RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 SHPRHQ149N8 1683 aa29.46■■■□□ 2.31
ABCA3-206ENST00000569062 DHX57Q6P158 1386 aaKnown RBP29.44■■■□□ 2.3
ABCA3-206ENST00000569062 ORAI2Q96SN7 254 aa29.43■■■□□ 2.3
ABCA3-206ENST00000569062 RGS17Q9UGC6 210 aaPredicted RBP29.43■■■□□ 2.3
ABCA3-206ENST00000569062 ADGRB1O14514 1584 aa29.4■■■□□ 2.3
ABCA3-206ENST00000569062 SOCS7O14512 581 aa29.4■■■□□ 2.3
ABCA3-206ENST00000569062 LRP6O75581 1613 aa29.38■■■□□ 2.29
ABCA3-206ENST00000569062 SIRT1Q96EB6 747 aa29.38■■■□□ 2.29
ABCA3-206ENST00000569062 SPATA31A6Q5VVP1 1343 aa29.38■■■□□ 2.29
ABCA3-206ENST00000569062 STAC3Q96MF2 364 aa29.36■■■□□ 2.29
ABCA3-206ENST00000569062 FMN2Q9NZ56 1722 aa29.36■■■□□ 2.29
ABCA3-206ENST00000569062 NUTM2FA1L443 756 aa29.34■■■□□ 2.29
ABCA3-206ENST00000569062 LRRC59Q96AG4 307 aaKnown RBP29.34■■■□□ 2.29
ABCA3-206ENST00000569062 DLC1Q96QB1 1528 aa29.34■■■□□ 2.29
ABCA3-206ENST00000569062 PRAM1Q96QH2 718 aa29.33■■■□□ 2.29
ABCA3-206ENST00000569062 ESCO1Q5FWF5 840 aa29.32■■■□□ 2.28
ABCA3-206ENST00000569062 SAFB2Q14151 953 aaKnown RBP eCLIP29.31■■■□□ 2.28
ABCA3-206ENST00000569062 TRAK1Q9UPV9 953 aa29.3■■■□□ 2.28
ABCA3-206ENST00000569062 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
ABCA3-206ENST00000569062 SOS2Q07890 1332 aaPredicted RBP29.29■■■□□ 2.28
ABCA3-206ENST00000569062 PNPLA6Q8IY17 1366 aa29.27■■■□□ 2.28
ABCA3-206ENST00000569062 NUTM2BA6NNL0 878 aaPredicted RBP29.27■■■□□ 2.28
ABCA3-206ENST00000569062 NUTM2EB1AL46 878 aaPredicted RBP29.27■■■□□ 2.28
ABCA3-206ENST00000569062 POTEAQ6S8J7 498 aa29.27■■■□□ 2.28
ABCA3-206ENST00000569062 NUTM2AQ8IVF1 878 aaPredicted RBP29.27■■■□□ 2.28
ABCA3-206ENST00000569062 POGKQ9P215 609 aa29.27■■■□□ 2.28
ABCA3-206ENST00000569062 MEX3CQ5U5Q3 659 aaKnown RBP29.26■■■□□ 2.27
ABCA3-206ENST00000569062 ARHGEF28Q8N1W1 1705 aaKnown RBP29.23■■■□□ 2.27
ABCA3-206ENST00000569062 FOXO3O43524 673 aa29.22■■■□□ 2.27
ABCA3-206ENST00000569062 SIN3AQ96ST3 1273 aa29.22■■■□□ 2.27
ABCA3-206ENST00000569062 KIAA1210Q9ULL0 1709 aa29.22■■■□□ 2.27
ABCA3-206ENST00000569062 PXDNQ92626 1479 aa29.22■■■□□ 2.27
ABCA3-206ENST00000569062 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
ABCA3-206ENST00000569062 NPHP3Q7Z494 1330 aa29.21■■■□□ 2.27
ABCA3-206ENST00000569062 KIF1AQ12756 1690 aa29.21■■■□□ 2.27
ABCA3-206ENST00000569062 XPCQ01831 940 aaPredicted RBP29.2■■■□□ 2.26
ABCA3-206ENST00000569062 HIRIP3Q9BW71 556 aaPredicted RBP29.18■■■□□ 2.26
ABCA3-206ENST00000569062 USP32Q8NFA0 1604 aa29.18■■■□□ 2.26
ABCA3-206ENST00000569062 MINK1Q8N4C8 1332 aaPredicted RBP29.17■■■□□ 2.26
ABCA3-206ENST00000569062 TRIM26Q12899 539 aaPredicted RBP29.16■■■□□ 2.26
ABCA3-206ENST00000569062 COL22A1Q8NFW1 1626 aaPredicted RBP29.16■■■□□ 2.26
ABCA3-206ENST00000569062 NEUROD1Q13562 356 aa29.14■■■□□ 2.26
ABCA3-206ENST00000569062 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.26
ABCA3-206ENST00000569062 NBPF1Q3BBV0 1214 aa29.13■■■□□ 2.25
ABCA3-206ENST00000569062 PHF8Q9UPP1 1060 aa29.12■■■□□ 2.25
ABCA3-206ENST00000569062 ZNF772Q68DY9 489 aaPredicted RBP29.11■■■□□ 2.25
ABCA3-206ENST00000569062 ANKARQ7Z5J8 1434 aa29.1■■■□□ 2.25
ABCA3-206ENST00000569062 ADAMTS2O95450 1211 aa29.09■■■□□ 2.25
ABCA3-206ENST00000569062 C8orf37Q96NL8 207 aa29.09■■■□□ 2.25
ABCA3-206ENST00000569062 WASLO00401 505 aaPredicted RBP29.08■■■□□ 2.25
ABCA3-206ENST00000569062 KRT28Q7Z3Y7 464 aa29.08■■■□□ 2.25
ABCA3-206ENST00000569062 AFF2P51816 1311 aa29.08■■■□□ 2.25
ABCA3-206ENST00000569062 TULP4Q9NRJ4 1543 aa29.07■■■□□ 2.24
ABCA3-206ENST00000569062 PRR36Q9H6K5 1346 aa29.06■■■□□ 2.24
ABCA3-206ENST00000569062 PMFBP1Q8TBY8 1022 aa29.06■■■□□ 2.24
ABCA3-206ENST00000569062 SPATA31A3Q5VYP0 1347 aa29.04■■■□□ 2.24
ABCA3-206ENST00000569062 TRPM1Q7Z4N2 1603 aa29.03■■■□□ 2.24
ABCA3-206ENST00000569062 EIF3AQ14152 1382 aaKnown RBP29.02■■■□□ 2.24
ABCA3-206ENST00000569062 MARF1Q9Y4F3 1742 aaKnown RBP29.02■■■□□ 2.24
ABCA3-206ENST00000569062 NGLY1Q96IV0 654 aa29■■■□□ 2.23
ABCA3-206ENST00000569062 PSME1Q06323 249 aa28.99■■■□□ 2.23
ABCA3-206ENST00000569062 ITSN1Q15811 1721 aa28.98■■■□□ 2.23
ABCA3-206ENST00000569062 TNS3Q68CZ2 1445 aa28.98■■■□□ 2.23
ABCA3-206ENST00000569062 ATP7BP35670 1465 aa28.97■■■□□ 2.23
ABCA3-206ENST00000569062 CDK19Q9BWU1 502 aa28.96■■■□□ 2.23
ABCA3-206ENST00000569062 TRPM3Q9HCF6 1732 aaPredicted RBP28.96■■■□□ 2.23
ABCA3-206ENST00000569062 SBNO1A3KN83 1393 aa28.96■■■□□ 2.23
ABCA3-206ENST00000569062 QRICH2Q9H0J4 1663 aa28.94■■■□□ 2.22
ABCA3-206ENST00000569062 RXRBP28702 533 aa28.94■■■□□ 2.22
ABCA3-206ENST00000569062 NUDT16Q96DE0 195 aaKnown RBP28.94■■■□□ 2.22
ABCA3-206ENST00000569062 QTRT2Q9H974 415 aaKnown RBP28.93■■■□□ 2.22
ABCA3-206ENST00000569062 CENPJQ9HC77 1338 aaPredicted RBP28.93■■■□□ 2.22
ABCA3-206ENST00000569062 TOPAZ1Q8N9V7 1692 aa28.92■■■□□ 2.22
ABCA3-206ENST00000569062 NBPF8Q3BBV2 869 aa28.91■■■□□ 2.22
ABCA3-206ENST00000569062 LMOD2Q6P5Q4 547 aa28.91■■■□□ 2.22
ABCA3-206ENST00000569062 FNBP4Q8N3X1 1017 aaPredicted RBP28.91■■■□□ 2.22
ABCA3-206ENST00000569062 USP21Q9UK80 565 aa28.91■■■□□ 2.22
ABCA3-206ENST00000569062 ABCA3Q99758 1704 aa28.91■■■□□ 2.22
ABCA3-206ENST00000569062 PLEKHG5O94827 1062 aa28.9■■■□□ 2.22
ABCA3-206ENST00000569062 ALS2Q96Q42 1657 aa28.89■■■□□ 2.22
ABCA3-206ENST00000569062 GPRASP1Q5JY77 1395 aa28.89■■■□□ 2.22
ABCA3-206ENST00000569062 NGDNQ8NEJ9 315 aaKnown RBP28.89■■■□□ 2.22
ABCA3-206ENST00000569062 CABLES1Q8TDN4 633 aa28.89■■■□□ 2.22
ABCA3-206ENST00000569062 ROCK2O75116 1388 aaKnown RBP28.88■■■□□ 2.21
ABCA3-206ENST00000569062 ARHGEF10O15013 1369 aa28.88■■■□□ 2.21
ABCA3-206ENST00000569062 CDK12Q9NYV4 1490 aaPredicted RBP28.85■■■□□ 2.21
ABCA3-206ENST00000569062 RBM6P78332 1123 aaKnown RBP28.85■■■□□ 2.21
ABCA3-206ENST00000569062 TONSLQ96HA7 1378 aa28.85■■■□□ 2.21
ABCA3-206ENST00000569062 BCL9LQ86UU0 1499 aa28.85■■■□□ 2.21
ABCA3-206ENST00000569062 HAP1P54257 671 aaPredicted RBP28.83■■■□□ 2.21
ABCA3-206ENST00000569062 CCDC61Q9Y6R9 512 aa28.83■■■□□ 2.21
ABCA3-206ENST00000569062 SRPK2P78362 688 aaKnown RBP28.82■■■□□ 2.2
ABCA3-206ENST00000569062 TRPC5Q9UL62 973 aaPredicted RBP28.82■■■□□ 2.2
ABCA3-206ENST00000569062 ATRNO75882 1429 aa28.82■■■□□ 2.2
ABCA3-206ENST00000569062 RGS12O14924 1447 aa28.81■■■□□ 2.2
ABCA3-206ENST00000569062 CABP2Q9NPB3 220 aa28.81■■■□□ 2.2
ABCA3-206ENST00000569062 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.8■■■□□ 2.2
ABCA3-206ENST00000569062 PAK3O75914 559 aaPredicted RBP28.8■■■□□ 2.2
ABCA3-206ENST00000569062 SLIT2O94813 1529 aa28.79■■■□□ 2.2
ABCA3-206ENST00000569062 POLR3AO14802 1390 aaPredicted RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms