RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 FMN2Q9NZ56 1722 aa25.15■■□□□ 1.62
MAP1LC3B-208ENST00000570189 DLC1Q96QB1 1528 aa25.14■■□□□ 1.62
MAP1LC3B-208ENST00000570189 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
MAP1LC3B-208ENST00000570189 TMEM132EQ6IEE7 984 aa25.13■■□□□ 1.61
MAP1LC3B-208ENST00000570189 POTEAQ6S8J7 498 aa25.13■■□□□ 1.61
MAP1LC3B-208ENST00000570189 ADGRB1O14514 1584 aa25.13■■□□□ 1.61
MAP1LC3B-208ENST00000570189 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
MAP1LC3B-208ENST00000570189 PNPLA6Q8IY17 1366 aa25.12■■□□□ 1.61
MAP1LC3B-208ENST00000570189 PLEKHH1Q9ULM0 1364 aa25.1■■□□□ 1.61
MAP1LC3B-208ENST00000570189 ORAI2Q96SN7 254 aa25.1■■□□□ 1.61
MAP1LC3B-208ENST00000570189 STK26Q9P289 416 aa25.1■■□□□ 1.61
MAP1LC3B-208ENST00000570189 COL22A1Q8NFW1 1626 aaPredicted RBP25.1■■□□□ 1.61
MAP1LC3B-208ENST00000570189 CFAP70Q5T0N1 1121 aa25.09■■□□□ 1.61
MAP1LC3B-208ENST00000570189 WAPLQ7Z5K2 1190 aa25.09■■□□□ 1.61
MAP1LC3B-208ENST00000570189 KIF1AQ12756 1690 aa25.08■■□□□ 1.61
MAP1LC3B-208ENST00000570189 ADGRB2O60241 1585 aa25.06■■□□□ 1.6
MAP1LC3B-208ENST00000570189 DDX17Q92841 729 aaKnown RBP25.06■■□□□ 1.6
MAP1LC3B-208ENST00000570189 PXDNQ92626 1479 aa25.06■■□□□ 1.6
MAP1LC3B-208ENST00000570189 ZNF772Q68DY9 489 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3B-208ENST00000570189 NPHP3Q7Z494 1330 aa25.05■■□□□ 1.6
MAP1LC3B-208ENST00000570189 MEX3CQ5U5Q3 659 aaKnown RBP25.03■■□□□ 1.6
MAP1LC3B-208ENST00000570189 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
MAP1LC3B-208ENST00000570189 RGPD8O14715 1765 aaPredicted RBP25.01■■□□□ 1.59
MAP1LC3B-208ENST00000570189 ESCO1Q5FWF5 840 aa25■■□□□ 1.59
MAP1LC3B-208ENST00000570189 DCAF11Q8TEB1 546 aa25■■□□□ 1.59
MAP1LC3B-208ENST00000570189 NUTM2BA6NNL0 878 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3B-208ENST00000570189 NUTM2EB1AL46 878 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3B-208ENST00000570189 NUTM2AQ8IVF1 878 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3B-208ENST00000570189 MARF1Q9Y4F3 1742 aaKnown RBP24.97■■□□□ 1.59
MAP1LC3B-208ENST00000570189 CDK12Q9NYV4 1490 aaPredicted RBP24.96■■□□□ 1.59
MAP1LC3B-208ENST00000570189 ARHGEF28Q8N1W1 1705 aaKnown RBP24.96■■□□□ 1.59
MAP1LC3B-208ENST00000570189 PRAM1Q96QH2 718 aa24.96■■□□□ 1.59
MAP1LC3B-208ENST00000570189 ANKARQ7Z5J8 1434 aa24.95■■□□□ 1.59
MAP1LC3B-208ENST00000570189 USP32Q8NFA0 1604 aa24.95■■□□□ 1.58
MAP1LC3B-208ENST00000570189 AFF2P51816 1311 aa24.93■■□□□ 1.58
MAP1LC3B-208ENST00000570189 FOXO3O43524 673 aa24.92■■□□□ 1.58
MAP1LC3B-208ENST00000570189 KDM2AQ9Y2K7 1162 aa24.92■■□□□ 1.58
MAP1LC3B-208ENST00000570189 POGKQ9P215 609 aa24.9■■□□□ 1.58
MAP1LC3B-208ENST00000570189 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
MAP1LC3B-208ENST00000570189 NUTM2FA1L443 756 aa24.88■■□□□ 1.57
MAP1LC3B-208ENST00000570189 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
MAP1LC3B-208ENST00000570189 C8orf37Q96NL8 207 aa24.87■■□□□ 1.57
MAP1LC3B-208ENST00000570189 PHF8Q9UPP1 1060 aa24.87■■□□□ 1.57
MAP1LC3B-208ENST00000570189 TRAK1Q9UPV9 953 aa24.87■■□□□ 1.57
MAP1LC3B-208ENST00000570189 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
MAP1LC3B-208ENST00000570189 RXRBP28702 533 aa24.86■■□□□ 1.57
MAP1LC3B-208ENST00000570189 FNBP4Q8N3X1 1017 aaPredicted RBP24.85■■□□□ 1.57
MAP1LC3B-208ENST00000570189 SBNO1A3KN83 1393 aa24.84■■□□□ 1.57
MAP1LC3B-208ENST00000570189 SAFB2Q14151 953 aaKnown RBP eCLIP24.84■■□□□ 1.57
MAP1LC3B-208ENST00000570189 TNS3Q68CZ2 1445 aa24.84■■□□□ 1.57
MAP1LC3B-208ENST00000570189 ITSN1Q15811 1721 aa24.83■■□□□ 1.57
MAP1LC3B-208ENST00000570189 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.83■■□□□ 1.57
MAP1LC3B-208ENST00000570189 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
MAP1LC3B-208ENST00000570189 ADAMTS2O95450 1211 aa24.82■■□□□ 1.56
MAP1LC3B-208ENST00000570189 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
MAP1LC3B-208ENST00000570189 KRT28Q7Z3Y7 464 aa24.82■■□□□ 1.56
MAP1LC3B-208ENST00000570189 NGLY1Q96IV0 654 aa24.82■■□□□ 1.56
MAP1LC3B-208ENST00000570189 ABCA3Q99758 1704 aa24.81■■□□□ 1.56
MAP1LC3B-208ENST00000570189 WASLO00401 505 aaPredicted RBP24.8■■□□□ 1.56
MAP1LC3B-208ENST00000570189 RBM6P78332 1123 aaKnown RBP24.8■■□□□ 1.56
MAP1LC3B-208ENST00000570189 PSME1Q06323 249 aa24.8■■□□□ 1.56
MAP1LC3B-208ENST00000570189 QTRT2Q9H974 415 aaKnown RBP24.79■■□□□ 1.56
MAP1LC3B-208ENST00000570189 ALS2Q96Q42 1657 aa24.78■■□□□ 1.56
MAP1LC3B-208ENST00000570189 ATRNO75882 1429 aa24.78■■□□□ 1.56
MAP1LC3B-208ENST00000570189 MINK1Q8N4C8 1332 aaPredicted RBP24.77■■□□□ 1.56
MAP1LC3B-208ENST00000570189 PRR36Q9H6K5 1346 aa24.77■■□□□ 1.56
MAP1LC3B-208ENST00000570189 ARHGEF10O15013 1369 aa24.77■■□□□ 1.56
MAP1LC3B-208ENST00000570189 ATP7BP35670 1465 aa24.77■■□□□ 1.56
MAP1LC3B-208ENST00000570189 BCL9LQ86UU0 1499 aa24.77■■□□□ 1.56
MAP1LC3B-208ENST00000570189 RGS12O14924 1447 aa24.76■■□□□ 1.55
MAP1LC3B-208ENST00000570189 TOPAZ1Q8N9V7 1692 aa24.75■■□□□ 1.55
MAP1LC3B-208ENST00000570189 HIRIP3Q9BW71 556 aaPredicted RBP24.75■■□□□ 1.55
MAP1LC3B-208ENST00000570189 USP21Q9UK80 565 aa24.75■■□□□ 1.55
MAP1LC3B-208ENST00000570189 TRPC5Q9UL62 973 aaPredicted RBP24.75■■□□□ 1.55
MAP1LC3B-208ENST00000570189 SLIT2O94813 1529 aa24.75■■□□□ 1.55
MAP1LC3B-208ENST00000570189 NWD2Q9ULI1 1742 aa24.73■■□□□ 1.55
MAP1LC3B-208ENST00000570189 TRPM1Q7Z4N2 1603 aa24.72■■□□□ 1.55
MAP1LC3B-208ENST00000570189 CRYBG1Q9Y4K1 1723 aa24.71■■□□□ 1.55
MAP1LC3B-208ENST00000570189 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.54
MAP1LC3B-208ENST00000570189 PMFBP1Q8TBY8 1022 aa24.7■■□□□ 1.54
MAP1LC3B-208ENST00000570189 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
MAP1LC3B-208ENST00000570189 L3MBTL2Q969R5 705 aa24.69■■□□□ 1.54
MAP1LC3B-208ENST00000570189 PLCH1Q4KWH8 1693 aa24.69■■□□□ 1.54
MAP1LC3B-208ENST00000570189 QRICH2Q9H0J4 1663 aa24.67■■□□□ 1.54
MAP1LC3B-208ENST00000570189 UPF1Q92900 1129 aaKnown RBP eCLIP24.67■■□□□ 1.543e-8■■□□□ 12.4
MAP1LC3B-208ENST00000570189 NUDT16Q96DE0 195 aaKnown RBP24.66■■□□□ 1.54
MAP1LC3B-208ENST00000570189 POLR3AO14802 1390 aaPredicted RBP24.66■■□□□ 1.54
MAP1LC3B-208ENST00000570189 UNC5CLQ8IV45 518 aa24.64■■□□□ 1.54
MAP1LC3B-208ENST00000570189 CDK19Q9BWU1 502 aa24.64■■□□□ 1.54
MAP1LC3B-208ENST00000570189 SIN3AQ96ST3 1273 aa24.63■■□□□ 1.53
MAP1LC3B-208ENST00000570189 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
MAP1LC3B-208ENST00000570189 GLI3P10071 1580 aa24.62■■□□□ 1.53
MAP1LC3B-208ENST00000570189 NGDNQ8NEJ9 315 aaKnown RBP24.61■■□□□ 1.53
MAP1LC3B-208ENST00000570189 CCDC61Q9Y6R9 512 aa24.61■■□□□ 1.53
MAP1LC3B-208ENST00000570189 COL14A1Q05707 1796 aaKnown RBP24.61■■□□□ 1.53
MAP1LC3B-208ENST00000570189 NRAPQ86VF7 1730 aa24.61■■□□□ 1.53
MAP1LC3B-208ENST00000570189 PLEKHG3A1L390 1219 aa24.6■■□□□ 1.53
MAP1LC3B-208ENST00000570189 GJD4Q96KN9 370 aaPredicted RBP24.6■■□□□ 1.53
MAP1LC3B-208ENST00000570189 RALGAPBQ86X10 1494 aa24.59■■□□□ 1.53
MAP1LC3B-208ENST00000570189 CABLES1Q8TDN4 633 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms