RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
NPLOC4-206ENST00000571714 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-206ENST00000571714 TECPR2O15040 1411 aa16.83■□□□□ 0.28
NPLOC4-206ENST00000571714 ATRNO75882 1429 aa16.83■□□□□ 0.28
NPLOC4-206ENST00000571714 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 ADGRF5Q8IZF2 1346 aa16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 FOXD1Q16676 465 aa16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 FNBP4Q8N3X1 1017 aaPredicted RBP16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 USP21Q9UK80 565 aa16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 MARF1Q9Y4F3 1742 aaKnown RBP16.82■□□□□ 0.28
NPLOC4-206ENST00000571714 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
NPLOC4-206ENST00000571714 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
NPLOC4-206ENST00000571714 NPHP3Q7Z494 1330 aa16.79■□□□□ 0.28
NPLOC4-206ENST00000571714 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
NPLOC4-206ENST00000571714 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
NPLOC4-206ENST00000571714 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
NPLOC4-206ENST00000571714 PLEKHH1Q9ULM0 1364 aa16.78■□□□□ 0.28
NPLOC4-206ENST00000571714 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
NPLOC4-206ENST00000571714 PIK3C2GO75747 1445 aa16.78■□□□□ 0.28
NPLOC4-206ENST00000571714 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-206ENST00000571714 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-206ENST00000571714 FOXO3O43524 673 aa16.76■□□□□ 0.27
NPLOC4-206ENST00000571714 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
NPLOC4-206ENST00000571714 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.75■□□□□ 0.27
NPLOC4-206ENST00000571714 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
NPLOC4-206ENST00000571714 EP400Q96L91 3159 aa16.75■□□□□ 0.27
NPLOC4-206ENST00000571714 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
NPLOC4-206ENST00000571714 STK26Q9P289 416 aa16.74■□□□□ 0.27
NPLOC4-206ENST00000571714 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
NPLOC4-206ENST00000571714 ANKRD30BQ9BXX2 1392 aa16.74■□□□□ 0.27
NPLOC4-206ENST00000571714 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
NPLOC4-206ENST00000571714 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
NPLOC4-206ENST00000571714 GLI3P10071 1580 aa16.72■□□□□ 0.27
NPLOC4-206ENST00000571714 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-206ENST00000571714 SLIT2O94813 1529 aa16.72■□□□□ 0.27
NPLOC4-206ENST00000571714 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
NPLOC4-206ENST00000571714 SRCAPQ6ZRS2 3230 aa16.72■□□□□ 0.27
NPLOC4-206ENST00000571714 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
NPLOC4-206ENST00000571714 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
NPLOC4-206ENST00000571714 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
NPLOC4-206ENST00000571714 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
NPLOC4-206ENST00000571714 GJD4Q96KN9 370 aaPredicted RBP16.69■□□□□ 0.26
NPLOC4-206ENST00000571714 ABCA3Q99758 1704 aa16.68■□□□□ 0.26
NPLOC4-206ENST00000571714 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
NPLOC4-206ENST00000571714 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
NPLOC4-206ENST00000571714 PLCH1Q4KWH8 1693 aa16.65■□□□□ 0.26
NPLOC4-206ENST00000571714 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
NPLOC4-206ENST00000571714 BRWD3Q6RI45 1802 aa16.64■□□□□ 0.25
NPLOC4-206ENST00000571714 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
NPLOC4-206ENST00000571714 SIRT1Q96EB6 747 aa16.64■□□□□ 0.25
NPLOC4-206ENST00000571714 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
NPLOC4-206ENST00000571714 NWD2Q9ULI1 1742 aa16.62■□□□□ 0.25
NPLOC4-206ENST00000571714 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
NPLOC4-206ENST00000571714 CCDC125Q86Z20 511 aa16.62■□□□□ 0.25
NPLOC4-206ENST00000571714 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
NPLOC4-206ENST00000571714 DLC1Q96QB1 1528 aa16.61■□□□□ 0.25
NPLOC4-206ENST00000571714 ADGRB1O14514 1584 aa16.61■□□□□ 0.25
NPLOC4-206ENST00000571714 CABLES1Q8TDN4 633 aa16.61■□□□□ 0.25
NPLOC4-206ENST00000571714 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
NPLOC4-206ENST00000571714 PHF8Q9UPP1 1060 aa16.61■□□□□ 0.25
NPLOC4-206ENST00000571714 BLMP54132 1417 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-206ENST00000571714 SBNO1A3KN83 1393 aa16.6■□□□□ 0.25
NPLOC4-206ENST00000571714 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
NPLOC4-206ENST00000571714 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
NPLOC4-206ENST00000571714 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
NPLOC4-206ENST00000571714 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
NPLOC4-206ENST00000571714 ANKARQ7Z5J8 1434 aa16.58■□□□□ 0.24
NPLOC4-206ENST00000571714 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
NPLOC4-206ENST00000571714 VPS72Q15906 364 aa16.57■□□□□ 0.24
NPLOC4-206ENST00000571714 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
NPLOC4-206ENST00000571714 ARHGEF10O15013 1369 aa16.56■□□□□ 0.24
NPLOC4-206ENST00000571714 PSME1Q06323 249 aa16.56■□□□□ 0.24
NPLOC4-206ENST00000571714 SEPT12Q8IYM1 358 aa16.56■□□□□ 0.24
NPLOC4-206ENST00000571714 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
NPLOC4-206ENST00000571714 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
NPLOC4-206ENST00000571714 CRYBG1Q9Y4K1 1723 aa16.55■□□□□ 0.24
NPLOC4-206ENST00000571714 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-206ENST00000571714 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-206ENST00000571714 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
NPLOC4-206ENST00000571714 PRR36Q9H6K5 1346 aa16.52■□□□□ 0.24
NPLOC4-206ENST00000571714 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
NPLOC4-206ENST00000571714 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
NPLOC4-206ENST00000571714 LMOD2Q6P5Q4 547 aa16.52■□□□□ 0.24
NPLOC4-206ENST00000571714 RAB3GAP2Q9H2M9 1393 aa16.51■□□□□ 0.23
NPLOC4-206ENST00000571714 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-206ENST00000571714 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-206ENST00000571714 POGKQ9P215 609 aa16.5■□□□□ 0.23
NPLOC4-206ENST00000571714 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-206ENST00000571714 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
NPLOC4-206ENST00000571714 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-206ENST00000571714 LRP5O75197 1615 aa16.48■□□□□ 0.23
NPLOC4-206ENST00000571714 TRAK1Q9UPV9 953 aa16.48■□□□□ 0.23
NPLOC4-206ENST00000571714 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-206ENST00000571714 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-206ENST00000571714 THSD7AQ9UPZ6 1657 aa16.47■□□□□ 0.23
NPLOC4-206ENST00000571714 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
NPLOC4-206ENST00000571714 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
NPLOC4-206ENST00000571714 EIF3AQ14152 1382 aaKnown RBP16.46■□□□□ 0.23
NPLOC4-206ENST00000571714 ATP7BP35670 1465 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms