RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 NRXN1Q9ULB1 1477 aa10.4□□□□□ -0.74
SENP3-205ENST00000581010 PIK3C2GO75747 1445 aa10.4□□□□□ -0.75
SENP3-205ENST00000581010 CHD2O14647 1828 aaKnown RBP10.4□□□□□ -0.75
SENP3-205ENST00000581010 NBPF1Q3BBV0 1214 aa10.39□□□□□ -0.75
SENP3-205ENST00000581010 SLC26A8Q96RN1 970 aa10.39□□□□□ -0.75
SENP3-205ENST00000581010 POLR3GLQ9BT43 218 aa10.39□□□□□ -0.75
SENP3-205ENST00000581010 EID1Q9Y6B2 187 aa10.39□□□□□ -0.75
SENP3-205ENST00000581010 ZFYVE9O95405 1425 aa10.39□□□□□ -0.75
SENP3-205ENST00000581010 GPRASP1Q5JY77 1395 aa10.39□□□□□ -0.75
SENP3-205ENST00000581010 RBM6P78332 1123 aaKnown RBP10.38□□□□□ -0.75
SENP3-205ENST00000581010 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
SENP3-205ENST00000581010 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.38□□□□□ -0.75
SENP3-205ENST00000581010 EP400Q96L91 3159 aa10.38□□□□□ -0.75
SENP3-205ENST00000581010 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
SENP3-205ENST00000581010 TMEM2Q9UHN6 1383 aa10.37□□□□□ -0.75
SENP3-205ENST00000581010 ST20-MTHFSA0A0A6YYL1 179 aa10.35□□□□□ -0.75
SENP3-205ENST00000581010 C8orf37Q96NL8 207 aa10.35□□□□□ -0.75
SENP3-205ENST00000581010 C14orf93Q9H972 538 aaKnown RBP10.35□□□□□ -0.75
SENP3-205ENST00000581010 QRICH2Q9H0J4 1663 aa10.34□□□□□ -0.75
SENP3-205ENST00000581010 DDX10Q13206 875 aaKnown RBP10.34□□□□□ -0.75
SENP3-205ENST00000581010 SLC24A1O60721 1099 aa10.33□□□□□ -0.76
SENP3-205ENST00000581010 TMF1P82094 1093 aa10.33□□□□□ -0.76
SENP3-205ENST00000581010 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
SENP3-205ENST00000581010 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
SENP3-205ENST00000581010 CCDC7Q96M83 1385 aa10.32□□□□□ -0.76
SENP3-205ENST00000581010 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
SENP3-205ENST00000581010 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
SENP3-205ENST00000581010 TRAK1Q9UPV9 953 aa10.32□□□□□ -0.76
SENP3-205ENST00000581010 ADGRB1O14514 1584 aa10.31□□□□□ -0.76
SENP3-205ENST00000581010 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
SENP3-205ENST00000581010 C14orf37Q86TY3 774 aa10.31□□□□□ -0.76
SENP3-205ENST00000581010 STK26Q9P289 416 aa10.31□□□□□ -0.76
SENP3-205ENST00000581010 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
SENP3-205ENST00000581010 WASHC2AQ641Q2 1341 aa10.31□□□□□ -0.76
SENP3-205ENST00000581010 CENPJQ9HC77 1338 aaPredicted RBP10.31□□□□□ -0.76
SENP3-205ENST00000581010 NRXN3Q9Y4C0 1643 aa10.3□□□□□ -0.76
SENP3-205ENST00000581010 NGLY1Q96IV0 654 aa10.3□□□□□ -0.76
SENP3-205ENST00000581010 POGKQ9P215 609 aa10.3□□□□□ -0.76
SENP3-205ENST00000581010 YTHDC2Q9H6S0 1430 aaKnown RBP10.29□□□□□ -0.76
SENP3-205ENST00000581010 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
SENP3-205ENST00000581010 KNDC1Q76NI1 1749 aa10.28□□□□□ -0.76
SENP3-205ENST00000581010 BRINP3Q76B58 766 aa10.28□□□□□ -0.76
SENP3-205ENST00000581010 ANP32CO43423 234 aa10.27□□□□□ -0.77
SENP3-205ENST00000581010 ADAMTS2O95450 1211 aa10.27□□□□□ -0.77
SENP3-205ENST00000581010 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.77
SENP3-205ENST00000581010 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
SENP3-205ENST00000581010 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
SENP3-205ENST00000581010 ATF3P18847 181 aa10.26□□□□□ -0.77
SENP3-205ENST00000581010 SAFB2Q14151 953 aaKnown RBP eCLIP10.26□□□□□ -0.77
SENP3-205ENST00000581010 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
SENP3-205ENST00000581010 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
SENP3-205ENST00000581010 DLC1Q96QB1 1528 aa10.26□□□□□ -0.77
SENP3-205ENST00000581010 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
SENP3-205ENST00000581010 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
SENP3-205ENST00000581010 CCDC125Q86Z20 511 aa10.25□□□□□ -0.77
SENP3-205ENST00000581010 TESK2Q96S53 571 aa10.25□□□□□ -0.77
SENP3-205ENST00000581010 EVC2Q86UK5 1308 aa10.25□□□□□ -0.77
SENP3-205ENST00000581010 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
SENP3-205ENST00000581010 YY1P25490 414 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 DDX17Q92841 729 aaKnown RBP10.24□□□□□ -0.77
SENP3-205ENST00000581010 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 USP21Q9UK80 565 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 METP08581 1390 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 ATRNO75882 1429 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 ADAMTS13Q76LX8 1427 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 NCOA3Q9Y6Q9 1424 aa10.24□□□□□ -0.77
SENP3-205ENST00000581010 TRPC5Q9UL62 973 aaPredicted RBP10.23□□□□□ -0.77
SENP3-205ENST00000581010 MARF1Q9Y4F3 1742 aaKnown RBP10.23□□□□□ -0.77
SENP3-205ENST00000581010 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
SENP3-205ENST00000581010 BLMP54132 1417 aaPredicted RBP10.23□□□□□ -0.77
SENP3-205ENST00000581010 SRPK2P78362 688 aaKnown RBP10.22□□□□□ -0.77
SENP3-205ENST00000581010 MIER1Q8N108 512 aa10.22□□□□□ -0.77
SENP3-205ENST00000581010 LRRC59Q96AG4 307 aaKnown RBP10.22□□□□□ -0.77
SENP3-205ENST00000581010 C19orf44Q9H6X5 657 aa10.22□□□□□ -0.77
SENP3-205ENST00000581010 TBX22Q9Y458 520 aa10.22□□□□□ -0.77
SENP3-205ENST00000581010 ABCC11Q96J66 1382 aa10.22□□□□□ -0.77
SENP3-205ENST00000581010 TMC1Q8TDI8 760 aa10.21□□□□□ -0.77
SENP3-205ENST00000581010 BCL9LQ86UU0 1499 aa10.21□□□□□ -0.78
SENP3-205ENST00000581010 MYOM1P52179 1685 aa10.21□□□□□ -0.78
SENP3-205ENST00000581010 TECPR2O15040 1411 aa10.2□□□□□ -0.78
SENP3-205ENST00000581010 MST1RQ04912 1400 aa10.2□□□□□ -0.78
SENP3-205ENST00000581010 CNGB1Q14028 1251 aaPredicted RBP10.2□□□□□ -0.78
SENP3-205ENST00000581010 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
SENP3-205ENST00000581010 XRN1Q8IZH2 1706 aaKnown RBP10.19□□□□□ -0.78
SENP3-205ENST00000581010 TULP4Q9NRJ4 1543 aa10.19□□□□□ -0.78
SENP3-205ENST00000581010 AMOTL2Q9Y2J4 779 aa10.19□□□□□ -0.78
SENP3-205ENST00000581010 WAPLQ7Z5K2 1190 aa10.18□□□□□ -0.78
SENP3-205ENST00000581010 GLI3P10071 1580 aa10.18□□□□□ -0.78
SENP3-205ENST00000581010 PTCH1Q13635 1447 aa10.17□□□□□ -0.78
SENP3-205ENST00000581010 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
SENP3-205ENST00000581010 CABP2Q9NPB3 220 aa10.17□□□□□ -0.78
SENP3-205ENST00000581010 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
SENP3-205ENST00000581010 DCCP43146 1447 aa10.16□□□□□ -0.78
SENP3-205ENST00000581010 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
SENP3-205ENST00000581010 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
SENP3-205ENST00000581010 KTN1Q86UP2 1357 aaKnown RBP10.16□□□□□ -0.78
SENP3-205ENST00000581010 ROBO2Q9HCK4 1378 aa10.16□□□□□ -0.78
SENP3-205ENST00000581010 PLEKHH1Q9ULM0 1364 aa10.16□□□□□ -0.78
SENP3-205ENST00000581010 NINLQ9Y2I6 1382 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms