RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-220ENST00000581160 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
CDK5RAP3-220ENST00000581160 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-220ENST00000581160 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
CDK5RAP3-220ENST00000581160 EVC2Q86UK5 1308 aa12.78□□□□□ -0.36
CDK5RAP3-220ENST00000581160 STRCP1A6NGW2 1772 aa12.78□□□□□ -0.36
CDK5RAP3-220ENST00000581160 WASLO00401 505 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-220ENST00000581160 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.37
CDK5RAP3-220ENST00000581160 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-220ENST00000581160 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
CDK5RAP3-220ENST00000581160 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-220ENST00000581160 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
CDK5RAP3-220ENST00000581160 C19orf44Q9H6X5 657 aa12.75□□□□□ -0.37
CDK5RAP3-220ENST00000581160 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
CDK5RAP3-220ENST00000581160 LRRC7Q96NW7 1537 aa12.74□□□□□ -0.37
CDK5RAP3-220ENST00000581160 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
CDK5RAP3-220ENST00000581160 KIF7Q2M1P5 1343 aa12.74□□□□□ -0.37
CDK5RAP3-220ENST00000581160 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
CDK5RAP3-220ENST00000581160 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
CDK5RAP3-220ENST00000581160 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
CDK5RAP3-220ENST00000581160 ADGRL3Q9HAR2 1447 aa12.72□□□□□ -0.37
CDK5RAP3-220ENST00000581160 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-220ENST00000581160 LTBP4Q8N2S1 1624 aa12.72□□□□□ -0.37
CDK5RAP3-220ENST00000581160 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
CDK5RAP3-220ENST00000581160 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.37
CDK5RAP3-220ENST00000581160 ADGRB2O60241 1585 aa12.71□□□□□ -0.37
CDK5RAP3-220ENST00000581160 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-220ENST00000581160 ATF3P18847 181 aa12.69□□□□□ -0.38
CDK5RAP3-220ENST00000581160 CCDC61Q9Y6R9 512 aa12.69□□□□□ -0.38
CDK5RAP3-220ENST00000581160 MSH6P52701 1360 aa12.69□□□□□ -0.38
CDK5RAP3-220ENST00000581160 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
CDK5RAP3-220ENST00000581160 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-220ENST00000581160 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
CDK5RAP3-220ENST00000581160 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
CDK5RAP3-220ENST00000581160 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
CDK5RAP3-220ENST00000581160 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-220ENST00000581160 DCCP43146 1447 aa12.67□□□□□ -0.38
CDK5RAP3-220ENST00000581160 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
CDK5RAP3-220ENST00000581160 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
CDK5RAP3-220ENST00000581160 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
CDK5RAP3-220ENST00000581160 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
CDK5RAP3-220ENST00000581160 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
CDK5RAP3-220ENST00000581160 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
CDK5RAP3-220ENST00000581160 CABP1Q9NZU7 370 aa12.66□□□□□ -0.38
CDK5RAP3-220ENST00000581160 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.38
CDK5RAP3-220ENST00000581160 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
CDK5RAP3-220ENST00000581160 PANK3Q9H999 370 aa12.64□□□□□ -0.39
CDK5RAP3-220ENST00000581160 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
CDK5RAP3-220ENST00000581160 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-220ENST00000581160 ATP7BP35670 1465 aa12.63□□□□□ -0.39
CDK5RAP3-220ENST00000581160 MST1RQ04912 1400 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 C1orf167Q5SNV9 1468 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
CDK5RAP3-220ENST00000581160 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
CDK5RAP3-220ENST00000581160 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-220ENST00000581160 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-220ENST00000581160 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
CDK5RAP3-220ENST00000581160 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-220ENST00000581160 ACEP12821 1306 aa12.61□□□□□ -0.39
CDK5RAP3-220ENST00000581160 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
CDK5RAP3-220ENST00000581160 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-220ENST00000581160 PMFBP1Q8TBY8 1022 aa12.6□□□□□ -0.39
CDK5RAP3-220ENST00000581160 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
CDK5RAP3-220ENST00000581160 MYOM1P52179 1685 aa12.59□□□□□ -0.39
CDK5RAP3-220ENST00000581160 TOM1O60784 492 aa12.59□□□□□ -0.39
CDK5RAP3-220ENST00000581160 CPSF1Q10570 1443 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-220ENST00000581160 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
CDK5RAP3-220ENST00000581160 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-220ENST00000581160 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
CDK5RAP3-220ENST00000581160 ITSN1Q15811 1721 aa12.58□□□□□ -0.4
CDK5RAP3-220ENST00000581160 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
CDK5RAP3-220ENST00000581160 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
CDK5RAP3-220ENST00000581160 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
CDK5RAP3-220ENST00000581160 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-220ENST00000581160 FOXO3O43524 673 aa12.56□□□□□ -0.4
CDK5RAP3-220ENST00000581160 PSME1Q06323 249 aa12.56□□□□□ -0.4
CDK5RAP3-220ENST00000581160 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-220ENST00000581160 BRD4O60885 1362 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-220ENST00000581160 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
CDK5RAP3-220ENST00000581160 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
CDK5RAP3-220ENST00000581160 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
CDK5RAP3-220ENST00000581160 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
CDK5RAP3-220ENST00000581160 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 USP6P35125 1406 aa12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 EDC4Q6P2E9 1401 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
CDK5RAP3-220ENST00000581160 FYB1O15117 783 aa12.52□□□□□ -0.41
CDK5RAP3-220ENST00000581160 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
CDK5RAP3-220ENST00000581160 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
CDK5RAP3-220ENST00000581160 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
CDK5RAP3-220ENST00000581160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK5RAP3-220ENST00000581160 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms