■■□□ 2.3
PPP4R1-221ENST00000582240 PMFBP1Q8TBY8 1022 aa29.43■■■□□ 2.3
PPP4R1-221ENST00000582240 PHF8Q9UPP1 1060 aa29.42■■■□□ 2.3
PPP4R1-221ENST00000582240 NHSL1Q5SYE7 1610 aa29.42■■■□□ 2.3
PPP4R1-221ENST00000582240 JCADQ9P266 1359 aa29.4■■■□□ 2.3
PPP4R1-221ENST00000582240 TIMELESSQ9UNS1 1208 aa29.4■■■□□ 2.3
PPP4R1-221ENST00000582240 RGPD8O14715 1765 aaPredicted RBP29.39■■■□□ 2.3
PPP4R1-221ENST00000582240 USP32Q8NFA0 1604 aa29.38■■■□□ 2.29
PPP4R1-221ENST00000582240 LRRC59Q96AG4 307 aaKnown RBP29.38■■■□□ 2.29
PPP4R1-221ENST00000582240 NUDT16Q96DE0 195 aaKnown RBP29.38■■■□□ 2.29
PPP4R1-221ENST00000582240 SOS2Q07890 1332 aaPredicted RBP29.38■■■□□ 2.29
PPP4R1-221ENST00000582240 NPHP3Q7Z494 1330 aa29.37■■■□□ 2.29
PPP4R1-221ENST00000582240 DISP3Q9P2K9 1392 aa29.37■■■□□ 2.29
PPP4R1-221ENST00000582240 CABP2Q9NPB3 220 aa29.36■■■□□ 2.29
PPP4R1-221ENST00000582240 ANKARQ7Z5J8 1434 aa29.36■■■□□ 2.29
PPP4R1-221ENST00000582240 TULP4Q9NRJ4 1543 aa29.35■■■□□ 2.29
PPP4R1-221ENST00000582240 SRPK2P78362 688 aaKnown RBP29.34■■■□□ 2.29
PPP4R1-221ENST00000582240 KRT28Q7Z3Y7 464 aa29.34■■■□□ 2.29
PPP4R1-221ENST00000582240 MED1Q15648 1581 aaPredicted RBP29.34■■■□□ 2.29
PPP4R1-221ENST00000582240 QRICH2Q9H0J4 1663 aa29.34■■■□□ 2.29
PPP4R1-221ENST00000582240 NUTM2BA6NNL0 878 aaPredicted RBP29.33■■■□□ 2.29
PPP4R1-221ENST00000582240 NUTM2EB1AL46 878 aaPredicted RBP29.33■■■□□ 2.29
PPP4R1-221ENST00000582240 NUTM2AQ8IVF1 878 aaPredicted RBP29.33■■■□□ 2.29
PPP4R1-221ENST00000582240 EIF3AQ14152 1382 aaKnown RBP29.33■■■□□ 2.29
PPP4R1-221ENST00000582240 PXDNQ92626 1479 aa29.3■■■□□ 2.28
PPP4R1-221ENST00000582240 ATP7BP35670 1465 aa29.29■■■□□ 2.28
PPP4R1-221ENST00000582240 PNPLA6Q8IY17 1366 aa29.29■■■□□ 2.28
PPP4R1-221ENST00000582240 PSME1Q06323 249 aa29.29■■■□□ 2.28
PPP4R1-221ENST00000582240 NGDNQ8NEJ9 315 aaKnown RBP29.28■■■□□ 2.28
PPP4R1-221ENST00000582240 EVC2Q86UK5 1308 aa29.26■■■□□ 2.27
PPP4R1-221ENST00000582240 KIF1AQ12756 1690 aa29.26■■■□□ 2.27
PPP4R1-221ENST00000582240 ST20-MTHFSA0A0A6YYL1 179 aa29.26■■■□□ 2.27
PPP4R1-221ENST00000582240 PLEKHG5O94827 1062 aa29.25■■■□□ 2.27
PPP4R1-221ENST00000582240 CCDC61Q9Y6R9 512 aa29.25■■■□□ 2.27
PPP4R1-221ENST00000582240 SPATA31A6Q5VVP1 1343 aa29.24■■■□□ 2.27
PPP4R1-221ENST00000582240 LRP6O75581 1613 aa29.23■■■□□ 2.27
PPP4R1-221ENST00000582240 PHF23Q9BUL5 403 aaPredicted RBP29.23■■■□□ 2.27
PPP4R1-221ENST00000582240 SHPRHQ149N8 1683 aa29.23■■■□□ 2.27
PPP4R1-221ENST00000582240 LMOD2Q6P5Q4 547 aa29.22■■■□□ 2.27
PPP4R1-221ENST00000582240 SPATA31A3Q5VYP0 1347 aa29.21■■■□□ 2.27
PPP4R1-221ENST00000582240 ACEP12821 1306 aa29.2■■■□□ 2.27
PPP4R1-221ENST00000582240 MEX3CQ5U5Q3 659 aaKnown RBP29.2■■■□□ 2.26
PPP4R1-221ENST00000582240 CABP1Q9NZU7 370 aa29.2■■■□□ 2.26
PPP4R1-221ENST00000582240 USP47Q96K76 1375 aa29.19■■■□□ 2.26
PPP4R1-221ENST00000582240 PLEKHG3A1L390 1219 aa29.19■■■□□ 2.26
PPP4R1-221ENST00000582240 PPIP5K1Q6PFW1 1433 aa29.18■■■□□ 2.26
PPP4R1-221ENST00000582240 TESK2Q96S53 571 aa29.17■■■□□ 2.26
PPP4R1-221ENST00000582240 PAK3O75914 559 aaPredicted RBP29.16■■■□□ 2.26
PPP4R1-221ENST00000582240 ADAMTS2O95450 1211 aa29.16■■■□□ 2.26
PPP4R1-221ENST00000582240 RGS17Q9UGC6 210 aaPredicted RBP29.16■■■□□ 2.26
PPP4R1-221ENST00000582240 SBNO1A3KN83 1393 aa29.14■■■□□ 2.26
PPP4R1-221ENST00000582240 SBNO2Q9Y2G9 1366 aa29.14■■■□□ 2.26
PPP4R1-221ENST00000582240 CABLES1Q8TDN4 633 aa29.14■■■□□ 2.26
PPP4R1-221ENST00000582240 TOPAZ1Q8N9V7 1692 aa29.14■■■□□ 2.26
PPP4R1-221ENST00000582240 TNS3Q68CZ2 1445 aa29.13■■■□□ 2.25
PPP4R1-221ENST00000582240 ITSN1Q15811 1721 aa29.13■■■□□ 2.25
PPP4R1-221ENST00000582240 POLR3AO14802 1390 aaPredicted RBP29.12■■■□□ 2.25
PPP4R1-221ENST00000582240 ILDR2Q71H61 639 aa29.11■■■□□ 2.25
PPP4R1-221ENST00000582240 C8orf37Q96NL8 207 aa29.09■■■□□ 2.25
PPP4R1-221ENST00000582240 NUTM2GQ5VZR2 741 aa29.08■■■□□ 2.25
PPP4R1-221ENST00000582240 TMC1Q8TDI8 760 aa29.07■■■□□ 2.24
PPP4R1-221ENST00000582240 TRPM3Q9HCF6 1732 aaPredicted RBP29.07■■■□□ 2.24
PPP4R1-221ENST00000582240 COL22A1Q8NFW1 1626 aaPredicted RBP29.05■■■□□ 2.24
PPP4R1-221ENST00000582240 ATAD2Q6PL18 1390 aa29.05■■■□□ 2.24
PPP4R1-221ENST00000582240 POTEAQ6S8J7 498 aa29.04■■■□□ 2.24
PPP4R1-221ENST00000582240 SLC12A5Q9H2X9 1139 aa29.04■■■□□ 2.24
PPP4R1-221ENST00000582240 ARHGEF10O15013 1369 aa29.03■■■□□ 2.24
PPP4R1-221ENST00000582240 HSPA5P11021 654 aaKnown RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms