RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 QTRT2Q9H974 415 aaKnown RBP19.43■□□□□ 0.7
CSNK1D-220ENST00000581737 NHSL1Q5SYE7 1610 aa19.43■□□□□ 0.7
CSNK1D-220ENST00000581737 PNPLA6Q8IY17 1366 aa19.43■□□□□ 0.7
CSNK1D-220ENST00000581737 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
CSNK1D-220ENST00000581737 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
CSNK1D-220ENST00000581737 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-220ENST00000581737 RBM6P78332 1123 aaKnown RBP19.39■□□□□ 0.69
CSNK1D-220ENST00000581737 LAMC1P11047 1609 aa19.39■□□□□ 0.69
CSNK1D-220ENST00000581737 ADAMTS2O95450 1211 aa19.38■□□□□ 0.69
CSNK1D-220ENST00000581737 DCAF11Q8TEB1 546 aa19.38■□□□□ 0.69
CSNK1D-220ENST00000581737 NRXN1Q9ULB1 1477 aa19.38■□□□□ 0.69
CSNK1D-220ENST00000581737 PIK3C2GO75747 1445 aa19.37■□□□□ 0.69
CSNK1D-220ENST00000581737 ADGRL3Q9HAR2 1447 aa19.37■□□□□ 0.69
CSNK1D-220ENST00000581737 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
CSNK1D-220ENST00000581737 ADGRF5Q8IZF2 1346 aa19.36■□□□□ 0.69
CSNK1D-220ENST00000581737 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
CSNK1D-220ENST00000581737 NGLY1Q96IV0 654 aa19.34■□□□□ 0.69
CSNK1D-220ENST00000581737 C1orf167Q5SNV9 1468 aa19.34■□□□□ 0.69
CSNK1D-220ENST00000581737 EP400Q96L91 3159 aa19.34■□□□□ 0.69
CSNK1D-220ENST00000581737 L3MBTL2Q969R5 705 aa19.33■□□□□ 0.68
CSNK1D-220ENST00000581737 ORAI2Q96SN7 254 aa19.33■□□□□ 0.68
CSNK1D-220ENST00000581737 KDM2AQ9Y2K7 1162 aa19.33■□□□□ 0.68
CSNK1D-220ENST00000581737 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
CSNK1D-220ENST00000581737 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
CSNK1D-220ENST00000581737 SOS2Q07890 1332 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-220ENST00000581737 PRAG1Q86YV5 1406 aa19.29■□□□□ 0.68
CSNK1D-220ENST00000581737 USP21Q9UK80 565 aa19.29■□□□□ 0.68
CSNK1D-220ENST00000581737 TIMELESSQ9UNS1 1208 aa19.29■□□□□ 0.68
CSNK1D-220ENST00000581737 C14orf93Q9H972 538 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-220ENST00000581737 FNBP4Q8N3X1 1017 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-220ENST00000581737 ATAD2Q6PL18 1390 aa19.26■□□□□ 0.67
CSNK1D-220ENST00000581737 ATRNO75882 1429 aa19.24■□□□□ 0.67
CSNK1D-220ENST00000581737 KNDC1Q76NI1 1749 aa19.23■□□□□ 0.67
CSNK1D-220ENST00000581737 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
CSNK1D-220ENST00000581737 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-220ENST00000581737 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
CSNK1D-220ENST00000581737 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
CSNK1D-220ENST00000581737 LRPPRCP42704 1394 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-220ENST00000581737 ADGRB1O14514 1584 aa19.21■□□□□ 0.67
CSNK1D-220ENST00000581737 BCL9LQ86UU0 1499 aa19.21■□□□□ 0.67
CSNK1D-220ENST00000581737 YTHDC2Q9H6S0 1430 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-220ENST00000581737 TECPR2O15040 1411 aa19.19■□□□□ 0.66
CSNK1D-220ENST00000581737 XPCQ01831 940 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-220ENST00000581737 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-220ENST00000581737 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
CSNK1D-220ENST00000581737 TMEM132EQ6IEE7 984 aa19.17■□□□□ 0.66
CSNK1D-220ENST00000581737 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
CSNK1D-220ENST00000581737 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
CSNK1D-220ENST00000581737 ZRANB1Q9UGI0 708 aa19.16■□□□□ 0.66
CSNK1D-220ENST00000581737 PXDNQ92626 1479 aa19.16■□□□□ 0.66
CSNK1D-220ENST00000581737 ESCO1Q5FWF5 840 aa19.15■□□□□ 0.66
CSNK1D-220ENST00000581737 STK26Q9P289 416 aa19.14■□□□□ 0.65
CSNK1D-220ENST00000581737 ROCK2O75116 1388 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-220ENST00000581737 FOXO3O43524 673 aa19.13■□□□□ 0.65
CSNK1D-220ENST00000581737 NUTM2FA1L443 756 aa19.12■□□□□ 0.65
CSNK1D-220ENST00000581737 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
CSNK1D-220ENST00000581737 SIRT1Q96EB6 747 aa19.12■□□□□ 0.65
CSNK1D-220ENST00000581737 GJD4Q96KN9 370 aaPredicted RBP19.12■□□□□ 0.65
CSNK1D-220ENST00000581737 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
CSNK1D-220ENST00000581737 ARHGEF28Q8N1W1 1705 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-220ENST00000581737 NPHP3Q7Z494 1330 aa19.1■□□□□ 0.65
CSNK1D-220ENST00000581737 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
CSNK1D-220ENST00000581737 WAPLQ7Z5K2 1190 aa19.09■□□□□ 0.65
CSNK1D-220ENST00000581737 CCDC125Q86Z20 511 aa19.08■□□□□ 0.64
CSNK1D-220ENST00000581737 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.64
CSNK1D-220ENST00000581737 EIF3AQ14152 1382 aaKnown RBP19.07■□□□□ 0.64
CSNK1D-220ENST00000581737 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
CSNK1D-220ENST00000581737 GLI3P10071 1580 aa19.07■□□□□ 0.64
CSNK1D-220ENST00000581737 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
CSNK1D-220ENST00000581737 DEFB132Q7Z7B7 95 aa19.07■□□□□ 0.64
CSNK1D-220ENST00000581737 POGKQ9P215 609 aa19.07■□□□□ 0.64
CSNK1D-220ENST00000581737 SLIT2O94813 1529 aa19.05■□□□□ 0.64
CSNK1D-220ENST00000581737 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
CSNK1D-220ENST00000581737 PRAM1Q96QH2 718 aa19.05■□□□□ 0.64
CSNK1D-220ENST00000581737 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
CSNK1D-220ENST00000581737 MARF1Q9Y4F3 1742 aaKnown RBP19.03■□□□□ 0.64
CSNK1D-220ENST00000581737 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
CSNK1D-220ENST00000581737 BLMP54132 1417 aaPredicted RBP19.02■□□□□ 0.64
CSNK1D-220ENST00000581737 ADGRB2O60241 1585 aa19.02■□□□□ 0.63
CSNK1D-220ENST00000581737 QRICH2Q9H0J4 1663 aa19.01■□□□□ 0.63
CSNK1D-220ENST00000581737 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
CSNK1D-220ENST00000581737 CABLES1Q8TDN4 633 aa19■□□□□ 0.63
CSNK1D-220ENST00000581737 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
CSNK1D-220ENST00000581737 SEPT12Q8IYM1 358 aa18.99■□□□□ 0.63
CSNK1D-220ENST00000581737 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-220ENST00000581737 SAFB2Q14151 953 aaKnown RBP eCLIP18.98■□□□□ 0.63
CSNK1D-220ENST00000581737 KRT28Q7Z3Y7 464 aa18.97■□□□□ 0.63
CSNK1D-220ENST00000581737 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
CSNK1D-220ENST00000581737 FMN2Q9NZ56 1722 aa18.96■□□□□ 0.63
CSNK1D-220ENST00000581737 BRWD3Q6RI45 1802 aa18.95■□□□□ 0.62
CSNK1D-220ENST00000581737 USP47Q96K76 1375 aa18.95■□□□□ 0.62
CSNK1D-220ENST00000581737 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-220ENST00000581737 SBNO2Q9Y2G9 1366 aa18.94■□□□□ 0.62
CSNK1D-220ENST00000581737 VPS72Q15906 364 aa18.94■□□□□ 0.62
CSNK1D-220ENST00000581737 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-220ENST00000581737 PSDA5PKW4 1024 aaPredicted RBP18.92■□□□□ 0.62
CSNK1D-220ENST00000581737 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
CSNK1D-220ENST00000581737 TNS3Q68CZ2 1445 aa18.91■□□□□ 0.62
CSNK1D-220ENST00000581737 ZNF316A6NFI3 1004 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-220ENST00000581737 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms