RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
SMG6-210ENST00000572205 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
SMG6-210ENST00000572205 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
SMG6-210ENST00000572205 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
SMG6-210ENST00000572205 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
SMG6-210ENST00000572205 MSH6P52701 1360 aa12.84□□□□□ -0.35
SMG6-210ENST00000572205 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
SMG6-210ENST00000572205 PLEKHH1Q9ULM0 1364 aa12.83□□□□□ -0.36
SMG6-210ENST00000572205 HSPA1LP34931 641 aa12.83□□□□□ -0.36
SMG6-210ENST00000572205 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
SMG6-210ENST00000572205 TOM1O60784 492 aa12.82□□□□□ -0.36
SMG6-210ENST00000572205 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
SMG6-210ENST00000572205 BCANQ96GW7 911 aa12.81□□□□□ -0.36
SMG6-210ENST00000572205 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
SMG6-210ENST00000572205 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
SMG6-210ENST00000572205 C1orf167Q5SNV9 1468 aa12.79□□□□□ -0.36
SMG6-210ENST00000572205 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
SMG6-210ENST00000572205 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
SMG6-210ENST00000572205 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
SMG6-210ENST00000572205 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
SMG6-210ENST00000572205 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.36
SMG6-210ENST00000572205 ABCA3Q99758 1704 aa12.77□□□□□ -0.36
SMG6-210ENST00000572205 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
SMG6-210ENST00000572205 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
SMG6-210ENST00000572205 LRP6O75581 1613 aa12.77□□□□□ -0.37
SMG6-210ENST00000572205 PXDNQ92626 1479 aa12.76□□□□□ -0.37
SMG6-210ENST00000572205 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
SMG6-210ENST00000572205 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
SMG6-210ENST00000572205 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
SMG6-210ENST00000572205 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
SMG6-210ENST00000572205 BRINP3Q76B58 766 aa12.74□□□□□ -0.37
SMG6-210ENST00000572205 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
SMG6-210ENST00000572205 SIN3AQ96ST3 1273 aa12.73□□□□□ -0.37
SMG6-210ENST00000572205 MARF1Q9Y4F3 1742 aaKnown RBP12.73□□□□□ -0.37
SMG6-210ENST00000572205 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
SMG6-210ENST00000572205 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
SMG6-210ENST00000572205 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
SMG6-210ENST00000572205 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
SMG6-210ENST00000572205 ATP7BP35670 1465 aa12.72□□□□□ -0.37
SMG6-210ENST00000572205 ALS2Q96Q42 1657 aa12.71□□□□□ -0.37
SMG6-210ENST00000572205 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
SMG6-210ENST00000572205 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
SMG6-210ENST00000572205 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
SMG6-210ENST00000572205 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
SMG6-210ENST00000572205 ATF3P18847 181 aa12.68□□□□□ -0.38
SMG6-210ENST00000572205 STK26Q9P289 416 aa12.68□□□□□ -0.38
SMG6-210ENST00000572205 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
SMG6-210ENST00000572205 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
SMG6-210ENST00000572205 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
SMG6-210ENST00000572205 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
SMG6-210ENST00000572205 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
SMG6-210ENST00000572205 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
SMG6-210ENST00000572205 JCADQ9P266 1359 aa12.66□□□□□ -0.38
SMG6-210ENST00000572205 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
SMG6-210ENST00000572205 NRKQ7Z2Y5 1582 aa12.65□□□□□ -0.38
SMG6-210ENST00000572205 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
SMG6-210ENST00000572205 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
SMG6-210ENST00000572205 SOS2Q07890 1332 aaPredicted RBP12.64□□□□□ -0.39
SMG6-210ENST00000572205 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
SMG6-210ENST00000572205 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
SMG6-210ENST00000572205 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
SMG6-210ENST00000572205 PHRF1Q9P1Y6 1649 aaKnown RBP12.63□□□□□ -0.39
SMG6-210ENST00000572205 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
SMG6-210ENST00000572205 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
SMG6-210ENST00000572205 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
SMG6-210ENST00000572205 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
SMG6-210ENST00000572205 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
SMG6-210ENST00000572205 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
SMG6-210ENST00000572205 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
SMG6-210ENST00000572205 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
SMG6-210ENST00000572205 USP54Q70EL1 1684 aa12.59□□□□□ -0.39
SMG6-210ENST00000572205 SAFB2Q14151 953 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMG6-210ENST00000572205 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
SMG6-210ENST00000572205 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
SMG6-210ENST00000572205 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
SMG6-210ENST00000572205 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
SMG6-210ENST00000572205 MYOM1P52179 1685 aa12.57□□□□□ -0.4
SMG6-210ENST00000572205 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
SMG6-210ENST00000572205 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
SMG6-210ENST00000572205 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
SMG6-210ENST00000572205 NUTM2FA1L443 756 aa12.56□□□□□ -0.4
SMG6-210ENST00000572205 NWD2Q9ULI1 1742 aa12.56□□□□□ -0.4
SMG6-210ENST00000572205 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
SMG6-210ENST00000572205 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
SMG6-210ENST00000572205 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
SMG6-210ENST00000572205 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
SMG6-210ENST00000572205 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
SMG6-210ENST00000572205 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
SMG6-210ENST00000572205 EIF3AQ14152 1382 aaKnown RBP12.55□□□□□ -0.4
SMG6-210ENST00000572205 ESCO1Q5FWF5 840 aa12.54□□□□□ -0.4
SMG6-210ENST00000572205 CLSPNQ9HAW4 1339 aa12.54□□□□□ -0.4
SMG6-210ENST00000572205 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
SMG6-210ENST00000572205 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
SMG6-210ENST00000572205 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
SMG6-210ENST00000572205 EP400Q96L91 3159 aa12.53□□□□□ -0.4
SMG6-210ENST00000572205 POGKQ9P215 609 aa12.53□□□□□ -0.4
SMG6-210ENST00000572205 SPATA31A3Q5VYP0 1347 aa12.53□□□□□ -0.4
SMG6-210ENST00000572205 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
SMG6-210ENST00000572205 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.4
SMG6-210ENST00000572205 FOXO3O43524 673 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms