RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
PPP4R1-208ENST00000578178 WAPLQ7Z5K2 1190 aa15.92■□□□□ 0.14
PPP4R1-208ENST00000578178 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
PPP4R1-208ENST00000578178 ILDR2Q71H61 639 aa15.91■□□□□ 0.14
PPP4R1-208ENST00000578178 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
PPP4R1-208ENST00000578178 KIAA1210Q9ULL0 1709 aa15.91■□□□□ 0.14
PPP4R1-208ENST00000578178 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
PPP4R1-208ENST00000578178 ADGRB2O60241 1585 aa15.89■□□□□ 0.13
PPP4R1-208ENST00000578178 SPATA31A6Q5VVP1 1343 aa15.88■□□□□ 0.13
PPP4R1-208ENST00000578178 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
PPP4R1-208ENST00000578178 KIF1AQ12756 1690 aa15.87■□□□□ 0.13
PPP4R1-208ENST00000578178 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
PPP4R1-208ENST00000578178 LRP6O75581 1613 aa15.86■□□□□ 0.13
PPP4R1-208ENST00000578178 PRAM1Q96QH2 718 aa15.86■□□□□ 0.13
PPP4R1-208ENST00000578178 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
PPP4R1-208ENST00000578178 DDX17Q92841 729 aaKnown RBP15.85■□□□□ 0.13
PPP4R1-208ENST00000578178 SAFB2Q14151 953 aaKnown RBP eCLIP15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 POGKQ9P215 609 aa15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 TRAK1Q9UPV9 953 aa15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 SOS2Q07890 1332 aaPredicted RBP15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
PPP4R1-208ENST00000578178 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
PPP4R1-208ENST00000578178 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
PPP4R1-208ENST00000578178 NPHP3Q7Z494 1330 aa15.82■□□□□ 0.12
PPP4R1-208ENST00000578178 PXDNQ92626 1479 aa15.82■□□□□ 0.12
PPP4R1-208ENST00000578178 ANKARQ7Z5J8 1434 aa15.81■□□□□ 0.12
PPP4R1-208ENST00000578178 USP32Q8NFA0 1604 aa15.81■□□□□ 0.12
PPP4R1-208ENST00000578178 COL22A1Q8NFW1 1626 aaPredicted RBP15.8■□□□□ 0.12
PPP4R1-208ENST00000578178 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
PPP4R1-208ENST00000578178 RGS17Q9UGC6 210 aaPredicted RBP15.8■□□□□ 0.12
PPP4R1-208ENST00000578178 EIF3AQ14152 1382 aaKnown RBP15.79■□□□□ 0.12
PPP4R1-208ENST00000578178 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
PPP4R1-208ENST00000578178 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
PPP4R1-208ENST00000578178 MEX3CQ5U5Q3 659 aaKnown RBP15.78■□□□□ 0.12
PPP4R1-208ENST00000578178 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
PPP4R1-208ENST00000578178 MINK1Q8N4C8 1332 aaPredicted RBP15.77■□□□□ 0.12
PPP4R1-208ENST00000578178 SOCS7O14512 581 aa15.77■□□□□ 0.12
PPP4R1-208ENST00000578178 NUTM2BA6NNL0 878 aaPredicted RBP15.76■□□□□ 0.11
PPP4R1-208ENST00000578178 NUTM2EB1AL46 878 aaPredicted RBP15.76■□□□□ 0.11
PPP4R1-208ENST00000578178 FOXO3O43524 673 aa15.76■□□□□ 0.11
PPP4R1-208ENST00000578178 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
PPP4R1-208ENST00000578178 NUTM2AQ8IVF1 878 aaPredicted RBP15.76■□□□□ 0.11
PPP4R1-208ENST00000578178 ITSN1Q15811 1721 aa15.76■□□□□ 0.11
PPP4R1-208ENST00000578178 HIRIP3Q9BW71 556 aaPredicted RBP15.75■□□□□ 0.11
PPP4R1-208ENST00000578178 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
PPP4R1-208ENST00000578178 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
PPP4R1-208ENST00000578178 PHF8Q9UPP1 1060 aa15.74■□□□□ 0.11
PPP4R1-208ENST00000578178 QRICH2Q9H0J4 1663 aa15.73■□□□□ 0.11
PPP4R1-208ENST00000578178 WASLO00401 505 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-208ENST00000578178 ATP7BP35670 1465 aa15.72■□□□□ 0.11
PPP4R1-208ENST00000578178 POTEAQ6S8J7 498 aa15.72■□□□□ 0.11
PPP4R1-208ENST00000578178 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
PPP4R1-208ENST00000578178 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.11
PPP4R1-208ENST00000578178 PRR36Q9H6K5 1346 aa15.71■□□□□ 0.11
PPP4R1-208ENST00000578178 TNS3Q68CZ2 1445 aa15.71■□□□□ 0.11
PPP4R1-208ENST00000578178 ZNF772Q68DY9 489 aaPredicted RBP15.7■□□□□ 0.1
PPP4R1-208ENST00000578178 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
PPP4R1-208ENST00000578178 TONSLQ96HA7 1378 aa15.7■□□□□ 0.1
PPP4R1-208ENST00000578178 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
PPP4R1-208ENST00000578178 KRT28Q7Z3Y7 464 aa15.69■□□□□ 0.1
PPP4R1-208ENST00000578178 SBNO1A3KN83 1393 aa15.69■□□□□ 0.1
PPP4R1-208ENST00000578178 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
PPP4R1-208ENST00000578178 AFF2P51816 1311 aa15.68■□□□□ 0.1
PPP4R1-208ENST00000578178 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
PPP4R1-208ENST00000578178 ABCA3Q99758 1704 aa15.68■□□□□ 0.1
PPP4R1-208ENST00000578178 C8orf37Q96NL8 207 aa15.68■□□□□ 0.1
PPP4R1-208ENST00000578178 ADAMTS2O95450 1211 aa15.67■□□□□ 0.1
PPP4R1-208ENST00000578178 PSME1Q06323 249 aa15.67■□□□□ 0.1
PPP4R1-208ENST00000578178 PMFBP1Q8TBY8 1022 aa15.67■□□□□ 0.1
PPP4R1-208ENST00000578178 RALGAPBQ86X10 1494 aa15.66■□□□□ 0.1
PPP4R1-208ENST00000578178 GPRASP1Q5JY77 1395 aa15.66■□□□□ 0.1
PPP4R1-208ENST00000578178 ALS2Q96Q42 1657 aa15.66■□□□□ 0.1
PPP4R1-208ENST00000578178 ARHGEF10O15013 1369 aa15.65■□□□□ 0.1
PPP4R1-208ENST00000578178 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
PPP4R1-208ENST00000578178 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
PPP4R1-208ENST00000578178 CDK19Q9BWU1 502 aa15.64■□□□□ 0.09
PPP4R1-208ENST00000578178 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
PPP4R1-208ENST00000578178 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-208ENST00000578178 CDK12Q9NYV4 1490 aaPredicted RBP15.62■□□□□ 0.09
PPP4R1-208ENST00000578178 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-208ENST00000578178 CRYBG1Q9Y4K1 1723 aa15.61■□□□□ 0.09
PPP4R1-208ENST00000578178 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
PPP4R1-208ENST00000578178 LMOD2Q6P5Q4 547 aa15.6■□□□□ 0.09
PPP4R1-208ENST00000578178 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
PPP4R1-208ENST00000578178 CCDC61Q9Y6R9 512 aa15.6■□□□□ 0.09
PPP4R1-208ENST00000578178 RXRBP28702 533 aa15.59■□□□□ 0.09
PPP4R1-208ENST00000578178 SRPK2P78362 688 aaKnown RBP15.59■□□□□ 0.09
PPP4R1-208ENST00000578178 USP21Q9UK80 565 aa15.59■□□□□ 0.09
PPP4R1-208ENST00000578178 PLCH1Q4KWH8 1693 aa15.59■□□□□ 0.09
PPP4R1-208ENST00000578178 PPIP5K1Q6PFW1 1433 aa15.59■□□□□ 0.09
PPP4R1-208ENST00000578178 HAP1P54257 671 aaPredicted RBP15.58■□□□□ 0.08
PPP4R1-208ENST00000578178 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
PPP4R1-208ENST00000578178 ATRNO75882 1429 aa15.58■□□□□ 0.08
PPP4R1-208ENST00000578178 SLIT2O94813 1529 aa15.58■□□□□ 0.08
PPP4R1-208ENST00000578178 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
PPP4R1-208ENST00000578178 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
PPP4R1-208ENST00000578178 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
PPP4R1-208ENST00000578178 CABP2Q9NPB3 220 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms