RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
CSNK1D-206ENST00000577578 STK26Q9P289 416 aa18.27■□□□□ 0.52
CSNK1D-206ENST00000577578 LRP6O75581 1613 aa18.27■□□□□ 0.51
CSNK1D-206ENST00000577578 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
CSNK1D-206ENST00000577578 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
CSNK1D-206ENST00000577578 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
CSNK1D-206ENST00000577578 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-206ENST00000577578 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
CSNK1D-206ENST00000577578 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-206ENST00000577578 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
CSNK1D-206ENST00000577578 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-206ENST00000577578 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
CSNK1D-206ENST00000577578 DDX17Q92841 729 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-206ENST00000577578 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
CSNK1D-206ENST00000577578 ADGRB2O60241 1585 aa18.18■□□□□ 0.5
CSNK1D-206ENST00000577578 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
CSNK1D-206ENST00000577578 PXDNQ92626 1479 aa18.17■□□□□ 0.5
CSNK1D-206ENST00000577578 KIF1AQ12756 1690 aa18.17■□□□□ 0.5
CSNK1D-206ENST00000577578 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
CSNK1D-206ENST00000577578 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-206ENST00000577578 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
CSNK1D-206ENST00000577578 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
CSNK1D-206ENST00000577578 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
CSNK1D-206ENST00000577578 RGPD8O14715 1765 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-206ENST00000577578 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
CSNK1D-206ENST00000577578 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-206ENST00000577578 USP32Q8NFA0 1604 aa18.12■□□□□ 0.49
CSNK1D-206ENST00000577578 MEX3CQ5U5Q3 659 aaKnown RBP18.12■□□□□ 0.49
CSNK1D-206ENST00000577578 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
CSNK1D-206ENST00000577578 FOXO3O43524 673 aa18.11■□□□□ 0.49
CSNK1D-206ENST00000577578 ZNF772Q68DY9 489 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-206ENST00000577578 ANKARQ7Z5J8 1434 aa18.11■□□□□ 0.49
CSNK1D-206ENST00000577578 NUTM2BA6NNL0 878 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-206ENST00000577578 NUTM2EB1AL46 878 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-206ENST00000577578 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-206ENST00000577578 POGKQ9P215 609 aa18.1■□□□□ 0.49
CSNK1D-206ENST00000577578 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
CSNK1D-206ENST00000577578 SAFB2Q14151 953 aaKnown RBP eCLIP18.08■□□□□ 0.48
CSNK1D-206ENST00000577578 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-206ENST00000577578 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
CSNK1D-206ENST00000577578 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-206ENST00000577578 AFF2P51816 1311 aa18.05■□□□□ 0.48
CSNK1D-206ENST00000577578 XPCQ01831 940 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-206ENST00000577578 PHF8Q9UPP1 1060 aa18.05■□□□□ 0.48
CSNK1D-206ENST00000577578 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
CSNK1D-206ENST00000577578 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-206ENST00000577578 CDK12Q9NYV4 1490 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-206ENST00000577578 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-206ENST00000577578 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
CSNK1D-206ENST00000577578 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
CSNK1D-206ENST00000577578 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-206ENST00000577578 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 KRT28Q7Z3Y7 464 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 SBNO1A3KN83 1393 aa18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-206ENST00000577578 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
CSNK1D-206ENST00000577578 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
CSNK1D-206ENST00000577578 ATP7BP35670 1465 aa18■□□□□ 0.47
CSNK1D-206ENST00000577578 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
CSNK1D-206ENST00000577578 RXRBP28702 533 aa17.98■□□□□ 0.47
CSNK1D-206ENST00000577578 PSME1Q06323 249 aa17.98■□□□□ 0.47
CSNK1D-206ENST00000577578 NGLY1Q96IV0 654 aa17.98■□□□□ 0.47
CSNK1D-206ENST00000577578 ABCA3Q99758 1704 aa17.98■□□□□ 0.47
CSNK1D-206ENST00000577578 TOPAZ1Q8N9V7 1692 aa17.97■□□□□ 0.47
CSNK1D-206ENST00000577578 ALS2Q96Q42 1657 aa17.97■□□□□ 0.47
CSNK1D-206ENST00000577578 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
CSNK1D-206ENST00000577578 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
CSNK1D-206ENST00000577578 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.95■□□□□ 0.46
CSNK1D-206ENST00000577578 ARHGEF10O15013 1369 aa17.95■□□□□ 0.46
CSNK1D-206ENST00000577578 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
CSNK1D-206ENST00000577578 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-206ENST00000577578 QTRT2Q9H974 415 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-206ENST00000577578 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
CSNK1D-206ENST00000577578 ATRNO75882 1429 aa17.93■□□□□ 0.46
CSNK1D-206ENST00000577578 USP21Q9UK80 565 aa17.93■□□□□ 0.46
CSNK1D-206ENST00000577578 SLIT2O94813 1529 aa17.93■□□□□ 0.46
CSNK1D-206ENST00000577578 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 RGS12O14924 1447 aa17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 NEUROD1Q13562 356 aa17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 NUDT16Q96DE0 195 aaKnown RBP17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 CRYBG1Q9Y4K1 1723 aa17.92■□□□□ 0.46
CSNK1D-206ENST00000577578 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-206ENST00000577578 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-206ENST00000577578 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.46
CSNK1D-206ENST00000577578 CCDC61Q9Y6R9 512 aa17.89■□□□□ 0.45
CSNK1D-206ENST00000577578 PLCH1Q4KWH8 1693 aa17.88■□□□□ 0.45
CSNK1D-206ENST00000577578 NGDNQ8NEJ9 315 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-206ENST00000577578 PLEKHG3A1L390 1219 aa17.87■□□□□ 0.45
CSNK1D-206ENST00000577578 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
CSNK1D-206ENST00000577578 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
CSNK1D-206ENST00000577578 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
CSNK1D-206ENST00000577578 LMOD2Q6P5Q4 547 aa17.85■□□□□ 0.45
CSNK1D-206ENST00000577578 EP400Q96L91 3159 aa17.84■□□□□ 0.45
CSNK1D-206ENST00000577578 UNC5CLQ8IV45 518 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms