RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.5■□□□□ 0.87
NPLOC4-209ENST00000572760 C19orf44Q9H6X5 657 aa20.5■□□□□ 0.87
NPLOC4-209ENST00000572760 CENPJQ9HC77 1338 aaPredicted RBP20.5■□□□□ 0.87
NPLOC4-209ENST00000572760 ATF3P18847 181 aa20.49■□□□□ 0.87
NPLOC4-209ENST00000572760 ADGRL3Q9HAR2 1447 aa20.49■□□□□ 0.87
NPLOC4-209ENST00000572760 QRICH2Q9H0J4 1663 aa20.48■□□□□ 0.87
NPLOC4-209ENST00000572760 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
NPLOC4-209ENST00000572760 TOM1O60784 492 aa20.46■□□□□ 0.87
NPLOC4-209ENST00000572760 CADPS2Q86UW7 1296 aa20.46■□□□□ 0.87
NPLOC4-209ENST00000572760 UBAP1LF5GYI3 381 aa20.45■□□□□ 0.86
NPLOC4-209ENST00000572760 USP47Q96K76 1375 aa20.45■□□□□ 0.86
NPLOC4-209ENST00000572760 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
NPLOC4-209ENST00000572760 DCCP43146 1447 aa20.42■□□□□ 0.86
NPLOC4-209ENST00000572760 ST20-MTHFSA0A0A6YYL1 179 aa20.41■□□□□ 0.86
NPLOC4-209ENST00000572760 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.862e-15■■■■□ 23.9
NPLOC4-209ENST00000572760 CDC42BPGQ6DT37 1551 aa20.41■□□□□ 0.86
NPLOC4-209ENST00000572760 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
NPLOC4-209ENST00000572760 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.86
NPLOC4-209ENST00000572760 ADGRB2O60241 1585 aa20.39■□□□□ 0.85
NPLOC4-209ENST00000572760 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
NPLOC4-209ENST00000572760 RGPD8O14715 1765 aaPredicted RBP20.38■□□□□ 0.85
NPLOC4-209ENST00000572760 WASLO00401 505 aaPredicted RBP20.37■□□□□ 0.85
NPLOC4-209ENST00000572760 PIP4K2BP78356 416 aa20.37■□□□□ 0.85
NPLOC4-209ENST00000572760 SLAIN2Q9P270 581 aa20.37■□□□□ 0.85
NPLOC4-209ENST00000572760 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
NPLOC4-209ENST00000572760 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
NPLOC4-209ENST00000572760 CDK19Q9BWU1 502 aa20.36■□□□□ 0.85
NPLOC4-209ENST00000572760 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
NPLOC4-209ENST00000572760 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
NPLOC4-209ENST00000572760 MST1RQ04912 1400 aa20.34■□□□□ 0.85
NPLOC4-209ENST00000572760 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
NPLOC4-209ENST00000572760 C1orf167Q5SNV9 1468 aa20.31■□□□□ 0.84
NPLOC4-209ENST00000572760 ITSN1Q15811 1721 aa20.31■□□□□ 0.84
NPLOC4-209ENST00000572760 TMF1P82094 1093 aa20.31■□□□□ 0.84
NPLOC4-209ENST00000572760 ROBO1Q9Y6N7 1651 aa20.3■□□□□ 0.84
NPLOC4-209ENST00000572760 ESCO1Q5FWF5 840 aa20.3■□□□□ 0.84
NPLOC4-209ENST00000572760 TESK2Q96S53 571 aa20.3■□□□□ 0.84
NPLOC4-209ENST00000572760 CABP2Q9NPB3 220 aa20.3■□□□□ 0.84
NPLOC4-209ENST00000572760 TULP4Q9NRJ4 1543 aa20.3■□□□□ 0.84
NPLOC4-209ENST00000572760 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
NPLOC4-209ENST00000572760 NUDT16Q96DE0 195 aaKnown RBP20.29■□□□□ 0.84
NPLOC4-209ENST00000572760 ANKARQ7Z5J8 1434 aa20.28■□□□□ 0.84
NPLOC4-209ENST00000572760 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
NPLOC4-209ENST00000572760 ORAI2Q96SN7 254 aa20.27■□□□□ 0.84
NPLOC4-209ENST00000572760 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
NPLOC4-209ENST00000572760 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
NPLOC4-209ENST00000572760 BRINP3Q76B58 766 aa20.25■□□□□ 0.83
NPLOC4-209ENST00000572760 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
NPLOC4-209ENST00000572760 KIF1AQ12756 1690 aa20.25■□□□□ 0.83
NPLOC4-209ENST00000572760 ATP7BP35670 1465 aa20.24■□□□□ 0.83
NPLOC4-209ENST00000572760 PHF8Q9UPP1 1060 aa20.24■□□□□ 0.83
NPLOC4-209ENST00000572760 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
NPLOC4-209ENST00000572760 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
NPLOC4-209ENST00000572760 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
NPLOC4-209ENST00000572760 DISP3Q9P2K9 1392 aa20.22■□□□□ 0.83
NPLOC4-209ENST00000572760 TOPAZ1Q8N9V7 1692 aa20.22■□□□□ 0.83
NPLOC4-209ENST00000572760 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
NPLOC4-209ENST00000572760 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
NPLOC4-209ENST00000572760 PUS7Q96PZ0 661 aaKnown RBP20.21■□□□□ 0.83
NPLOC4-209ENST00000572760 PPIP5K1Q6PFW1 1433 aa20.2■□□□□ 0.82
NPLOC4-209ENST00000572760 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
NPLOC4-209ENST00000572760 FOXO3O43524 673 aa20.19■□□□□ 0.82
NPLOC4-209ENST00000572760 NHSL1Q5SYE7 1610 aa20.19■□□□□ 0.82
NPLOC4-209ENST00000572760 PSME1Q06323 249 aa20.18■□□□□ 0.82
NPLOC4-209ENST00000572760 CABP1Q9NZU7 370 aa20.18■□□□□ 0.82
NPLOC4-209ENST00000572760 NPHP3Q7Z494 1330 aa20.18■□□□□ 0.82
NPLOC4-209ENST00000572760 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
NPLOC4-209ENST00000572760 DDX17Q92841 729 aaKnown RBP20.16■□□□□ 0.82
NPLOC4-209ENST00000572760 ACEP12821 1306 aa20.15■□□□□ 0.82
NPLOC4-209ENST00000572760 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
NPLOC4-209ENST00000572760 HSPA1LP34931 641 aa20.14■□□□□ 0.81
NPLOC4-209ENST00000572760 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
NPLOC4-209ENST00000572760 KRT28Q7Z3Y7 464 aa20.14■□□□□ 0.81
NPLOC4-209ENST00000572760 SLC12A5Q9H2X9 1139 aa20.13■□□□□ 0.81
NPLOC4-209ENST00000572760 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
NPLOC4-209ENST00000572760 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
NPLOC4-209ENST00000572760 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
NPLOC4-209ENST00000572760 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
NPLOC4-209ENST00000572760 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
NPLOC4-209ENST00000572760 POLR3AO14802 1390 aaPredicted RBP20.1■□□□□ 0.81
NPLOC4-209ENST00000572760 ZNF692Q9BU19 519 aaPredicted RBP20.1■□□□□ 0.81
NPLOC4-209ENST00000572760 SOS2Q07890 1332 aaPredicted RBP20.09■□□□□ 0.81
NPLOC4-209ENST00000572760 PAK3O75914 559 aaPredicted RBP20.09■□□□□ 0.81
NPLOC4-209ENST00000572760 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
NPLOC4-209ENST00000572760 LRRC59Q96AG4 307 aaKnown RBP20.09■□□□□ 0.81
NPLOC4-209ENST00000572760 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
NPLOC4-209ENST00000572760 KIF7Q2M1P5 1343 aa20.08■□□□□ 0.81
NPLOC4-209ENST00000572760 MYOM1P52179 1685 aa20.08■□□□□ 0.81
NPLOC4-209ENST00000572760 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.81
NPLOC4-209ENST00000572760 PXDNQ92626 1479 aa20.07■□□□□ 0.8
NPLOC4-209ENST00000572760 MON2Q7Z3U7 1717 aa20.07■□□□□ 0.8
NPLOC4-209ENST00000572760 KTN1Q86UP2 1357 aaKnown RBP20.07■□□□□ 0.8
NPLOC4-209ENST00000572760 CCDC7Q96M83 1385 aa20.06■□□□□ 0.8
NPLOC4-209ENST00000572760 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
NPLOC4-209ENST00000572760 USP6P35125 1406 aa20.04■□□□□ 0.8
NPLOC4-209ENST00000572760 SBNO1A3KN83 1393 aa20.04■□□□□ 0.8
NPLOC4-209ENST00000572760 WASHC2AQ641Q2 1341 aa20.03■□□□□ 0.8
NPLOC4-209ENST00000572760 CPSF1Q10570 1443 aaKnown RBP20.03■□□□□ 0.8
NPLOC4-209ENST00000572760 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
NPLOC4-209ENST00000572760 BRD4O60885 1362 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms