RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
CDH1-209ENST00000566510 GSE1Q14687 1217 aa18.33■□□□□ 0.53
CDH1-209ENST00000566510 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
CDH1-209ENST00000566510 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
CDH1-209ENST00000566510 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
CDH1-209ENST00000566510 CFAP53Q96M91 514 aa18.3■□□□□ 0.52
CDH1-209ENST00000566510 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
CDH1-209ENST00000566510 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
CDH1-209ENST00000566510 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
CDH1-209ENST00000566510 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDH1-209ENST00000566510 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
CDH1-209ENST00000566510 FRAT2O75474 233 aaPredicted RBP18.29■□□□□ 0.52
CDH1-209ENST00000566510 SEC24BO95487 1268 aa18.29■□□□□ 0.52
CDH1-209ENST00000566510 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
CDH1-209ENST00000566510 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
CDH1-209ENST00000566510 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
CDH1-209ENST00000566510 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDH1-209ENST00000566510 ASXL2Q76L83 1435 aa18.28■□□□□ 0.52
CDH1-209ENST00000566510 KIDINS220Q9ULH0 1771 aa18.28■□□□□ 0.52
CDH1-209ENST00000566510 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.52
CDH1-209ENST00000566510 RLBP1P12271 317 aa18.27■□□□□ 0.52
CDH1-209ENST00000566510 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
CDH1-209ENST00000566510 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
CDH1-209ENST00000566510 MYO3AQ8NEV4 1616 aa18.26■□□□□ 0.51
CDH1-209ENST00000566510 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
CDH1-209ENST00000566510 PCDHB15Q9Y5E8 787 aa18.25■□□□□ 0.51
CDH1-209ENST00000566510 SHPRHQ149N8 1683 aa18.25■□□□□ 0.51
CDH1-209ENST00000566510 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
CDH1-209ENST00000566510 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDH1-209ENST00000566510 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
CDH1-209ENST00000566510 NPATQ14207 1427 aa18.24■□□□□ 0.51
CDH1-209ENST00000566510 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
CDH1-209ENST00000566510 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
CDH1-209ENST00000566510 USP19O94966 1318 aa18.23■□□□□ 0.51
CDH1-209ENST00000566510 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
CDH1-209ENST00000566510 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
CDH1-209ENST00000566510 SETBP1Q9Y6X0 1596 aa18.22■□□□□ 0.51
CDH1-209ENST00000566510 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
CDH1-209ENST00000566510 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
CDH1-209ENST00000566510 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
CDH1-209ENST00000566510 STK26Q9P289 416 aa18.21■□□□□ 0.51
CDH1-209ENST00000566510 BECN1Q14457 450 aa18.21■□□□□ 0.51
CDH1-209ENST00000566510 FTSJ3Q8IY81 847 aaKnown RBP18.21■□□□□ 0.51
CDH1-209ENST00000566510 UPF2Q9HAU5 1272 aaKnown RBP18.21■□□□□ 0.51
CDH1-209ENST00000566510 VIRMAQ69YN4 1812 aaKnown RBP18.2■□□□□ 0.5
CDH1-209ENST00000566510 PPLO60437 1756 aa18.2■□□□□ 0.5
CDH1-209ENST00000566510 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
CDH1-209ENST00000566510 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
CDH1-209ENST00000566510 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
CDH1-209ENST00000566510 RWDD1Q9H446 243 aaPredicted RBP18.19■□□□□ 0.5
CDH1-209ENST00000566510 LMTK2Q8IWU2 1503 aa18.19■□□□□ 0.5
CDH1-209ENST00000566510 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
CDH1-209ENST00000566510 IQSEC2Q5JU85 1478 aa18.18■□□□□ 0.5
CDH1-209ENST00000566510 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
CDH1-209ENST00000566510 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
CDH1-209ENST00000566510 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
CDH1-209ENST00000566510 RPGRIP1LQ68CZ1 1315 aa18.18■□□□□ 0.5
CDH1-209ENST00000566510 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
CDH1-209ENST00000566510 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
CDH1-209ENST00000566510 AAMPQ13685 434 aa18.16■□□□□ 0.5
CDH1-209ENST00000566510 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
CDH1-209ENST00000566510 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
CDH1-209ENST00000566510 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
CDH1-209ENST00000566510 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
CDH1-209ENST00000566510 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
CDH1-209ENST00000566510 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
CDH1-209ENST00000566510 RAPGEF3O95398 923 aa18.14■□□□□ 0.49
CDH1-209ENST00000566510 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
CDH1-209ENST00000566510 GLI2P10070 1586 aa18.13■□□□□ 0.49
CDH1-209ENST00000566510 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
CDH1-209ENST00000566510 SPRYD3Q8NCJ5 442 aa18.12■□□□□ 0.49
CDH1-209ENST00000566510 POGZQ7Z3K3 1410 aa18.12■□□□□ 0.49
CDH1-209ENST00000566510 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
CDH1-209ENST00000566510 MINK1Q8N4C8 1332 aaPredicted RBP18.11■□□□□ 0.49
CDH1-209ENST00000566510 FRMPD1Q5SYB0 1578 aa18.1■□□□□ 0.49
CDH1-209ENST00000566510 NSD2O96028 1365 aa18.1■□□□□ 0.49
CDH1-209ENST00000566510 A0A1W2PP64 1363 aa18.1■□□□□ 0.49
CDH1-209ENST00000566510 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
CDH1-209ENST00000566510 IDI1Q13907 227 aa18.1■□□□□ 0.49
CDH1-209ENST00000566510 USP32Q8NFA0 1604 aa18.1■□□□□ 0.49
CDH1-209ENST00000566510 TBC1D32Q96NH3 1257 aa18.09■□□□□ 0.49
CDH1-209ENST00000566510 ABCC3O15438 1527 aa18.09■□□□□ 0.49
CDH1-209ENST00000566510 TRIM27P14373 513 aa18.09■□□□□ 0.49
CDH1-209ENST00000566510 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
CDH1-209ENST00000566510 POGKQ9P215 609 aa18.09■□□□□ 0.49
CDH1-209ENST00000566510 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.49
CDH1-209ENST00000566510 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.48
CDH1-209ENST00000566510 PUS7Q96PZ0 661 aaKnown RBP18.08■□□□□ 0.48
CDH1-209ENST00000566510 NLRP1Q9C000 1473 aa18.07■□□□□ 0.48
CDH1-209ENST00000566510 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
CDH1-209ENST00000566510 RIPK4P57078 832 aa18.07■□□□□ 0.48
CDH1-209ENST00000566510 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
CDH1-209ENST00000566510 MFAP1P55081 439 aaKnown RBP18.07■□□□□ 0.48
CDH1-209ENST00000566510 TBC1D2Q9BYX2 928 aa18.07■□□□□ 0.48
CDH1-209ENST00000566510 TRIM35Q9UPQ4 493 aa18.07■□□□□ 0.48
CDH1-209ENST00000566510 NOB1Q9ULX3 412 aaKnown RBP18.06■□□□□ 0.48
CDH1-209ENST00000566510 PRAM1Q96QH2 718 aa18.06■□□□□ 0.48
CDH1-209ENST00000566510 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
CDH1-209ENST00000566510 TERF2IPQ9NYB0 399 aa18.06■□□□□ 0.48
CDH1-209ENST00000566510 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms