RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
BBS4-210ENST00000566400 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
BBS4-210ENST00000566400 CENPQQ7L2Z9 268 aaPredicted RBP12.17□□□□□ -0.46
BBS4-210ENST00000566400 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
BBS4-210ENST00000566400 CARD14Q9BXL6 1004 aa12.17□□□□□ -0.46
BBS4-210ENST00000566400 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
BBS4-210ENST00000566400 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
BBS4-210ENST00000566400 NEXMIFQ5QGS0 1516 aa12.15□□□□□ -0.46
BBS4-210ENST00000566400 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
BBS4-210ENST00000566400 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.46
BBS4-210ENST00000566400 RICTORQ6R327 1708 aa12.15□□□□□ -0.46
BBS4-210ENST00000566400 AAMPQ13685 434 aa12.15□□□□□ -0.46
BBS4-210ENST00000566400 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
BBS4-210ENST00000566400 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
BBS4-210ENST00000566400 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
BBS4-210ENST00000566400 APAF1O14727 1248 aa12.13□□□□□ -0.47
BBS4-210ENST00000566400 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
BBS4-210ENST00000566400 ARHGEF28Q8N1W1 1705 aaKnown RBP12.13□□□□□ -0.47
BBS4-210ENST00000566400 PLIN1O60240 522 aa12.12□□□□□ -0.47
BBS4-210ENST00000566400 PDE4AP27815 886 aa12.12□□□□□ -0.47
BBS4-210ENST00000566400 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
BBS4-210ENST00000566400 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
BBS4-210ENST00000566400 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
BBS4-210ENST00000566400 CCDC27Q2M243 656 aa12.11□□□□□ -0.47
BBS4-210ENST00000566400 DDRGK1Q96HY6 314 aa12.11□□□□□ -0.47
BBS4-210ENST00000566400 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
BBS4-210ENST00000566400 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
BBS4-210ENST00000566400 ADAMTSL3P82987 1691 aa12.1□□□□□ -0.47
BBS4-210ENST00000566400 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
BBS4-210ENST00000566400 REREQ9P2R6 1566 aa12.1□□□□□ -0.47
BBS4-210ENST00000566400 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
BBS4-210ENST00000566400 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
BBS4-210ENST00000566400 SLC12A5Q9H2X9 1139 aa12.09□□□□□ -0.47
BBS4-210ENST00000566400 PREX1Q8TCU6 1659 aa12.09□□□□□ -0.47
BBS4-210ENST00000566400 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
BBS4-210ENST00000566400 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
BBS4-210ENST00000566400 MED14O60244 1454 aa12.08□□□□□ -0.48
BBS4-210ENST00000566400 TULP4Q9NRJ4 1543 aa12.08□□□□□ -0.48
BBS4-210ENST00000566400 IDI1Q13907 227 aa12.08□□□□□ -0.48
BBS4-210ENST00000566400 TMEM132EQ6IEE7 984 aa12.08□□□□□ -0.48
BBS4-210ENST00000566400 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
BBS4-210ENST00000566400 IQSEC2Q5JU85 1478 aa12.07□□□□□ -0.48
BBS4-210ENST00000566400 TMEM131LA2VDJ0 1609 aa12.07□□□□□ -0.48
BBS4-210ENST00000566400 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
BBS4-210ENST00000566400 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
BBS4-210ENST00000566400 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
BBS4-210ENST00000566400 AGLP35573 1532 aa12.07□□□□□ -0.48
BBS4-210ENST00000566400 ABCC11Q96J66 1382 aa12.06□□□□□ -0.48
BBS4-210ENST00000566400 CFAP65Q6ZU64 1925 aaKnown RBP12.06□□□□□ -0.48
BBS4-210ENST00000566400 CLTCQ00610 1675 aaKnown RBP12.06□□□□□ -0.48
BBS4-210ENST00000566400 MYH16Q9H6N6 1097 aa12.06□□□□□ -0.48
BBS4-210ENST00000566400 MTHFSP49914 203 aa12.05□□□□□ -0.48
BBS4-210ENST00000566400 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
BBS4-210ENST00000566400 YEATS2Q9ULM3 1422 aa12.05□□□□□ -0.48
BBS4-210ENST00000566400 CANXP27824 592 aaKnown RBP12.04□□□□□ -0.48
BBS4-210ENST00000566400 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
BBS4-210ENST00000566400 FAM161AQ3B820 660 aa12.04□□□□□ -0.48
BBS4-210ENST00000566400 RTL5Q5HYW3 569 aaPredicted RBP12.03□□□□□ -0.48
BBS4-210ENST00000566400 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
BBS4-210ENST00000566400 PTPRMP28827 1452 aa12.03□□□□□ -0.48
BBS4-210ENST00000566400 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
BBS4-210ENST00000566400 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.48
BBS4-210ENST00000566400 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.48
BBS4-210ENST00000566400 USP35Q9P2H5 1018 aa12.02□□□□□ -0.48
BBS4-210ENST00000566400 ANKRD26Q9UPS8 1709 aa12.02□□□□□ -0.48
BBS4-210ENST00000566400 DLC1Q96QB1 1528 aa12.02□□□□□ -0.49
BBS4-210ENST00000566400 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
BBS4-210ENST00000566400 POGKQ9P215 609 aa12.02□□□□□ -0.49
BBS4-210ENST00000566400 ADGRB2O60241 1585 aa12.02□□□□□ -0.49
BBS4-210ENST00000566400 ZMYM3Q14202 1370 aa12.02□□□□□ -0.49
BBS4-210ENST00000566400 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
BBS4-210ENST00000566400 PPM1GO15355 546 aaPredicted RBP12.01□□□□□ -0.49
BBS4-210ENST00000566400 PMFBP1Q8TBY8 1022 aa12.01□□□□□ -0.49
BBS4-210ENST00000566400 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
BBS4-210ENST00000566400 A0A1W2PP64 1363 aa12.01□□□□□ -0.49
BBS4-210ENST00000566400 BCAR3O75815 825 aa12□□□□□ -0.49
BBS4-210ENST00000566400 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
BBS4-210ENST00000566400 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
BBS4-210ENST00000566400 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
BBS4-210ENST00000566400 CABP2Q9NPB3 220 aa12□□□□□ -0.49
BBS4-210ENST00000566400 ALKQ9UM73 1620 aa12□□□□□ -0.49
BBS4-210ENST00000566400 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
BBS4-210ENST00000566400 IL16Q14005 1332 aa11.99□□□□□ -0.49
BBS4-210ENST00000566400 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
BBS4-210ENST00000566400 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
BBS4-210ENST00000566400 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.49
BBS4-210ENST00000566400 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
BBS4-210ENST00000566400 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
BBS4-210ENST00000566400 ATP7BP35670 1465 aa11.98□□□□□ -0.49
BBS4-210ENST00000566400 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
BBS4-210ENST00000566400 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.98□□□□□ -0.49
BBS4-210ENST00000566400 PRAM1Q96QH2 718 aa11.98□□□□□ -0.49
BBS4-210ENST00000566400 MYO5BQ9ULV0 1848 aa11.97□□□□□ -0.49
BBS4-210ENST00000566400 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
BBS4-210ENST00000566400 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
BBS4-210ENST00000566400 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.49
BBS4-210ENST00000566400 NEFMP07197 916 aa11.96□□□□□ -0.49
BBS4-210ENST00000566400 STK26Q9P289 416 aa11.96□□□□□ -0.49
BBS4-210ENST00000566400 NEUROD2Q15784 382 aa11.96□□□□□ -0.5
BBS4-210ENST00000566400 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms