RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 TRAK1Q9UPV9 953 aa22.18■■□□□ 1.14
TOM1L1-221ENST00000575882 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
TOM1L1-221ENST00000575882 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
TOM1L1-221ENST00000575882 RUNDC1Q96C34 613 aa22.18■■□□□ 1.14
TOM1L1-221ENST00000575882 SETBP1Q9Y6X0 1596 aa22.18■■□□□ 1.14
TOM1L1-221ENST00000575882 SLC12A5Q9H2X9 1139 aa22.17■■□□□ 1.14
TOM1L1-221ENST00000575882 ADGRB3O60242 1522 aa22.17■■□□□ 1.14
TOM1L1-221ENST00000575882 USP19O94966 1318 aa22.17■■□□□ 1.14
TOM1L1-221ENST00000575882 IQSEC2Q5JU85 1478 aa22.16■■□□□ 1.14
TOM1L1-221ENST00000575882 FRAT2O75474 233 aaPredicted RBP22.15■■□□□ 1.14
TOM1L1-221ENST00000575882 RARSP54136 660 aaKnown RBP22.15■■□□□ 1.14
TOM1L1-221ENST00000575882 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
TOM1L1-221ENST00000575882 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.13
TOM1L1-221ENST00000575882 QRICH2Q9H0J4 1663 aa22.13■■□□□ 1.13
TOM1L1-221ENST00000575882 ZC3H13Q5T200 1668 aaKnown RBP22.13■■□□□ 1.13
TOM1L1-221ENST00000575882 SEC24BO95487 1268 aa22.13■■□□□ 1.13
TOM1L1-221ENST00000575882 KIDINS220Q9ULH0 1771 aa22.13■■□□□ 1.13
TOM1L1-221ENST00000575882 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
TOM1L1-221ENST00000575882 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
TOM1L1-221ENST00000575882 BRPF3Q9ULD4 1205 aa22.11■■□□□ 1.13
TOM1L1-221ENST00000575882 WDR63Q8IWG1 891 aa22.11■■□□□ 1.13
TOM1L1-221ENST00000575882 MTHFSP49914 203 aa22.1■■□□□ 1.13
TOM1L1-221ENST00000575882 PMFBP1Q8TBY8 1022 aa22.1■■□□□ 1.13
TOM1L1-221ENST00000575882 RLBP1P12271 317 aa22.1■■□□□ 1.13
TOM1L1-221ENST00000575882 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
TOM1L1-221ENST00000575882 ADGRB1O14514 1584 aa22.09■■□□□ 1.13
TOM1L1-221ENST00000575882 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
TOM1L1-221ENST00000575882 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
TOM1L1-221ENST00000575882 AAMPQ13685 434 aa22.09■■□□□ 1.13
TOM1L1-221ENST00000575882 BCL2L13Q9BXK5 485 aa22.09■■□□□ 1.13
TOM1L1-221ENST00000575882 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
TOM1L1-221ENST00000575882 PCDHB15Q9Y5E8 787 aa22.08■■□□□ 1.13
TOM1L1-221ENST00000575882 PPLO60437 1756 aa22.08■■□□□ 1.12
TOM1L1-221ENST00000575882 USP32Q8NFA0 1604 aa22.08■■□□□ 1.12
TOM1L1-221ENST00000575882 NPATQ14207 1427 aa22.07■■□□□ 1.12
TOM1L1-221ENST00000575882 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
TOM1L1-221ENST00000575882 NLRP1Q9C000 1473 aa22.06■■□□□ 1.12
TOM1L1-221ENST00000575882 ASXL2Q76L83 1435 aa22.05■■□□□ 1.12
TOM1L1-221ENST00000575882 BECN1Q14457 450 aa22.05■■□□□ 1.12
TOM1L1-221ENST00000575882 PDZRN3Q9UPQ7 1066 aa22.03■■□□□ 1.12
TOM1L1-221ENST00000575882 MYH16Q9H6N6 1097 aa22.02■■□□□ 1.12
TOM1L1-221ENST00000575882 GGT6Q6P531 493 aa22.02■■□□□ 1.11
TOM1L1-221ENST00000575882 CFAP65Q6ZU64 1925 aaKnown RBP22.01■■□□□ 1.11
TOM1L1-221ENST00000575882 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
TOM1L1-221ENST00000575882 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.11
TOM1L1-221ENST00000575882 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
TOM1L1-221ENST00000575882 ZMYM3Q14202 1370 aa22■■□□□ 1.11
TOM1L1-221ENST00000575882 RPGRIP1LQ68CZ1 1315 aa22■■□□□ 1.11
TOM1L1-221ENST00000575882 UPF2Q9HAU5 1272 aaKnown RBP22■■□□□ 1.11
TOM1L1-221ENST00000575882 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
TOM1L1-221ENST00000575882 EVC2Q86UK5 1308 aa21.99■■□□□ 1.11
TOM1L1-221ENST00000575882 ANO8Q9HCE9 1232 aaPredicted RBP21.99■■□□□ 1.11
TOM1L1-221ENST00000575882 GLI2P10070 1586 aa21.98■■□□□ 1.11
TOM1L1-221ENST00000575882 NSD2O96028 1365 aa21.98■■□□□ 1.11
TOM1L1-221ENST00000575882 SLKQ9H2G2 1235 aaPredicted RBP21.98■■□□□ 1.11
TOM1L1-221ENST00000575882 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
TOM1L1-221ENST00000575882 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
TOM1L1-221ENST00000575882 FRMPD1Q5SYB0 1578 aa21.98■■□□□ 1.11
TOM1L1-221ENST00000575882 TULP4Q9NRJ4 1543 aa21.97■■□□□ 1.11
TOM1L1-221ENST00000575882 TBC1D32Q96NH3 1257 aa21.97■■□□□ 1.11
TOM1L1-221ENST00000575882 NUTM2DQ5VT03 806 aaPredicted RBP21.96■■□□□ 1.11
TOM1L1-221ENST00000575882 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
TOM1L1-221ENST00000575882 ZKSCAN2Q63HK3 967 aa21.96■■□□□ 1.11
TOM1L1-221ENST00000575882 ADGRB2O60241 1585 aa21.96■■□□□ 1.11
TOM1L1-221ENST00000575882 HECW2Q9P2P5 1572 aa21.95■■□□□ 1.1
TOM1L1-221ENST00000575882 FTSJ3Q8IY81 847 aaKnown RBP21.95■■□□□ 1.1
TOM1L1-221ENST00000575882 CABP2Q9NPB3 220 aa21.94■■□□□ 1.1
TOM1L1-221ENST00000575882 POGZQ7Z3K3 1410 aa21.94■■□□□ 1.1
TOM1L1-221ENST00000575882 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
TOM1L1-221ENST00000575882 DZIP1LQ8IYY4 767 aaKnown RBP21.94■■□□□ 1.1
TOM1L1-221ENST00000575882 ABCC3O15438 1527 aa21.93■■□□□ 1.1
TOM1L1-221ENST00000575882 TSR2Q969E8 191 aaKnown RBP21.93■■□□□ 1.1
TOM1L1-221ENST00000575882 ANTXR1Q9H6X2 564 aa21.92■■□□□ 1.1
TOM1L1-221ENST00000575882 MLH3Q9UHC1 1453 aa21.91■■□□□ 1.1
TOM1L1-221ENST00000575882 POGKQ9P215 609 aa21.91■■□□□ 1.1
TOM1L1-221ENST00000575882 VGFO15240 615 aaPredicted RBP21.9■■□□□ 1.1
TOM1L1-221ENST00000575882 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
TOM1L1-221ENST00000575882 TBC1D2Q9BYX2 928 aa21.9■■□□□ 1.1
TOM1L1-221ENST00000575882 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
TOM1L1-221ENST00000575882 SMC4Q9NTJ3 1288 aa21.9■■□□□ 1.1
TOM1L1-221ENST00000575882 U2SURPO15042 1029 aaKnown RBP21.89■■□□□ 1.1
TOM1L1-221ENST00000575882 CAMSAP1Q5T5Y3 1602 aa21.89■■□□□ 1.1
TOM1L1-221ENST00000575882 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
TOM1L1-221ENST00000575882 NEXMIFQ5QGS0 1516 aa21.89■■□□□ 1.09
TOM1L1-221ENST00000575882 PLEKHF1Q96S99 279 aa21.88■■□□□ 1.09
TOM1L1-221ENST00000575882 CD109Q6YHK3 1445 aa21.88■■□□□ 1.09
TOM1L1-221ENST00000575882 A0A1W2PP64 1363 aa21.88■■□□□ 1.09
TOM1L1-221ENST00000575882 SIGLEC1Q9BZZ2 1709 aa21.87■■□□□ 1.09
TOM1L1-221ENST00000575882 ABCC11Q96J66 1382 aa21.87■■□□□ 1.09
TOM1L1-221ENST00000575882 CFAP74Q9C0B2 1584 aa21.87■■□□□ 1.09
TOM1L1-221ENST00000575882 TRIM27P14373 513 aa21.86■■□□□ 1.09
TOM1L1-221ENST00000575882 TMPOP42166 694 aaKnown RBP21.86■■□□□ 1.09
TOM1L1-221ENST00000575882 GGNBP2Q9H3C7 697 aa21.86■■□□□ 1.09
TOM1L1-221ENST00000575882 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
TOM1L1-221ENST00000575882 PIK3C2BO00750 1634 aa21.85■■□□□ 1.09
TOM1L1-221ENST00000575882 SSH1Q8WYL5 1049 aa21.85■■□□□ 1.09
TOM1L1-221ENST00000575882 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
TOM1L1-221ENST00000575882 ITPRIPQ8IWB1 547 aa21.84■■□□□ 1.09
TOM1L1-221ENST00000575882 HDAC1Q13547 482 aaPredicted RBP21.83■■□□□ 1.09
TOM1L1-221ENST00000575882 COL3A1P02461 1466 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms