RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 ESCO1Q5FWF5 840 aa31.43■■■□□ 2.62
PKD1-240ENST00000570253 RGS12O14924 1447 aa31.42■■■□□ 2.62
PKD1-240ENST00000570253 RGL3Q3MIN7 710 aa31.42■■■□□ 2.62
PKD1-240ENST00000570253 ANKRD30BQ9BXX2 1392 aa31.42■■■□□ 2.62
PKD1-240ENST00000570253 USP21Q9UK80 565 aa31.41■■■□□ 2.62
PKD1-240ENST00000570253 LRPPRCP42704 1394 aaKnown RBP31.4■■■□□ 2.62
PKD1-240ENST00000570253 TRPC5Q9UL62 973 aaPredicted RBP31.39■■■□□ 2.62
PKD1-240ENST00000570253 STK26Q9P289 416 aa31.38■■■□□ 2.61
PKD1-240ENST00000570253 ADGRF5Q8IZF2 1346 aa31.38■■■□□ 2.61
PKD1-240ENST00000570253 ACIN1Q9UKV3 1341 aaKnown RBP31.38■■■□□ 2.61
PKD1-240ENST00000570253 COL22A1Q8NFW1 1626 aaPredicted RBP31.36■■■□□ 2.61
PKD1-240ENST00000570253 MPHOSPH9Q99550 1183 aa31.35■■■□□ 2.61
PKD1-240ENST00000570253 TECPR2O15040 1411 aa31.33■■■□□ 2.61
PKD1-240ENST00000570253 IFT172Q9UG01 1749 aa31.32■■■□□ 2.61
PKD1-240ENST00000570253 ATAD2Q6PL18 1390 aa31.32■■■□□ 2.6
PKD1-240ENST00000570253 SPATA31E1Q6ZUB1 1445 aa31.32■■■□□ 2.6
PKD1-240ENST00000570253 FNBP4Q8N3X1 1017 aaPredicted RBP31.31■■■□□ 2.6
PKD1-240ENST00000570253 KNDC1Q76NI1 1749 aa31.31■■■□□ 2.6
PKD1-240ENST00000570253 FOXO3O43524 673 aa31.3■■■□□ 2.6
PKD1-240ENST00000570253 ABCC11Q96J66 1382 aa31.3■■■□□ 2.6
PKD1-240ENST00000570253 WAPLQ7Z5K2 1190 aa31.29■■■□□ 2.6
PKD1-240ENST00000570253 PXDNQ92626 1479 aa31.28■■■□□ 2.6
PKD1-240ENST00000570253 NUTM2FA1L443 756 aa31.28■■■□□ 2.6
PKD1-240ENST00000570253 MYOM2P54296 1465 aa31.27■■■□□ 2.6
PKD1-240ENST00000570253 PIK3C2GO75747 1445 aa31.27■■■□□ 2.6
PKD1-240ENST00000570253 TMEM132EQ6IEE7 984 aa31.26■■■□□ 2.59
PKD1-240ENST00000570253 XPCQ01831 940 aaPredicted RBP31.25■■■□□ 2.59
PKD1-240ENST00000570253 ATRNO75882 1429 aa31.24■■■□□ 2.59
PKD1-240ENST00000570253 KIF1AQ12756 1690 aa31.24■■■□□ 2.59
PKD1-240ENST00000570253 MARF1Q9Y4F3 1742 aaKnown RBP31.24■■■□□ 2.59
PKD1-240ENST00000570253 YTHDC2Q9H6S0 1430 aaKnown RBP31.24■■■□□ 2.59
PKD1-240ENST00000570253 FMN2Q9NZ56 1722 aa31.21■■■□□ 2.59
PKD1-240ENST00000570253 PLEKHH1Q9ULM0 1364 aa31.19■■■□□ 2.58
PKD1-240ENST00000570253 SIRT1Q96EB6 747 aa31.19■■■□□ 2.58
PKD1-240ENST00000570253 DHX57Q6P158 1386 aaKnown RBP31.18■■■□□ 2.58
PKD1-240ENST00000570253 HAP1P54257 671 aaPredicted RBP31.17■■■□□ 2.58
PKD1-240ENST00000570253 PSME1Q06323 249 aa31.15■■■□□ 2.58
PKD1-240ENST00000570253 KRT28Q7Z3Y7 464 aa31.14■■■□□ 2.58
PKD1-240ENST00000570253 C14orf93Q9H972 538 aaKnown RBP31.14■■■□□ 2.58
PKD1-240ENST00000570253 SPATA31A3Q5VYP0 1347 aa31.14■■■□□ 2.58
PKD1-240ENST00000570253 BCL9LQ86UU0 1499 aa31.14■■■□□ 2.57
PKD1-240ENST00000570253 GJD4Q96KN9 370 aaPredicted RBP31.13■■■□□ 2.57
PKD1-240ENST00000570253 CCDC125Q86Z20 511 aa31.11■■■□□ 2.57
PKD1-240ENST00000570253 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.11■■■□□ 2.57
PKD1-240ENST00000570253 PHF8Q9UPP1 1060 aa31.1■■■□□ 2.57
PKD1-240ENST00000570253 UNC5CLQ8IV45 518 aa31.09■■■□□ 2.57
PKD1-240ENST00000570253 CFAP70Q5T0N1 1121 aa31.08■■■□□ 2.57
PKD1-240ENST00000570253 POGKQ9P215 609 aa31.08■■■□□ 2.57
PKD1-240ENST00000570253 NRXN1Q9ULB1 1477 aa31.08■■■□□ 2.57
PKD1-240ENST00000570253 TNS3Q68CZ2 1445 aa31.07■■■□□ 2.56
PKD1-240ENST00000570253 USP32Q8NFA0 1604 aa31.06■■■□□ 2.56
PKD1-240ENST00000570253 PRAM1Q96QH2 718 aa31.05■■■□□ 2.56
PKD1-240ENST00000570253 ZRANB1Q9UGI0 708 aa31.05■■■□□ 2.56
PKD1-240ENST00000570253 SAFB2Q14151 953 aaKnown RBP eCLIP31.04■■■□□ 2.56
PKD1-240ENST00000570253 LMOD2Q6P5Q4 547 aa31.04■■■□□ 2.56
PKD1-240ENST00000570253 SLIT2O94813 1529 aa31.03■■■□□ 2.56
PKD1-240ENST00000570253 RGPD8O14715 1765 aaPredicted RBP31.03■■■□□ 2.56
PKD1-240ENST00000570253 ARHGEF10O15013 1369 aa31.02■■■□□ 2.56
PKD1-240ENST00000570253 RALGAPBQ86X10 1494 aa31.01■■■□□ 2.55
PKD1-240ENST00000570253 DLC1Q96QB1 1528 aa31■■■□□ 2.55
PKD1-240ENST00000570253 SBNO1A3KN83 1393 aa31■■■□□ 2.55
PKD1-240ENST00000570253 ANKARQ7Z5J8 1434 aa30.98■■■□□ 2.55
PKD1-240ENST00000570253 EIF3AQ14152 1382 aaKnown RBP30.98■■■□□ 2.55
PKD1-240ENST00000570253 RAB3GAP2Q9H2M9 1393 aa30.97■■■□□ 2.55
PKD1-240ENST00000570253 PLEKHG5O94827 1062 aa30.97■■■□□ 2.55
PKD1-240ENST00000570253 CCDC9Q9Y3X0 531 aaKnown RBP30.97■■■□□ 2.55
PKD1-240ENST00000570253 GLI3P10071 1580 aa30.95■■■□□ 2.54
PKD1-240ENST00000570253 SF3B2Q13435 895 aaKnown RBP30.94■■■□□ 2.54
PKD1-240ENST00000570253 NWD2Q9ULI1 1742 aa30.93■■■□□ 2.54
PKD1-240ENST00000570253 ADGRB2O60241 1585 aa30.93■■■□□ 2.54
PKD1-240ENST00000570253 PMFBP1Q8TBY8 1022 aa30.93■■■□□ 2.54
PKD1-240ENST00000570253 CABLES1Q8TDN4 633 aa30.93■■■□□ 2.54
PKD1-240ENST00000570253 EP400Q96L91 3159 aa30.93■■■□□ 2.54
PKD1-240ENST00000570253 VPS72Q15906 364 aa30.92■■■□□ 2.54
PKD1-240ENST00000570253 GPRASP1Q5JY77 1395 aa30.92■■■□□ 2.54
PKD1-240ENST00000570253 PLCH1Q4KWH8 1693 aa30.91■■■□□ 2.54
PKD1-240ENST00000570253 TRAK1Q9UPV9 953 aa30.91■■■□□ 2.54
PKD1-240ENST00000570253 BLMP54132 1417 aaPredicted RBP30.9■■■□□ 2.54
PKD1-240ENST00000570253 STAC3Q96MF2 364 aa30.9■■■□□ 2.54
PKD1-240ENST00000570253 ABCA3Q99758 1704 aa30.89■■■□□ 2.54
PKD1-240ENST00000570253 SEPT12Q8IYM1 358 aa30.88■■■□□ 2.53
PKD1-240ENST00000570253 KDM2AQ9Y2K7 1162 aa30.88■■■□□ 2.53
PKD1-240ENST00000570253 DCAF11Q8TEB1 546 aa30.87■■■□□ 2.53
PKD1-240ENST00000570253 ADGRB1O14514 1584 aa30.87■■■□□ 2.53
PKD1-240ENST00000570253 A0A0G2JS52 829 aa30.86■■■□□ 2.53
PKD1-240ENST00000570253 MYT1Q01538 1121 aa30.86■■■□□ 2.53
PKD1-240ENST00000570253 HIRIP3Q9BW71 556 aaPredicted RBP30.86■■■□□ 2.53
PKD1-240ENST00000570253 MINK1Q8N4C8 1332 aaPredicted RBP30.85■■■□□ 2.53
PKD1-240ENST00000570253 BRWD3Q6RI45 1802 aa30.84■■■□□ 2.53
PKD1-240ENST00000570253 TULP4Q9NRJ4 1543 aa30.83■■■□□ 2.53
PKD1-240ENST00000570253 KRT27Q7Z3Y8 459 aa30.81■■■□□ 2.52
PKD1-240ENST00000570253 NGDNQ8NEJ9 315 aaKnown RBP30.81■■■□□ 2.52
PKD1-240ENST00000570253 WASLO00401 505 aaPredicted RBP30.8■■■□□ 2.52
PKD1-240ENST00000570253 FAM83GA6ND36 823 aa30.79■■■□□ 2.52
PKD1-240ENST00000570253 TRPM3Q9HCF6 1732 aaPredicted RBP30.78■■■□□ 2.52
PKD1-240ENST00000570253 ONECUT3O60422 494 aaPredicted RBP30.78■■■□□ 2.52
PKD1-240ENST00000570253 PAK3O75914 559 aaPredicted RBP30.77■■■□□ 2.52
PKD1-240ENST00000570253 BTG4Q9NY30 223 aa30.77■■■□□ 2.52
PKD1-240ENST00000570253 COL14A1Q05707 1796 aaKnown RBP30.76■■■□□ 2.51
PKD1-240ENST00000570253 ALS2Q96Q42 1657 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms