RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	CFAP70	Q5T0N1	1121 aa		33.29	■■■□□ 2.92
KIFC3-223	ENST00000565684	WAPL	Q7Z5K2	1190 aa		33.29	■■■□□ 2.92
KIFC3-223	ENST00000565684	SPATA31A6	Q5VVP1	1343 aa		33.28	■■■□□ 2.92
KIFC3-223	ENST00000565684	FMN2	Q9NZ56	1722 aa		33.28	■■■□□ 2.92
KIFC3-223	ENST00000565684	ADGRB1	O14514	1584 aa		33.27	■■■□□ 2.92
KIFC3-223	ENST00000565684	ORAI2	Q96SN7	254 aa		33.25	■■■□□ 2.91
KIFC3-223	ENST00000565684	DHX57	Q6P158	1386 aa	Known RBP	33.22	■■■□□ 2.91
KIFC3-223	ENST00000565684	DLC1	Q96QB1	1528 aa		33.2	■■■□□ 2.91
KIFC3-223	ENST00000565684	POTEA	Q6S8J7	498 aa		33.2	■■■□□ 2.91
KIFC3-223	ENST00000565684	SIRT1	Q96EB6	747 aa		33.19	■■■□□ 2.9
KIFC3-223	ENST00000565684	DCAF11	Q8TEB1	546 aa		33.18	■■■□□ 2.9
KIFC3-223	ENST00000565684	PNPLA6	Q8IY17	1366 aa		33.18	■■■□□ 2.9
KIFC3-223	ENST00000565684	RGPD8	O14715	1765 aa	Predicted RBP	33.17	■■■□□ 2.9
KIFC3-223	ENST00000565684	LRRC59	Q96AG4	307 aa	Known RBP	33.17	■■■□□ 2.9
KIFC3-223	ENST00000565684	SOS2	Q07890	1332 aa	Predicted RBP	33.15	■■■□□ 2.9
KIFC3-223	ENST00000565684	KDM2A	Q9Y2K7	1162 aa		33.15	■■■□□ 2.9
KIFC3-223	ENST00000565684	PXDN	Q92626	1479 aa		33.12	■■■□□ 2.89
KIFC3-223	ENST00000565684	KIF1A	Q12756	1690 aa		33.11	■■■□□ 2.89
KIFC3-223	ENST00000565684	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.11	■■■□□ 2.89
KIFC3-223	ENST00000565684	ADGRB2	O60241	1585 aa		33.11	■■■□□ 2.89
KIFC3-223	ENST00000565684	ESCO1	Q5FWF5	840 aa		33.1	■■■□□ 2.89
KIFC3-223	ENST00000565684	NUTM2F	A1L443	756 aa		33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	NUTM2E	B1AL46	878 aa	Predicted RBP	33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	MEX3C	Q5U5Q3	659 aa	Known RBP	33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	STAC3	Q96MF2	364 aa		33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	PRAM1	Q96QH2	718 aa		33.09	■■■□□ 2.89
KIFC3-223	ENST00000565684	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.08	■■■□□ 2.89
KIFC3-223	ENST00000565684	USP32	Q8NFA0	1604 aa		33.07	■■■□□ 2.88
KIFC3-223	ENST00000565684	KIAA1210	Q9ULL0	1709 aa		33.06	■■■□□ 2.88
KIFC3-223	ENST00000565684	NPHP3	Q7Z494	1330 aa		33.04	■■■□□ 2.88
KIFC3-223	ENST00000565684	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.03	■■■□□ 2.88
KIFC3-223	ENST00000565684	TRAK1	Q9UPV9	953 aa		33.02	■■■□□ 2.88
KIFC3-223	ENST00000565684	FOXO3	O43524	673 aa		33	■■■□□ 2.87
KIFC3-223	ENST00000565684	POGK	Q9P215	609 aa		32.98	■■■□□ 2.87
KIFC3-223	ENST00000565684	XPC	Q01831	940 aa	Predicted RBP	32.97	■■■□□ 2.87
KIFC3-223	ENST00000565684	MARF1	Q9Y4F3	1742 aa	Known RBP	32.97	■■■□□ 2.87
KIFC3-223	ENST00000565684	ZNF772	Q68DY9	489 aa	Predicted RBP	32.96	■■■□□ 2.87
KIFC3-223	ENST00000565684	AFF2	P51816	1311 aa		32.95	■■■□□ 2.86
KIFC3-223	ENST00000565684	ANKAR	Q7Z5J8	1434 aa		32.94	■■■□□ 2.86
KIFC3-223	ENST00000565684	C8orf37	Q96NL8	207 aa		32.9	■■■□□ 2.86
KIFC3-223	ENST00000565684	TULP4	Q9NRJ4	1543 aa		32.9	■■■□□ 2.86
KIFC3-223	ENST00000565684	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.89	■■■□□ 2.86
KIFC3-223	ENST00000565684	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.89	■■■□□ 2.86
KIFC3-223	ENST00000565684	PHF8	Q9UPP1	1060 aa		32.89	■■■□□ 2.86
KIFC3-223	ENST00000565684	ADAMTS2	O95450	1211 aa		32.88	■■■□□ 2.85
KIFC3-223	ENST00000565684	SPATA31A3	Q5VYP0	1347 aa		32.85	■■■□□ 2.85
KIFC3-223	ENST00000565684	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.85	■■■□□ 2.85
KIFC3-223	ENST00000565684	PRR36	Q9H6K5	1346 aa		32.84	■■■□□ 2.85
KIFC3-223	ENST00000565684	ABCA3	Q99758	1704 aa		32.84	■■■□□ 2.85
KIFC3-223	ENST00000565684	KRT28	Q7Z3Y7	464 aa		32.83	■■■□□ 2.85
KIFC3-223	ENST00000565684	SIN3A	Q96ST3	1273 aa		32.83	■■■□□ 2.85
KIFC3-223	ENST00000565684	ITSN1	Q15811	1721 aa		32.82	■■■□□ 2.85
KIFC3-223	ENST00000565684	NBPF1	Q3BBV0	1214 aa		32.82	■■■□□ 2.84
KIFC3-223	ENST00000565684	WASL	O00401	505 aa	Predicted RBP	32.81	■■■□□ 2.84
KIFC3-223	ENST00000565684	TNS3	Q68CZ2	1445 aa		32.81	■■■□□ 2.84
KIFC3-223	ENST00000565684	EIF3A	Q14152	1382 aa	Known RBP	32.81	■■■□□ 2.84
KIFC3-223	ENST00000565684	TRPM1	Q7Z4N2	1603 aa		32.8	■■■□□ 2.84
KIFC3-223	ENST00000565684	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.8	■■■□□ 2.84
KIFC3-223	ENST00000565684	L3MBTL2	Q969R5	705 aa		32.79	■■■□□ 2.84
KIFC3-223	ENST00000565684	NGLY1	Q96IV0	654 aa		32.79	■■■□□ 2.84
KIFC3-223	ENST00000565684	ATP7B	P35670	1465 aa		32.79	■■■□□ 2.84
KIFC3-223	ENST00000565684	PMFBP1	Q8TBY8	1022 aa		32.78	■■■□□ 2.84
KIFC3-223	ENST00000565684	TOPAZ1	Q8N9V7	1692 aa		32.78	■■■□□ 2.84
KIFC3-223	ENST00000565684	RXRB	P28702	533 aa		32.77	■■■□□ 2.84
KIFC3-223	ENST00000565684	SBNO1	A3KN83	1393 aa		32.77	■■■□□ 2.84
KIFC3-223	ENST00000565684	ALS2	Q96Q42	1657 aa		32.77	■■■□□ 2.84
KIFC3-223	ENST00000565684	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.74	■■■□□ 2.83
KIFC3-223	ENST00000565684	QRICH2	Q9H0J4	1663 aa		32.74	■■■□□ 2.83
KIFC3-223	ENST00000565684	QTRT2	Q9H974	415 aa	Known RBP	32.73	■■■□□ 2.83
KIFC3-223	ENST00000565684	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.73	■■■□□ 2.83
KIFC3-223	ENST00000565684	PSME1	Q06323	249 aa		32.72	■■■□□ 2.83
KIFC3-223	ENST00000565684	RGS12	O14924	1447 aa		32.71	■■■□□ 2.83
KIFC3-223	ENST00000565684	BCL9L	Q86UU0	1499 aa		32.7	■■■□□ 2.83
KIFC3-223	ENST00000565684	NEUROD1	Q13562	356 aa		32.7	■■■□□ 2.83
KIFC3-223	ENST00000565684	USP21	Q9UK80	565 aa		32.7	■■■□□ 2.83
KIFC3-223	ENST00000565684	CRYBG1	Q9Y4K1	1723 aa		32.69	■■■□□ 2.82
KIFC3-223	ENST00000565684	ATRN	O75882	1429 aa		32.68	■■■□□ 2.82
KIFC3-223	ENST00000565684	RBM6	P78332	1123 aa	Known RBP	32.67	■■■□□ 2.82
KIFC3-223	ENST00000565684	ARHGEF10	O15013	1369 aa		32.67	■■■□□ 2.82
KIFC3-223	ENST00000565684	PLCH1	Q4KWH8	1693 aa		32.66	■■■□□ 2.82
KIFC3-223	ENST00000565684	NUDT16	Q96DE0	195 aa	Known RBP	32.65	■■■□□ 2.82
KIFC3-223	ENST00000565684	SLIT2	O94813	1529 aa		32.65	■■■□□ 2.82
KIFC3-223	ENST00000565684	TRIM26	Q12899	539 aa	Predicted RBP	32.64	■■■□□ 2.82
KIFC3-223	ENST00000565684	CABLES1	Q8TDN4	633 aa		32.64	■■■□□ 2.82
KIFC3-223	ENST00000565684	CDK19	Q9BWU1	502 aa		32.64	■■■□□ 2.82
KIFC3-223	ENST00000565684	GPRASP1	Q5JY77	1395 aa		32.62	■■■□□ 2.81
KIFC3-223	ENST00000565684	TRPC5	Q9UL62	973 aa	Predicted RBP	32.62	■■■□□ 2.81
KIFC3-223	ENST00000565684	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.61	■■■□□ 2.81
KIFC3-223	ENST00000565684	NWD2	Q9ULI1	1742 aa		32.61	■■■□□ 2.81
KIFC3-223	ENST00000565684	LMOD2	Q6P5Q4	547 aa		32.59	■■■□□ 2.81
KIFC3-223	ENST00000565684	NGDN	Q8NEJ9	315 aa	Known RBP	32.58	■■■□□ 2.81
KIFC3-223	ENST00000565684	PLEKHG5	O94827	1062 aa		32.56	■■■□□ 2.8
KIFC3-223	ENST00000565684	GLI3	P10071	1580 aa		32.56	■■■□□ 2.8
KIFC3-223	ENST00000565684	POLR3A	O14802	1390 aa	Predicted RBP	32.56	■■■□□ 2.8
KIFC3-223	ENST00000565684	NBPF8	Q3BBV2	869 aa		32.54	■■■□□ 2.8
KIFC3-223	ENST00000565684	ROCK2	O75116	1388 aa	Known RBP	32.54	■■■□□ 2.8
KIFC3-223	ENST00000565684	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.54	■■■□□ 2.8
KIFC3-223	ENST00000565684	NRAP	Q86VF7	1730 aa		32.54	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms