RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NALCNQ8IZF0 1738 aa17.66■□□□□ 0.42
KARS-204ENST00000564578 MSH6P52701 1360 aa17.65■□□□□ 0.42
KARS-204ENST00000564578 USP47Q96K76 1375 aa17.65■□□□□ 0.42
KARS-204ENST00000564578 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.42
KARS-204ENST00000564578 MINK1Q8N4C8 1332 aaPredicted RBP17.64■□□□□ 0.41
KARS-204ENST00000564578 ST20-MTHFSA0A0A6YYL1 179 aa17.64■□□□□ 0.41
KARS-204ENST00000564578 EIF3AQ14152 1382 aaKnown RBP17.63■□□□□ 0.41
KARS-204ENST00000564578 DCCP43146 1447 aa17.62■□□□□ 0.41
KARS-204ENST00000564578 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
KARS-204ENST00000564578 TESK2Q96S53 571 aa17.62■□□□□ 0.41
KARS-204ENST00000564578 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
KARS-204ENST00000564578 ATF3P18847 181 aa17.6■□□□□ 0.41
KARS-204ENST00000564578 CDC42BPGQ6DT37 1551 aa17.6■□□□□ 0.41
KARS-204ENST00000564578 SBNO2Q9Y2G9 1366 aa17.6■□□□□ 0.41
KARS-204ENST00000564578 ADGRB2O60241 1585 aa17.59■□□□□ 0.41
KARS-204ENST00000564578 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
KARS-204ENST00000564578 WASLO00401 505 aaPredicted RBP17.59■□□□□ 0.41
KARS-204ENST00000564578 EIF4G2P78344 907 aaKnown RBP eCLIP17.59■□□□□ 0.41
KARS-204ENST00000564578 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
KARS-204ENST00000564578 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
KARS-204ENST00000564578 SLAIN2Q9P270 581 aa17.58■□□□□ 0.4
KARS-204ENST00000564578 TOM1O60784 492 aa17.57■□□□□ 0.4
KARS-204ENST00000564578 MST1RQ04912 1400 aa17.57■□□□□ 0.4
KARS-204ENST00000564578 NUTM2FA1L443 756 aa17.57■□□□□ 0.4
KARS-204ENST00000564578 CDK19Q9BWU1 502 aa17.56■□□□□ 0.4
KARS-204ENST00000564578 TULP4Q9NRJ4 1543 aa17.55■□□□□ 0.4
KARS-204ENST00000564578 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
KARS-204ENST00000564578 PRR36Q9H6K5 1346 aa17.54■□□□□ 0.4
KARS-204ENST00000564578 FMN2Q9NZ56 1722 aa17.53■□□□□ 0.4
KARS-204ENST00000564578 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
KARS-204ENST00000564578 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
KARS-204ENST00000564578 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
KARS-204ENST00000564578 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
KARS-204ENST00000564578 DISP3Q9P2K9 1392 aa17.51■□□□□ 0.39
KARS-204ENST00000564578 USP32Q8NFA0 1604 aa17.51■□□□□ 0.39
KARS-204ENST00000564578 BRINP3Q76B58 766 aa17.51■□□□□ 0.39
KARS-204ENST00000564578 SRPK2P78362 688 aaKnown RBP17.5■□□□□ 0.39
KARS-204ENST00000564578 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
KARS-204ENST00000564578 ATP7BP35670 1465 aa17.5■□□□□ 0.39
KARS-204ENST00000564578 ANKARQ7Z5J8 1434 aa17.49■□□□□ 0.39
KARS-204ENST00000564578 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
KARS-204ENST00000564578 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
KARS-204ENST00000564578 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
KARS-204ENST00000564578 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
KARS-204ENST00000564578 TMF1P82094 1093 aa17.48■□□□□ 0.39
KARS-204ENST00000564578 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
KARS-204ENST00000564578 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
KARS-204ENST00000564578 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.39
KARS-204ENST00000564578 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
KARS-204ENST00000564578 ROBO1Q9Y6N7 1651 aa17.45■□□□□ 0.38
KARS-204ENST00000564578 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
KARS-204ENST00000564578 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
KARS-204ENST00000564578 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
KARS-204ENST00000564578 FOXO3O43524 673 aa17.43■□□□□ 0.38
KARS-204ENST00000564578 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
KARS-204ENST00000564578 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
KARS-204ENST00000564578 ATAD2Q6PL18 1390 aa17.42■□□□□ 0.38
KARS-204ENST00000564578 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
KARS-204ENST00000564578 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
KARS-204ENST00000564578 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
KARS-204ENST00000564578 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
KARS-204ENST00000564578 POLR3AO14802 1390 aaPredicted RBP17.39■□□□□ 0.37
KARS-204ENST00000564578 ACEP12821 1306 aa17.39■□□□□ 0.37
KARS-204ENST00000564578 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
KARS-204ENST00000564578 ITSN1Q15811 1721 aa17.38■□□□□ 0.37
KARS-204ENST00000564578 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
KARS-204ENST00000564578 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
KARS-204ENST00000564578 HSPA1LP34931 641 aa17.37■□□□□ 0.37
KARS-204ENST00000564578 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
KARS-204ENST00000564578 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
KARS-204ENST00000564578 NHSL1Q5SYE7 1610 aa17.37■□□□□ 0.37
KARS-204ENST00000564578 AHDC1Q5TGY3 1603 aaPredicted RBP17.37■□□□□ 0.37
KARS-204ENST00000564578 NGDNQ8NEJ9 315 aaKnown RBP17.37■□□□□ 0.37
KARS-204ENST00000564578 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
KARS-204ENST00000564578 CD163L1Q9NR16 1453 aa17.36■□□□□ 0.37
KARS-204ENST00000564578 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
KARS-204ENST00000564578 PXDNQ92626 1479 aa17.36■□□□□ 0.37
KARS-204ENST00000564578 CPSF1Q10570 1443 aaKnown RBP17.35■□□□□ 0.37
KARS-204ENST00000564578 PSME1Q06323 249 aa17.35■□□□□ 0.37
KARS-204ENST00000564578 KRT28Q7Z3Y7 464 aa17.35■□□□□ 0.37
KARS-204ENST00000564578 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
KARS-204ENST00000564578 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
KARS-204ENST00000564578 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
KARS-204ENST00000564578 MYT1Q01538 1121 aa17.33■□□□□ 0.37
KARS-204ENST00000564578 CCDC7Q96M83 1385 aa17.33■□□□□ 0.37
KARS-204ENST00000564578 ILDR1Q86SU0 546 aaPredicted RBP17.33■□□□□ 0.36
KARS-204ENST00000564578 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.36
KARS-204ENST00000564578 MYOM1P52179 1685 aa17.32■□□□□ 0.36
KARS-204ENST00000564578 PHLPP1O60346 1717 aa17.32■□□□□ 0.36
KARS-204ENST00000564578 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
KARS-204ENST00000564578 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
KARS-204ENST00000564578 USP6P35125 1406 aa17.31■□□□□ 0.36
KARS-204ENST00000564578 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
KARS-204ENST00000564578 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
KARS-204ENST00000564578 LRRC59Q96AG4 307 aaKnown RBP17.29■□□□□ 0.36
KARS-204ENST00000564578 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
KARS-204ENST00000564578 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
KARS-204ENST00000564578 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
KARS-204ENST00000564578 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
KARS-204ENST00000564578 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms