RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CCDC136Q96JN2 1154 aa23.55■■□□□ 1.36
CMTM3-214ENST00000567572 EVC2Q86UK5 1308 aa23.54■■□□□ 1.36
CMTM3-214ENST00000567572 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.54■■□□□ 1.36
CMTM3-214ENST00000567572 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
CMTM3-214ENST00000567572 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
CMTM3-214ENST00000567572 DLC1Q96QB1 1528 aa23.53■■□□□ 1.36
CMTM3-214ENST00000567572 STK26Q9P289 416 aa23.53■■□□□ 1.36
CMTM3-214ENST00000567572 CARD14Q9BXL6 1004 aa23.53■■□□□ 1.36
CMTM3-214ENST00000567572 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
CMTM3-214ENST00000567572 TMEM2Q9UHN6 1383 aa23.5■■□□□ 1.35
CMTM3-214ENST00000567572 USP32Q8NFA0 1604 aa23.49■■□□□ 1.35
CMTM3-214ENST00000567572 PPP2R1AP30153 589 aa23.48■■□□□ 1.35
CMTM3-214ENST00000567572 PRAM1Q96QH2 718 aa23.48■■□□□ 1.35
CMTM3-214ENST00000567572 SLC12A5Q9H2X9 1139 aa23.47■■□□□ 1.35
CMTM3-214ENST00000567572 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
CMTM3-214ENST00000567572 SAFB2Q14151 953 aaKnown RBP eCLIP23.46■■□□□ 1.35
CMTM3-214ENST00000567572 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
CMTM3-214ENST00000567572 NSD3Q9BZ95 1437 aa23.46■■□□□ 1.35
CMTM3-214ENST00000567572 ABCC11Q96J66 1382 aa23.45■■□□□ 1.34
CMTM3-214ENST00000567572 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-214ENST00000567572 NINLQ9Y2I6 1382 aa23.44■■□□□ 1.34
CMTM3-214ENST00000567572 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
CMTM3-214ENST00000567572 POGKQ9P215 609 aa23.43■■□□□ 1.34
CMTM3-214ENST00000567572 ANKRD36BQ8N2N9 1353 aa23.43■■□□□ 1.34
CMTM3-214ENST00000567572 MSH5O43196 834 aa23.42■■□□□ 1.34
CMTM3-214ENST00000567572 CABP2Q9NPB3 220 aa23.42■■□□□ 1.34
CMTM3-214ENST00000567572 METP08581 1390 aa23.42■■□□□ 1.34
CMTM3-214ENST00000567572 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
CMTM3-214ENST00000567572 ATAD2Q6PL18 1390 aa23.41■■□□□ 1.34
CMTM3-214ENST00000567572 TECPR2O15040 1411 aa23.4■■□□□ 1.34
CMTM3-214ENST00000567572 SLIT1O75093 1534 aa23.4■■□□□ 1.34
CMTM3-214ENST00000567572 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.33
CMTM3-214ENST00000567572 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
CMTM3-214ENST00000567572 PLEKHG1Q9ULL1 1385 aa23.38■■□□□ 1.33
CMTM3-214ENST00000567572 CPS1P31327 1500 aa23.38■■□□□ 1.33
CMTM3-214ENST00000567572 ADAMTS13Q76LX8 1427 aa23.38■■□□□ 1.33
CMTM3-214ENST00000567572 SRPK2P78362 688 aaKnown RBP23.37■■□□□ 1.33
CMTM3-214ENST00000567572 PLEKHH1Q9ULM0 1364 aa23.37■■□□□ 1.33
CMTM3-214ENST00000567572 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
CMTM3-214ENST00000567572 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
CMTM3-214ENST00000567572 ADAMTS8Q9UP79 889 aa23.35■■□□□ 1.33
CMTM3-214ENST00000567572 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
CMTM3-214ENST00000567572 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
CMTM3-214ENST00000567572 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
CMTM3-214ENST00000567572 NSD2O96028 1365 aa23.34■■□□□ 1.33
CMTM3-214ENST00000567572 CD163L1Q9NR16 1453 aa23.34■■□□□ 1.33
CMTM3-214ENST00000567572 LTKP29376 864 aa23.33■■□□□ 1.33
CMTM3-214ENST00000567572 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
CMTM3-214ENST00000567572 SIRT1Q96EB6 747 aa23.33■■□□□ 1.33
CMTM3-214ENST00000567572 ZNF521Q96K83 1311 aa23.33■■□□□ 1.33
CMTM3-214ENST00000567572 MED14O60244 1454 aa23.33■■□□□ 1.33
CMTM3-214ENST00000567572 CDCA7LQ96GN5 454 aa23.33■■□□□ 1.32
CMTM3-214ENST00000567572 SENP3-EIF4A1A0A087X0R7 540 aa23.32■■□□□ 1.32
CMTM3-214ENST00000567572 CDK19Q9BWU1 502 aa23.32■■□□□ 1.32
CMTM3-214ENST00000567572 RIMS1Q86UR5 1692 aaKnown RBP23.32■■□□□ 1.32
CMTM3-214ENST00000567572 EXOC6Q8TAG9 804 aa23.31■■□□□ 1.32
CMTM3-214ENST00000567572 SALL2Q9Y467 1007 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-214ENST00000567572 TCERG1O14776 1098 aaKnown RBP23.3■■□□□ 1.32
CMTM3-214ENST00000567572 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
CMTM3-214ENST00000567572 TXNDC2Q86VQ3 553 aa23.29■■□□□ 1.32
CMTM3-214ENST00000567572 MORC1Q86VD1 984 aa23.28■■□□□ 1.32
CMTM3-214ENST00000567572 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
CMTM3-214ENST00000567572 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
CMTM3-214ENST00000567572 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
CMTM3-214ENST00000567572 TERF2IPQ9NYB0 399 aa23.27■■□□□ 1.32
CMTM3-214ENST00000567572 MS4A1P11836 297 aa23.26■■□□□ 1.31
CMTM3-214ENST00000567572 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
CMTM3-214ENST00000567572 ATP7BP35670 1465 aa23.26■■□□□ 1.31
CMTM3-214ENST00000567572 ANKRD26Q9UPS8 1709 aa23.25■■□□□ 1.31
CMTM3-214ENST00000567572 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
CMTM3-214ENST00000567572 THEMISQ8N1K5 641 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-214ENST00000567572 DIP2AQ14689 1571 aa23.24■■□□□ 1.31
CMTM3-214ENST00000567572 ROBO2Q9HCK4 1378 aa23.24■■□□□ 1.31
CMTM3-214ENST00000567572 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
CMTM3-214ENST00000567572 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
CMTM3-214ENST00000567572 WASLO00401 505 aaPredicted RBP23.23■■□□□ 1.31
CMTM3-214ENST00000567572 ANP32AP39687 249 aaKnown RBP23.23■■□□□ 1.31
CMTM3-214ENST00000567572 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
CMTM3-214ENST00000567572 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
CMTM3-214ENST00000567572 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
CMTM3-214ENST00000567572 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.21■■□□□ 1.31
CMTM3-214ENST00000567572 PTPRUQ92729 1446 aa23.21■■□□□ 1.31
CMTM3-214ENST00000567572 HDGFL2Q7Z4V5 671 aaPredicted RBP23.2■■□□□ 1.3
CMTM3-214ENST00000567572 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
CMTM3-214ENST00000567572 KIF20BQ96Q89 1820 aa23.19■■□□□ 1.3
CMTM3-214ENST00000567572 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
CMTM3-214ENST00000567572 TBX22Q9Y458 520 aa23.19■■□□□ 1.3
CMTM3-214ENST00000567572 SLFN5Q08AF3 891 aa23.18■■□□□ 1.3
CMTM3-214ENST00000567572 NOP58Q9Y2X3 529 aaKnown RBP23.18■■□□□ 1.3
CMTM3-214ENST00000567572 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
CMTM3-214ENST00000567572 TNNT2P45379 298 aaPredicted RBP23.17■■□□□ 1.3
CMTM3-214ENST00000567572 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
CMTM3-214ENST00000567572 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
CMTM3-214ENST00000567572 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
CMTM3-214ENST00000567572 NKTRP30414 1462 aaKnown RBP23.16■■□□□ 1.3
CMTM3-214ENST00000567572 CDC42BPGQ6DT37 1551 aa23.16■■□□□ 1.3
CMTM3-214ENST00000567572 FYB1O15117 783 aa23.16■■□□□ 1.3
CMTM3-214ENST00000567572 CRBNQ96SW2 442 aa23.15■■□□□ 1.3
CMTM3-214ENST00000567572 IPO9Q96P70 1041 aaKnown RBP23.14■■□□□ 1.3
CMTM3-214ENST00000567572 XRN1Q8IZH2 1706 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms