RNA–Protein interactions for RNA: ENST00000577645.5

NUP85-206, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-206ENST00000577645 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
NUP85-206ENST00000577645 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
NUP85-206ENST00000577645 FMN2Q9NZ56 1722 aa14.13□□□□□ -0.15
NUP85-206ENST00000577645 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
NUP85-206ENST00000577645 MST1RQ04912 1400 aa14.13□□□□□ -0.15
NUP85-206ENST00000577645 ROBO2Q9HCK4 1378 aa14.12□□□□□ -0.15
NUP85-206ENST00000577645 MED1Q15648 1581 aaPredicted RBP14.11□□□□□ -0.15
NUP85-206ENST00000577645 SIRT1Q96EB6 747 aa14.11□□□□□ -0.15
NUP85-206ENST00000577645 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
NUP85-206ENST00000577645 SLAIN2Q9P270 581 aa14.11□□□□□ -0.15
NUP85-206ENST00000577645 ITSN1Q15811 1721 aa14.1□□□□□ -0.15
NUP85-206ENST00000577645 HSPA1LP34931 641 aa14.09□□□□□ -0.15
NUP85-206ENST00000577645 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
NUP85-206ENST00000577645 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.16
NUP85-206ENST00000577645 DCAF11Q8TEB1 546 aa14.07□□□□□ -0.16
NUP85-206ENST00000577645 C1orf167Q5SNV9 1468 aa14.06□□□□□ -0.16
NUP85-206ENST00000577645 JCADQ9P266 1359 aa14.05□□□□□ -0.16
NUP85-206ENST00000577645 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
NUP85-206ENST00000577645 ANKARQ7Z5J8 1434 aa14.04□□□□□ -0.16
NUP85-206ENST00000577645 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.17
NUP85-206ENST00000577645 BRINP3Q76B58 766 aa14.02□□□□□ -0.17
NUP85-206ENST00000577645 COL22A1Q8NFW1 1626 aaPredicted RBP14.01□□□□□ -0.17
NUP85-206ENST00000577645 SPATA31A6Q5VVP1 1343 aa14.01□□□□□ -0.17
NUP85-206ENST00000577645 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
NUP85-206ENST00000577645 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
NUP85-206ENST00000577645 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
NUP85-206ENST00000577645 RGPD8O14715 1765 aaPredicted RBP14□□□□□ -0.17
NUP85-206ENST00000577645 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
NUP85-206ENST00000577645 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
NUP85-206ENST00000577645 NPHP3Q7Z494 1330 aa13.98□□□□□ -0.17
NUP85-206ENST00000577645 STK26Q9P289 416 aa13.98□□□□□ -0.17
NUP85-206ENST00000577645 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
NUP85-206ENST00000577645 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
NUP85-206ENST00000577645 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
NUP85-206ENST00000577645 MARF1Q9Y4F3 1742 aaKnown RBP13.97□□□□□ -0.17
NUP85-206ENST00000577645 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.17
NUP85-206ENST00000577645 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
NUP85-206ENST00000577645 POGKQ9P215 609 aa13.96□□□□□ -0.17
NUP85-206ENST00000577645 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
NUP85-206ENST00000577645 PXDNQ92626 1479 aa13.95□□□□□ -0.18
NUP85-206ENST00000577645 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
NUP85-206ENST00000577645 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
NUP85-206ENST00000577645 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
NUP85-206ENST00000577645 GPRASP1Q5JY77 1395 aa13.94□□□□□ -0.18
NUP85-206ENST00000577645 SOS2Q07890 1332 aaPredicted RBP13.93□□□□□ -0.18
NUP85-206ENST00000577645 ZBTB22O15209 634 aa13.93□□□□□ -0.18
NUP85-206ENST00000577645 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
NUP85-206ENST00000577645 ATP7BP35670 1465 aa13.93□□□□□ -0.18
NUP85-206ENST00000577645 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
NUP85-206ENST00000577645 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
NUP85-206ENST00000577645 ROCK2O75116 1388 aaKnown RBP13.92□□□□□ -0.18
NUP85-206ENST00000577645 ABCA3Q99758 1704 aa13.91□□□□□ -0.18
NUP85-206ENST00000577645 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
NUP85-206ENST00000577645 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
NUP85-206ENST00000577645 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
NUP85-206ENST00000577645 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
NUP85-206ENST00000577645 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
NUP85-206ENST00000577645 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
NUP85-206ENST00000577645 ALS2Q96Q42 1657 aa13.89□□□□□ -0.19
NUP85-206ENST00000577645 LRP6O75581 1613 aa13.89□□□□□ -0.19
NUP85-206ENST00000577645 TNS3Q68CZ2 1445 aa13.89□□□□□ -0.19
NUP85-206ENST00000577645 CENPJQ9HC77 1338 aaPredicted RBP13.89□□□□□ -0.19
NUP85-206ENST00000577645 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
NUP85-206ENST00000577645 WASLO00401 505 aaPredicted RBP13.88□□□□□ -0.19
NUP85-206ENST00000577645 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
NUP85-206ENST00000577645 RGS17Q9UGC6 210 aaPredicted RBP13.88□□□□□ -0.19
NUP85-206ENST00000577645 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
NUP85-206ENST00000577645 NEUROD1Q13562 356 aa13.87□□□□□ -0.19
NUP85-206ENST00000577645 ORAI2Q96SN7 254 aa13.87□□□□□ -0.19
NUP85-206ENST00000577645 BRD4O60885 1362 aaPredicted RBP13.86□□□□□ -0.19
NUP85-206ENST00000577645 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
NUP85-206ENST00000577645 PSME1Q06323 249 aa13.86□□□□□ -0.19
NUP85-206ENST00000577645 PHF8Q9UPP1 1060 aa13.86□□□□□ -0.19
NUP85-206ENST00000577645 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
NUP85-206ENST00000577645 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
NUP85-206ENST00000577645 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
NUP85-206ENST00000577645 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
NUP85-206ENST00000577645 AKAP12Q02952 1782 aa13.83□□□□□ -0.19
NUP85-206ENST00000577645 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
NUP85-206ENST00000577645 ZNF772Q68DY9 489 aaPredicted RBP13.83□□□□□ -0.2
NUP85-206ENST00000577645 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.2
NUP85-206ENST00000577645 FOXO3O43524 673 aa13.82□□□□□ -0.2
NUP85-206ENST00000577645 NBPF1Q3BBV0 1214 aa13.82□□□□□ -0.2
NUP85-206ENST00000577645 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
NUP85-206ENST00000577645 PHRF1Q9P1Y6 1649 aaKnown RBP13.82□□□□□ -0.2
NUP85-206ENST00000577645 CDK12Q9NYV4 1490 aaPredicted RBP13.81□□□□□ -0.2
NUP85-206ENST00000577645 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
NUP85-206ENST00000577645 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
NUP85-206ENST00000577645 PLCH1Q4KWH8 1693 aa13.8□□□□□ -0.2
NUP85-206ENST00000577645 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
NUP85-206ENST00000577645 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
NUP85-206ENST00000577645 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
NUP85-206ENST00000577645 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
NUP85-206ENST00000577645 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
NUP85-206ENST00000577645 CARD11Q9BXL7 1154 aa13.79□□□□□ -0.2
NUP85-206ENST00000577645 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
NUP85-206ENST00000577645 NRKQ7Z2Y5 1582 aa13.79□□□□□ -0.2
NUP85-206ENST00000577645 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
NUP85-206ENST00000577645 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
NUP85-206ENST00000577645 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms