RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 SAFB2Q14151 953 aaKnown RBP eCLIP15.31■□□□□ 0.04
ABR-235ENST00000576964 SLAIN2Q9P270 581 aa15.31■□□□□ 0.04
ABR-235ENST00000576964 EIF3AQ14152 1382 aaKnown RBP15.3■□□□□ 0.04
ABR-235ENST00000576964 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.29■□□□□ 0.04
ABR-235ENST00000576964 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
ABR-235ENST00000576964 NBPF8Q3BBV2 869 aa15.29■□□□□ 0.04
ABR-235ENST00000576964 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
ABR-235ENST00000576964 TRPM1Q7Z4N2 1603 aa15.28■□□□□ 0.04
ABR-235ENST00000576964 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
ABR-235ENST00000576964 RALGAPBQ86X10 1494 aa15.27■□□□□ 0.03
ABR-235ENST00000576964 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
ABR-235ENST00000576964 CENPJQ9HC77 1338 aaPredicted RBP15.25■□□□□ 0.03
ABR-235ENST00000576964 CDC42BPGQ6DT37 1551 aa15.25■□□□□ 0.03
ABR-235ENST00000576964 HIRIP3Q9BW71 556 aaPredicted RBP15.24■□□□□ 0.03
ABR-235ENST00000576964 GPRASP1Q5JY77 1395 aa15.24■□□□□ 0.03
ABR-235ENST00000576964 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
ABR-235ENST00000576964 MST1RQ04912 1400 aa15.23■□□□□ 0.03
ABR-235ENST00000576964 NUTM2FA1L443 756 aa15.22■□□□□ 0.03
ABR-235ENST00000576964 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
ABR-235ENST00000576964 C1orf167Q5SNV9 1468 aa15.21■□□□□ 0.03
ABR-235ENST00000576964 ESCO1Q5FWF5 840 aa15.21■□□□□ 0.03
ABR-235ENST00000576964 WASLO00401 505 aaPredicted RBP15.2■□□□□ 0.02
ABR-235ENST00000576964 BRINP3Q76B58 766 aa15.2■□□□□ 0.02
ABR-235ENST00000576964 ADGRB2O60241 1585 aa15.19■□□□□ 0.02
ABR-235ENST00000576964 HSPA1LP34931 641 aa15.19■□□□□ 0.02
ABR-235ENST00000576964 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
ABR-235ENST00000576964 SLC24A1O60721 1099 aa15.17■□□□□ 0.02
ABR-235ENST00000576964 ORAI2Q96SN7 254 aa15.17■□□□□ 0.02
ABR-235ENST00000576964 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
ABR-235ENST00000576964 EVC2Q86UK5 1308 aa15.17■□□□□ 0.02
ABR-235ENST00000576964 CDK19Q9BWU1 502 aa15.16■□□□□ 0.02
ABR-235ENST00000576964 FMN2Q9NZ56 1722 aa15.16■□□□□ 0.02
ABR-235ENST00000576964 QRICH2Q9H0J4 1663 aa15.16■□□□□ 0.02
ABR-235ENST00000576964 TULP4Q9NRJ4 1543 aa15.15■□□□□ 0.02
ABR-235ENST00000576964 NPHP3Q7Z494 1330 aa15.15■□□□□ 0.02
ABR-235ENST00000576964 USP47Q96K76 1375 aa15.14■□□□□ 0.01
ABR-235ENST00000576964 PHF8Q9UPP1 1060 aa15.14■□□□□ 0.01
ABR-235ENST00000576964 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
ABR-235ENST00000576964 PHLPP1O60346 1717 aa15.12■□□□□ 0.01
ABR-235ENST00000576964 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
ABR-235ENST00000576964 FOXO3O43524 673 aa15.12■□□□□ 0.01
ABR-235ENST00000576964 NUDT16Q96DE0 195 aaKnown RBP15.12■□□□□ 0.01
ABR-235ENST00000576964 AHDC1Q5TGY3 1603 aaPredicted RBP15.12■□□□□ 0.01
ABR-235ENST00000576964 NGDNQ8NEJ9 315 aaKnown RBP15.11■□□□□ 0.01
ABR-235ENST00000576964 LRRC59Q96AG4 307 aaKnown RBP15.11■□□□□ 0.01
ABR-235ENST00000576964 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
ABR-235ENST00000576964 CCDC61Q9Y6R9 512 aa15.11■□□□□ 0.01
ABR-235ENST00000576964 KIF1AQ12756 1690 aa15.11■□□□□ 0.01
ABR-235ENST00000576964 PSME1Q06323 249 aa15.1■□□□□ 0.01
ABR-235ENST00000576964 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
ABR-235ENST00000576964 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
ABR-235ENST00000576964 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABR-235ENST00000576964 JCADQ9P266 1359 aa15.09■□□□□ 0.01
ABR-235ENST00000576964 ATP7BP35670 1465 aa15.08■□□□□ 0.01
ABR-235ENST00000576964 NHSL1Q5SYE7 1610 aa15.08■□□□□ 0
ABR-235ENST00000576964 TMF1P82094 1093 aa15.08■□□□□ 0
ABR-235ENST00000576964 PRR36Q9H6K5 1346 aa15.08■□□□□ 0
ABR-235ENST00000576964 ITSN1Q15811 1721 aa15.08■□□□□ 0
ABR-235ENST00000576964 ATAD2Q6PL18 1390 aa15.08■□□□□ 0
ABR-235ENST00000576964 XPCQ01831 940 aaPredicted RBP15.07■□□□□ 0
ABR-235ENST00000576964 CDCA8Q53HL2 280 aa15.07■□□□□ 0
ABR-235ENST00000576964 KRT28Q7Z3Y7 464 aa15.07■□□□□ 0
ABR-235ENST00000576964 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
ABR-235ENST00000576964 PPIP5K1Q6PFW1 1433 aa15.06■□□□□ 0
ABR-235ENST00000576964 COL16A1Q07092 1604 aaPredicted RBP15.06■□□□□ 0
ABR-235ENST00000576964 USP32Q8NFA0 1604 aa15.06■□□□□ 0
ABR-235ENST00000576964 RGPD8O14715 1765 aaPredicted RBP15.04■□□□□ -0
ABR-235ENST00000576964 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
ABR-235ENST00000576964 TMC1Q8TDI8 760 aa15.04■□□□□ -0
ABR-235ENST00000576964 TESK2Q96S53 571 aa15.04■□□□□ -0
ABR-235ENST00000576964 SPATA31A6Q5VVP1 1343 aa15.03■□□□□ -0
ABR-235ENST00000576964 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
ABR-235ENST00000576964 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
ABR-235ENST00000576964 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
ABR-235ENST00000576964 CABP1Q9NZU7 370 aa15.03■□□□□ -0
ABR-235ENST00000576964 PXDNQ92626 1479 aa15.02■□□□□ -0
ABR-235ENST00000576964 ACEP12821 1306 aa15.02■□□□□ -0
ABR-235ENST00000576964 HSPA5P11021 654 aaKnown RBP15.02■□□□□ -0
ABR-235ENST00000576964 ZEB1P37275 1124 aaPredicted RBP15.01□□□□□ -0.01
ABR-235ENST00000576964 MEX3CQ5U5Q3 659 aaKnown RBP15.01□□□□□ -0.01
ABR-235ENST00000576964 TNS3Q68CZ2 1445 aa15□□□□□ -0.01
ABR-235ENST00000576964 SBNO1A3KN83 1393 aa15□□□□□ -0.01
ABR-235ENST00000576964 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
ABR-235ENST00000576964 ARHGEF10O15013 1369 aa15□□□□□ -0.01
ABR-235ENST00000576964 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
ABR-235ENST00000576964 SPATA31A3Q5VYP0 1347 aa15□□□□□ -0.01
ABR-235ENST00000576964 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
ABR-235ENST00000576964 HDGFL2Q7Z4V5 671 aaPredicted RBP15□□□□□ -0.01
ABR-235ENST00000576964 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
ABR-235ENST00000576964 NUTM2BA6NNL0 878 aaPredicted RBP14.99□□□□□ -0.01
ABR-235ENST00000576964 NUTM2EB1AL46 878 aaPredicted RBP14.99□□□□□ -0.01
ABR-235ENST00000576964 NUTM2AQ8IVF1 878 aaPredicted RBP14.99□□□□□ -0.01
ABR-235ENST00000576964 POLR3GLQ9BT43 218 aa14.99□□□□□ -0.01
ABR-235ENST00000576964 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
ABR-235ENST00000576964 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
ABR-235ENST00000576964 TERF2IPQ9NYB0 399 aa14.99□□□□□ -0.01
ABR-235ENST00000576964 SHPRHQ149N8 1683 aa14.99□□□□□ -0.01
ABR-235ENST00000576964 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
ABR-235ENST00000576964 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
ABR-235ENST00000576964 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms