RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 QRICH2Q9H0J4 1663 aa26.26■■□□□ 1.79
SPNS1-206ENST00000564476 TMF1P82094 1093 aa26.26■■□□□ 1.79
SPNS1-206ENST00000564476 HIRIP3Q9BW71 556 aaPredicted RBP26.26■■□□□ 1.79
SPNS1-206ENST00000564476 NKTRP30414 1462 aaKnown RBP26.25■■□□□ 1.79
SPNS1-206ENST00000564476 CDCA8Q53HL2 280 aa26.24■■□□□ 1.79
SPNS1-206ENST00000564476 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
SPNS1-206ENST00000564476 NCOA3Q9Y6Q9 1424 aa26.23■■□□□ 1.79
SPNS1-206ENST00000564476 PROSER2Q86WR7 435 aaPredicted RBP26.22■■□□□ 1.79
SPNS1-206ENST00000564476 PUS7Q96PZ0 661 aaKnown RBP26.22■■□□□ 1.79
SPNS1-206ENST00000564476 PLEKHH1Q9ULM0 1364 aa26.2■■□□□ 1.79
SPNS1-206ENST00000564476 EVC2Q86UK5 1308 aa26.19■■□□□ 1.78
SPNS1-206ENST00000564476 SAFB2Q14151 953 aaKnown RBP eCLIP26.19■■□□□ 1.78
SPNS1-206ENST00000564476 XIRP1Q702N8 1843 aaKnown RBP26.18■■□□□ 1.78
SPNS1-206ENST00000564476 MINK1Q8N4C8 1332 aaPredicted RBP26.16■■□□□ 1.78
SPNS1-206ENST00000564476 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.15■■□□□ 1.78
SPNS1-206ENST00000564476 C11orf95C9JLR9 678 aaPredicted RBP26.14■■□□□ 1.78
SPNS1-206ENST00000564476 TOM1O60784 492 aa26.14■■□□□ 1.78
SPNS1-206ENST00000564476 WASLO00401 505 aaPredicted RBP26.13■■□□□ 1.77
SPNS1-206ENST00000564476 C19orf44Q9H6X5 657 aa26.11■■□□□ 1.77
SPNS1-206ENST00000564476 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
SPNS1-206ENST00000564476 TMEM94Q12767 1356 aa26.1■■□□□ 1.77
SPNS1-206ENST00000564476 DISP3Q9P2K9 1392 aa26.1■■□□□ 1.77
SPNS1-206ENST00000564476 PIP4K2BP78356 416 aa26.1■■□□□ 1.77
SPNS1-206ENST00000564476 C14orf37Q86TY3 774 aa26.1■■□□□ 1.77
SPNS1-206ENST00000564476 CDK19Q9BWU1 502 aa26.1■■□□□ 1.77
SPNS1-206ENST00000564476 CCDC7Q96M83 1385 aa26.09■■□□□ 1.77
SPNS1-206ENST00000564476 ADGRL3Q9HAR2 1447 aa26.09■■□□□ 1.77
SPNS1-206ENST00000564476 KIF7Q2M1P5 1343 aa26.09■■□□□ 1.77
SPNS1-206ENST00000564476 WASHC2AQ641Q2 1341 aa26.09■■□□□ 1.77
SPNS1-206ENST00000564476 SCAF1Q9H7N4 1312 aaKnown RBP26.09■■□□□ 1.77
SPNS1-206ENST00000564476 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
SPNS1-206ENST00000564476 SRPK2P78362 688 aaKnown RBP26.07■■□□□ 1.76
SPNS1-206ENST00000564476 ATAD2Q6PL18 1390 aa26.05■■□□□ 1.76
SPNS1-206ENST00000564476 NALCNQ8IZF0 1738 aa26.05■■□□□ 1.76
SPNS1-206ENST00000564476 RBM33Q96EV2 1170 aaKnown RBP26.04■■□□□ 1.76
SPNS1-206ENST00000564476 HSPA1LP34931 641 aa26.03■■□□□ 1.76
SPNS1-206ENST00000564476 CABP2Q9NPB3 220 aa26.03■■□□□ 1.76
SPNS1-206ENST00000564476 DCCP43146 1447 aa26.03■■□□□ 1.76
SPNS1-206ENST00000564476 MSH6P52701 1360 aa26.02■■□□□ 1.76
SPNS1-206ENST00000564476 CADPS2Q86UW7 1296 aa26.01■■□□□ 1.75
SPNS1-206ENST00000564476 NINLQ9Y2I6 1382 aa26.01■■□□□ 1.75
SPNS1-206ENST00000564476 CCDC61Q9Y6R9 512 aa26.01■■□□□ 1.75
SPNS1-206ENST00000564476 CDC42BPGQ6DT37 1551 aa26■■□□□ 1.75
SPNS1-206ENST00000564476 ATF3P18847 181 aa26■■□□□ 1.75
SPNS1-206ENST00000564476 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
SPNS1-206ENST00000564476 POLR3GLQ9BT43 218 aa25.99■■□□□ 1.75
SPNS1-206ENST00000564476 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
SPNS1-206ENST00000564476 FMN2Q9NZ56 1722 aa25.97■■□□□ 1.75
SPNS1-206ENST00000564476 MYOM1P52179 1685 aa25.94■■□□□ 1.74
SPNS1-206ENST00000564476 PLEKHG3A1L390 1219 aa25.92■■□□□ 1.74
SPNS1-206ENST00000564476 TMC1Q8TDI8 760 aa25.92■■□□□ 1.74
SPNS1-206ENST00000564476 PRR36Q9H6K5 1346 aa25.91■■□□□ 1.74
SPNS1-206ENST00000564476 DDX10Q13206 875 aaKnown RBP25.91■■□□□ 1.74
SPNS1-206ENST00000564476 MED1Q15648 1581 aaPredicted RBP25.9■■□□□ 1.74
SPNS1-206ENST00000564476 USP32Q8NFA0 1604 aa25.9■■□□□ 1.74
SPNS1-206ENST00000564476 SLC12A5Q9H2X9 1139 aa25.9■■□□□ 1.74
SPNS1-206ENST00000564476 TERF2IPQ9NYB0 399 aa25.9■■□□□ 1.74
SPNS1-206ENST00000564476 CABP1Q9NZU7 370 aa25.9■■□□□ 1.74
SPNS1-206ENST00000564476 ATP7BP35670 1465 aa25.9■■□□□ 1.74
SPNS1-206ENST00000564476 RGPD8O14715 1765 aaPredicted RBP25.9■■□□□ 1.74
SPNS1-206ENST00000564476 ITSN1Q15811 1721 aa25.89■■□□□ 1.74
SPNS1-206ENST00000564476 TOPAZ1Q8N9V7 1692 aa25.88■■□□□ 1.73
SPNS1-206ENST00000564476 ILDR2Q71H61 639 aa25.88■■□□□ 1.73
SPNS1-206ENST00000564476 ZNF692Q9BU19 519 aaPredicted RBP25.88■■□□□ 1.73
SPNS1-206ENST00000564476 NUTM2FA1L443 756 aa25.87■■□□□ 1.73
SPNS1-206ENST00000564476 PPIP5K1Q6PFW1 1433 aa25.87■■□□□ 1.73
SPNS1-206ENST00000564476 HDGFL2Q7Z4V5 671 aaPredicted RBP25.86■■□□□ 1.73
SPNS1-206ENST00000564476 ROBO1Q9Y6N7 1651 aa25.85■■□□□ 1.73
SPNS1-206ENST00000564476 PANK3Q9H999 370 aa25.85■■□□□ 1.73
SPNS1-206ENST00000564476 SLAIN2Q9P270 581 aa25.85■■□□□ 1.73
SPNS1-206ENST00000564476 MST1RQ04912 1400 aa25.85■■□□□ 1.73
SPNS1-206ENST00000564476 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
SPNS1-206ENST00000564476 ANKRD36BQ8N2N9 1353 aa25.83■■□□□ 1.73
SPNS1-206ENST00000564476 ESCO1Q5FWF5 840 aa25.83■■□□□ 1.73
SPNS1-206ENST00000564476 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
SPNS1-206ENST00000564476 NGDNQ8NEJ9 315 aaKnown RBP25.8■■□□□ 1.72
SPNS1-206ENST00000564476 POLR3AO14802 1390 aaPredicted RBP25.8■■□□□ 1.72
SPNS1-206ENST00000564476 CPSF1Q10570 1443 aaKnown RBP25.8■■□□□ 1.72
SPNS1-206ENST00000564476 ACEP12821 1306 aa25.79■■□□□ 1.72
SPNS1-206ENST00000564476 AKAP12Q02952 1782 aa25.78■■□□□ 1.72
SPNS1-206ENST00000564476 PER1O15534 1290 aaPredicted RBP25.78■■□□□ 1.72
SPNS1-206ENST00000564476 BRD4O60885 1362 aaPredicted RBP25.78■■□□□ 1.72
SPNS1-206ENST00000564476 CD163L1Q9NR16 1453 aa25.78■■□□□ 1.72
SPNS1-206ENST00000564476 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
SPNS1-206ENST00000564476 ORAI2Q96SN7 254 aa25.77■■□□□ 1.72
SPNS1-206ENST00000564476 KNSTRNQ9Y448 316 aa25.77■■□□□ 1.72
SPNS1-206ENST00000564476 A0A1W2PP64 1363 aa25.75■■□□□ 1.71
SPNS1-206ENST00000564476 CARD14Q9BXL6 1004 aa25.75■■□□□ 1.71
SPNS1-206ENST00000564476 KTN1Q86UP2 1357 aaKnown RBP25.74■■□□□ 1.71
SPNS1-206ENST00000564476 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
SPNS1-206ENST00000564476 KIF1AQ12756 1690 aa25.73■■□□□ 1.71
SPNS1-206ENST00000564476 MON2Q7Z3U7 1717 aa25.72■■□□□ 1.71
SPNS1-206ENST00000564476 PSME1Q06323 249 aa25.72■■□□□ 1.71
SPNS1-206ENST00000564476 BRINP3Q76B58 766 aa25.72■■□□□ 1.71
SPNS1-206ENST00000564476 NPHP3Q7Z494 1330 aa25.7■■□□□ 1.71
SPNS1-206ENST00000564476 EDC4Q6P2E9 1401 aaKnown RBP25.7■■□□□ 1.7
SPNS1-206ENST00000564476 NPC1L1Q9UHC9 1359 aa25.69■■□□□ 1.7
SPNS1-206ENST00000564476 CGNL1Q0VF96 1302 aa25.69■■□□□ 1.7
SPNS1-206ENST00000564476 PHLPP1O60346 1717 aa25.69■■□□□ 1.7
SPNS1-206ENST00000564476 FOXO3O43524 673 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms