RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 ATAD2Q6PL18 1390 aa28.13■■■□□ 2.09
ATP6V0C-204ENST00000568562 SLC4A1APQ9BWU0 796 aaKnown RBP28.13■■■□□ 2.09
ATP6V0C-204ENST00000568562 TRPC5Q9UL62 973 aaPredicted RBP28.13■■■□□ 2.09
ATP6V0C-204ENST00000568562 MYOM2P54296 1465 aa28.11■■■□□ 2.09
ATP6V0C-204ENST00000568562 ATRNO75882 1429 aa28.1■■■□□ 2.09
ATP6V0C-204ENST00000568562 PXDNQ92626 1479 aa28.1■■■□□ 2.09
ATP6V0C-204ENST00000568562 IFT172Q9UG01 1749 aa28.09■■■□□ 2.09
ATP6V0C-204ENST00000568562 FNBP4Q8N3X1 1017 aaPredicted RBP28.09■■■□□ 2.09
ATP6V0C-204ENST00000568562 ESCO1Q5FWF5 840 aa28.08■■■□□ 2.09
ATP6V0C-204ENST00000568562 NPHP3Q7Z494 1330 aa28.08■■■□□ 2.09
ATP6V0C-204ENST00000568562 KNDC1Q76NI1 1749 aa28.07■■■□□ 2.08
ATP6V0C-204ENST00000568562 FOXD1Q16676 465 aa28.06■■■□□ 2.08
ATP6V0C-204ENST00000568562 XPCQ01831 940 aaPredicted RBP28.05■■■□□ 2.08
ATP6V0C-204ENST00000568562 ADGRF5Q8IZF2 1346 aa28.04■■■□□ 2.08
ATP6V0C-204ENST00000568562 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.02■■■□□ 2.08
ATP6V0C-204ENST00000568562 FMN2Q9NZ56 1722 aa28.02■■■□□ 2.08
ATP6V0C-204ENST00000568562 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
ATP6V0C-204ENST00000568562 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
ATP6V0C-204ENST00000568562 TECPR2O15040 1411 aa28.01■■■□□ 2.08
ATP6V0C-204ENST00000568562 FOXO3O43524 673 aa28.01■■■□□ 2.07
ATP6V0C-204ENST00000568562 STK26Q9P289 416 aa28.01■■■□□ 2.07
ATP6V0C-204ENST00000568562 CCDC144AA2RUR9 1427 aa28.01■■■□□ 2.07
ATP6V0C-204ENST00000568562 WAPLQ7Z5K2 1190 aa28■■■□□ 2.07
ATP6V0C-204ENST00000568562 KIF1AQ12756 1690 aa27.99■■■□□ 2.07
ATP6V0C-204ENST00000568562 EP400Q96L91 3159 aa27.99■■■□□ 2.07
ATP6V0C-204ENST00000568562 RGL3Q3MIN7 710 aa27.98■■■□□ 2.07
ATP6V0C-204ENST00000568562 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
ATP6V0C-204ENST00000568562 PLEKHH1Q9ULM0 1364 aa27.98■■■□□ 2.07
ATP6V0C-204ENST00000568562 SPATA31E1Q6ZUB1 1445 aa27.97■■■□□ 2.07
ATP6V0C-204ENST00000568562 RGPD8O14715 1765 aaPredicted RBP27.96■■■□□ 2.07
ATP6V0C-204ENST00000568562 ANKRD30BQ9BXX2 1392 aa27.94■■■□□ 2.06
ATP6V0C-204ENST00000568562 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
ATP6V0C-204ENST00000568562 GLI3P10071 1580 aa27.93■■■□□ 2.06
ATP6V0C-204ENST00000568562 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
ATP6V0C-204ENST00000568562 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
ATP6V0C-204ENST00000568562 ABCC11Q96J66 1382 aa27.92■■■□□ 2.06
ATP6V0C-204ENST00000568562 GJD4Q96KN9 370 aaPredicted RBP27.92■■■□□ 2.06
ATP6V0C-204ENST00000568562 BRWD3Q6RI45 1802 aa27.92■■■□□ 2.06
ATP6V0C-204ENST00000568562 SRCAPQ6ZRS2 3230 aa27.9■■■□□ 2.06
ATP6V0C-204ENST00000568562 SLIT2O94813 1529 aa27.89■■■□□ 2.06
ATP6V0C-204ENST00000568562 ZRANB1Q9UGI0 708 aa27.89■■■□□ 2.06
ATP6V0C-204ENST00000568562 YTHDC2Q9H6S0 1430 aaKnown RBP27.89■■■□□ 2.06
ATP6V0C-204ENST00000568562 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.05
ATP6V0C-204ENST00000568562 SPATA31A3Q5VYP0 1347 aa27.88■■■□□ 2.05
ATP6V0C-204ENST00000568562 ABCA3Q99758 1704 aa27.87■■■□□ 2.05
ATP6V0C-204ENST00000568562 PLCH1Q4KWH8 1693 aa27.86■■■□□ 2.05
ATP6V0C-204ENST00000568562 UNC5CLQ8IV45 518 aa27.85■■■□□ 2.05
ATP6V0C-204ENST00000568562 MPHOSPH9Q99550 1183 aa27.85■■■□□ 2.05
ATP6V0C-204ENST00000568562 CCDC125Q86Z20 511 aa27.84■■■□□ 2.05
ATP6V0C-204ENST00000568562 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
ATP6V0C-204ENST00000568562 TNS3Q68CZ2 1445 aa27.82■■■□□ 2.04
ATP6V0C-204ENST00000568562 NWD2Q9ULI1 1742 aa27.81■■■□□ 2.04
ATP6V0C-204ENST00000568562 PLEKHG5O94827 1062 aa27.79■■■□□ 2.04
ATP6V0C-204ENST00000568562 BLMP54132 1417 aaPredicted RBP27.78■■■□□ 2.04
ATP6V0C-204ENST00000568562 HAP1P54257 671 aaPredicted RBP27.78■■■□□ 2.04
ATP6V0C-204ENST00000568562 PHF8Q9UPP1 1060 aa27.77■■■□□ 2.04
ATP6V0C-204ENST00000568562 NRXN1Q9ULB1 1477 aa27.76■■■□□ 2.04
ATP6V0C-204ENST00000568562 CABLES1Q8TDN4 633 aa27.76■■■□□ 2.03
ATP6V0C-204ENST00000568562 SIRT1Q96EB6 747 aa27.74■■■□□ 2.03
ATP6V0C-204ENST00000568562 C14orf93Q9H972 538 aaKnown RBP27.74■■■□□ 2.03
ATP6V0C-204ENST00000568562 SAFB2Q14151 953 aaKnown RBP eCLIP27.73■■■□□ 2.03
ATP6V0C-204ENST00000568562 CFAP70Q5T0N1 1121 aa27.73■■■□□ 2.03
ATP6V0C-204ENST00000568562 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
ATP6V0C-204ENST00000568562 PSME1Q06323 249 aa27.72■■■□□ 2.03
ATP6V0C-204ENST00000568562 LMOD2Q6P5Q4 547 aa27.71■■■□□ 2.03
ATP6V0C-204ENST00000568562 DEFB132Q7Z7B7 95 aa27.71■■■□□ 2.03
ATP6V0C-204ENST00000568562 SEPT12Q8IYM1 358 aa27.71■■■□□ 2.03
ATP6V0C-204ENST00000568562 SBNO1A3KN83 1393 aa27.71■■■□□ 2.03
ATP6V0C-204ENST00000568562 NRAPQ86VF7 1730 aa27.7■■■□□ 2.03
ATP6V0C-204ENST00000568562 VPS72Q15906 364 aa27.7■■■□□ 2.02
ATP6V0C-204ENST00000568562 PRAM1Q96QH2 718 aa27.7■■■□□ 2.02
ATP6V0C-204ENST00000568562 CCDC9Q9Y3X0 531 aaKnown RBP27.7■■■□□ 2.02
ATP6V0C-204ENST00000568562 TRPM3Q9HCF6 1732 aaPredicted RBP27.69■■■□□ 2.02
ATP6V0C-204ENST00000568562 ADGRB2O60241 1585 aa27.69■■■□□ 2.02
ATP6V0C-204ENST00000568562 DLC1Q96QB1 1528 aa27.68■■■□□ 2.02
ATP6V0C-204ENST00000568562 ARHGEF10O15013 1369 aa27.68■■■□□ 2.02
ATP6V0C-204ENST00000568562 SF3B2Q13435 895 aaKnown RBP27.66■■■□□ 2.02
ATP6V0C-204ENST00000568562 PMFBP1Q8TBY8 1022 aa27.66■■■□□ 2.02
ATP6V0C-204ENST00000568562 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
ATP6V0C-204ENST00000568562 ALS2Q96Q42 1657 aa27.65■■■□□ 2.02
ATP6V0C-204ENST00000568562 POGKQ9P215 609 aa27.63■■■□□ 2.01
ATP6V0C-204ENST00000568562 ADGRB1O14514 1584 aa27.62■■■□□ 2.01
ATP6V0C-204ENST00000568562 KRT27Q7Z3Y8 459 aa27.62■■■□□ 2.01
ATP6V0C-204ENST00000568562 COL14A1Q05707 1796 aaKnown RBP27.6■■■□□ 2.01
ATP6V0C-204ENST00000568562 A0A0G2JS52 829 aa27.6■■■□□ 2.01
ATP6V0C-204ENST00000568562 FAM83GA6ND36 823 aa27.6■■■□□ 2.01
ATP6V0C-204ENST00000568562 MYT1Q01538 1121 aa27.6■■■□□ 2.01
ATP6V0C-204ENST00000568562 CRYBG1Q9Y4K1 1723 aa27.59■■■□□ 2.01
ATP6V0C-204ENST00000568562 ONECUT3O60422 494 aaPredicted RBP27.59■■■□□ 2.01
ATP6V0C-204ENST00000568562 LRP5O75197 1615 aa27.59■■■□□ 2.01
ATP6V0C-204ENST00000568562 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
ATP6V0C-204ENST00000568562 TRAK1Q9UPV9 953 aa27.56■■■□□ 2
ATP6V0C-204ENST00000568562 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
ATP6V0C-204ENST00000568562 RGPD1P0DJD0 1748 aa27.55■■■□□ 2
ATP6V0C-204ENST00000568562 FAM98CQ17RN3 349 aaKnown RBP27.55■■■□□ 2
ATP6V0C-204ENST00000568562 MINK1Q8N4C8 1332 aaPredicted RBP27.54■■■□□ 2
ATP6V0C-204ENST00000568562 BTG4Q9NY30 223 aa27.54■■■□□ 2
ATP6V0C-204ENST00000568562 GPRASP1Q5JY77 1395 aa27.53■■■□□ 2
ATP6V0C-204ENST00000568562 PRR36Q9H6K5 1346 aa27.53■■■□□ 2
ATP6V0C-204ENST00000568562 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms