RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	TRIM52	Q96A61	297 aa		13.49	□□□□□ -0.25
NUP85-208	ENST00000578830	NALCN	Q8IZF0	1738 aa		13.48	□□□□□ -0.25
NUP85-208	ENST00000578830	RXRB	P28702	533 aa		13.48	□□□□□ -0.25
NUP85-208	ENST00000578830	SETD5	Q9C0A6	1442 aa		13.47	□□□□□ -0.25
NUP85-208	ENST00000578830	MST1R	Q04912	1400 aa		13.47	□□□□□ -0.25
NUP85-208	ENST00000578830	NUP155	O75694	1391 aa		13.45	□□□□□ -0.26
NUP85-208	ENST00000578830	EP400	Q96L91	3159 aa		13.45	□□□□□ -0.26
NUP85-208	ENST00000578830	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.45	□□□□□ -0.26
NUP85-208	ENST00000578830	NUTM2E	B1AL46	878 aa	Predicted RBP	13.45	□□□□□ -0.26
NUP85-208	ENST00000578830	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.45	□□□□□ -0.26
NUP85-208	ENST00000578830	LAMC1	P11047	1609 aa		13.45	□□□□□ -0.26
NUP85-208	ENST00000578830	AFF2	P51816	1311 aa		13.44	□□□□□ -0.26
NUP85-208	ENST00000578830	ZNF692	Q9BU19	519 aa	Predicted RBP	13.44	□□□□□ -0.26
NUP85-208	ENST00000578830	LRRC59	Q96AG4	307 aa	Known RBP	13.43	□□□□□ -0.26
NUP85-208	ENST00000578830	ADGRL3	Q9HAR2	1447 aa		13.42	□□□□□ -0.26
NUP85-208	ENST00000578830	NEXMIF	Q5QGS0	1516 aa		13.42	□□□□□ -0.26
NUP85-208	ENST00000578830	CLTCL1	P53675	1640 aa		13.42	□□□□□ -0.26
NUP85-208	ENST00000578830	PITPNM1	O00562	1244 aa		13.41	□□□□□ -0.26
NUP85-208	ENST00000578830	MET	P08581	1390 aa		13.41	□□□□□ -0.26
NUP85-208	ENST00000578830	MARF1	Q9Y4F3	1742 aa	Known RBP	13.4	□□□□□ -0.26
NUP85-208	ENST00000578830	PNPLA6	Q8IY17	1366 aa		13.4	□□□□□ -0.26
NUP85-208	ENST00000578830	RGS12	O14924	1447 aa		13.39	□□□□□ -0.27
NUP85-208	ENST00000578830	ZNF326	Q5BKZ1	582 aa	Known RBP	13.39	□□□□□ -0.27
NUP85-208	ENST00000578830	SSUH2	Q9Y2M2	353 aa		13.39	□□□□□ -0.27
NUP85-208	ENST00000578830	RBM6	P78332	1123 aa	Known RBP	13.38	□□□□□ -0.27
NUP85-208	ENST00000578830	C8orf37	Q96NL8	207 aa		13.38	□□□□□ -0.27
NUP85-208	ENST00000578830	QTRT2	Q9H974	415 aa	Known RBP	13.38	□□□□□ -0.27
NUP85-208	ENST00000578830	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.37	□□□□□ -0.27
NUP85-208	ENST00000578830	PPL	O60437	1756 aa		13.37	□□□□□ -0.27
NUP85-208	ENST00000578830	C1orf167	Q5SNV9	1468 aa		13.36	□□□□□ -0.27
NUP85-208	ENST00000578830	DDX17	Q92841	729 aa	Known RBP	13.36	□□□□□ -0.27
NUP85-208	ENST00000578830	ITGAE	P38570	1179 aa		13.35	□□□□□ -0.27
NUP85-208	ENST00000578830	PTCH1	Q13635	1447 aa		13.35	□□□□□ -0.27
NUP85-208	ENST00000578830	PRAG1	Q86YV5	1406 aa		13.33	□□□□□ -0.28
NUP85-208	ENST00000578830	NGLY1	Q96IV0	654 aa		13.33	□□□□□ -0.28
NUP85-208	ENST00000578830	ADAMTS2	O95450	1211 aa		13.32	□□□□□ -0.28
NUP85-208	ENST00000578830	SOS2	Q07890	1332 aa	Predicted RBP	13.32	□□□□□ -0.28
NUP85-208	ENST00000578830	ATAD2	Q6PL18	1390 aa		13.32	□□□□□ -0.28
NUP85-208	ENST00000578830	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.3	□□□□□ -0.28
NUP85-208	ENST00000578830	ROBO2	Q9HCK4	1378 aa		13.3	□□□□□ -0.28
NUP85-208	ENST00000578830	VGF	O15240	615 aa	Predicted RBP	13.29	□□□□□ -0.28
NUP85-208	ENST00000578830	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.29	□□□□□ -0.28
NUP85-208	ENST00000578830	ORAI2	Q96SN7	254 aa		13.29	□□□□□ -0.28
NUP85-208	ENST00000578830	USP21	Q9UK80	565 aa		13.29	□□□□□ -0.28
NUP85-208	ENST00000578830	TRPC5	Q9UL62	973 aa	Predicted RBP	13.29	□□□□□ -0.28
NUP85-208	ENST00000578830	HFM1	A2PYH4	1435 aa		13.29	□□□□□ -0.28
NUP85-208	ENST00000578830	CDC42BPG	Q6DT37	1551 aa		13.28	□□□□□ -0.28
NUP85-208	ENST00000578830	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP85-208	ENST00000578830	ATRN	O75882	1429 aa		13.28	□□□□□ -0.28
NUP85-208	ENST00000578830	BRWD3	Q6RI45	1802 aa		13.27	□□□□□ -0.28
NUP85-208	ENST00000578830	PIP4P2	Q8N4L2	257 aa		13.27	□□□□□ -0.29
NUP85-208	ENST00000578830	IFT172	Q9UG01	1749 aa		13.27	□□□□□ -0.29
NUP85-208	ENST00000578830	RGPD8	O14715	1765 aa	Predicted RBP	13.26	□□□□□ -0.29
NUP85-208	ENST00000578830	MYOM2	P54296	1465 aa		13.26	□□□□□ -0.29
NUP85-208	ENST00000578830	NAIP	Q13075	1403 aa		13.26	□□□□□ -0.29
NUP85-208	ENST00000578830	RPGRIP1L	Q68CZ1	1315 aa		13.26	□□□□□ -0.29
NUP85-208	ENST00000578830	KNDC1	Q76NI1	1749 aa		13.26	□□□□□ -0.29
NUP85-208	ENST00000578830	CLEC11A	Q9Y240	323 aa		13.26	□□□□□ -0.29
NUP85-208	ENST00000578830	PXDN	Q92626	1479 aa		13.25	□□□□□ -0.29
NUP85-208	ENST00000578830	NPHP3	Q7Z494	1330 aa		13.24	□□□□□ -0.29
NUP85-208	ENST00000578830	BCL9L	Q86UU0	1499 aa		13.23	□□□□□ -0.29
NUP85-208	ENST00000578830	FMN2	Q9NZ56	1722 aa		13.23	□□□□□ -0.29
NUP85-208	ENST00000578830	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.23	□□□□□ -0.29
NUP85-208	ENST00000578830	KIF1A	Q12756	1690 aa		13.23	□□□□□ -0.29
NUP85-208	ENST00000578830	RRBP1	Q9P2E9	1410 aa	Known RBP	13.22	□□□□□ -0.29
NUP85-208	ENST00000578830	CCDC125	Q86Z20	511 aa		13.22	□□□□□ -0.29
NUP85-208	ENST00000578830	ZRANB1	Q9UGI0	708 aa		13.22	□□□□□ -0.29
NUP85-208	ENST00000578830	ESCO1	Q5FWF5	840 aa		13.21	□□□□□ -0.29
NUP85-208	ENST00000578830	NWD2	Q9ULI1	1742 aa		13.2	□□□□□ -0.3
NUP85-208	ENST00000578830	FXR2	P51116	673 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
NUP85-208	ENST00000578830	GLI3	P10071	1580 aa		13.2	□□□□□ -0.3
NUP85-208	ENST00000578830	LRPPRC	P42704	1394 aa	Known RBP	13.2	□□□□□ -0.3
NUP85-208	ENST00000578830	USP32	Q8NFA0	1604 aa		13.19	□□□□□ -0.3
NUP85-208	ENST00000578830	TECPR2	O15040	1411 aa		13.19	□□□□□ -0.3
NUP85-208	ENST00000578830	PLCH1	Q4KWH8	1693 aa		13.18	□□□□□ -0.3
NUP85-208	ENST00000578830	FOXO3	O43524	673 aa		13.18	□□□□□ -0.3
NUP85-208	ENST00000578830	GJD4	Q96KN9	370 aa	Predicted RBP	13.18	□□□□□ -0.3
NUP85-208	ENST00000578830	ABCA3	Q99758	1704 aa		13.18	□□□□□ -0.3
NUP85-208	ENST00000578830	SPDYE4	A6NLX3	237 aa		13.17	□□□□□ -0.3
NUP85-208	ENST00000578830	SLIT2	O94813	1529 aa		13.17	□□□□□ -0.3
NUP85-208	ENST00000578830	XPC	Q01831	940 aa	Predicted RBP	13.16	□□□□□ -0.3
NUP85-208	ENST00000578830	RALGAPB	Q86X10	1494 aa		13.16	□□□□□ -0.3
NUP85-208	ENST00000578830	UNC5CL	Q8IV45	518 aa		13.15	□□□□□ -0.3
NUP85-208	ENST00000578830	SPATA31A3	Q5VYP0	1347 aa		13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	ADGRF5	Q8IZF2	1346 aa		13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	CCDC144A	A2RUR9	1427 aa		13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	BLM	P54132	1417 aa	Predicted RBP	13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	WAPL	Q7Z5K2	1190 aa		13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	ABCC11	Q96J66	1382 aa		13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	ANKRD30B	Q9BXX2	1392 aa		13.14	□□□□□ -0.31
NUP85-208	ENST00000578830	SPATA31E1	Q6ZUB1	1445 aa		13.13	□□□□□ -0.31
NUP85-208	ENST00000578830	NUTM2F	A1L443	756 aa		13.13	□□□□□ -0.31
NUP85-208	ENST00000578830	STK26	Q9P289	416 aa		13.13	□□□□□ -0.31
NUP85-208	ENST00000578830	LRP5	O75197	1615 aa		13.13	□□□□□ -0.31
NUP85-208	ENST00000578830	PIK3C2G	O75747	1445 aa		13.12	□□□□□ -0.31
NUP85-208	ENST00000578830	PLEKHH1	Q9ULM0	1364 aa		13.11	□□□□□ -0.31
NUP85-208	ENST00000578830	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.11	□□□□□ -0.31
NUP85-208	ENST00000578830	NRAP	Q86VF7	1730 aa		13.1	□□□□□ -0.31
NUP85-208	ENST00000578830	RGL3	Q3MIN7	710 aa		13.1	□□□□□ -0.31
NUP85-208	ENST00000578830	KRT28	Q7Z3Y7	464 aa		13.1	□□□□□ -0.31

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