RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 UBAP1LF5GYI3 381 aa21.74■■□□□ 1.07
EDC3-206ENST00000563009 TOM1O60784 492 aa21.74■■□□□ 1.07
EDC3-206ENST00000563009 FBXO41Q8TF61 875 aa21.73■■□□□ 1.07
EDC3-206ENST00000563009 CDC42BPGQ6DT37 1551 aa21.72■■□□□ 1.07
EDC3-206ENST00000563009 CADPS2Q86UW7 1296 aa21.71■■□□□ 1.07
EDC3-206ENST00000563009 POGKQ9P215 609 aa21.71■■□□□ 1.07
EDC3-206ENST00000563009 ATF3P18847 181 aa21.7■■□□□ 1.06
EDC3-206ENST00000563009 ADGRB2O60241 1585 aa21.7■■□□□ 1.06
EDC3-206ENST00000563009 CARD11Q9BXL7 1154 aa21.69■■□□□ 1.06
EDC3-206ENST00000563009 SAFB2Q14151 953 aaKnown RBP eCLIP21.67■■□□□ 1.06
EDC3-206ENST00000563009 MST1RQ04912 1400 aa21.66■■□□□ 1.06
EDC3-206ENST00000563009 SLAIN2Q9P270 581 aa21.66■■□□□ 1.06
EDC3-206ENST00000563009 EIF3AQ14152 1382 aaKnown RBP21.65■■□□□ 1.06
EDC3-206ENST00000563009 CENPJQ9HC77 1338 aaPredicted RBP21.64■■□□□ 1.05
EDC3-206ENST00000563009 FMN2Q9NZ56 1722 aa21.63■■□□□ 1.05
EDC3-206ENST00000563009 QRICH2Q9H0J4 1663 aa21.63■■□□□ 1.05
EDC3-206ENST00000563009 MINK1Q8N4C8 1332 aaPredicted RBP21.62■■□□□ 1.05
EDC3-206ENST00000563009 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
EDC3-206ENST00000563009 C1orf167Q5SNV9 1468 aa21.61■■□□□ 1.05
EDC3-206ENST00000563009 ROBO1Q9Y6N7 1651 aa21.6■■□□□ 1.05
EDC3-206ENST00000563009 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
EDC3-206ENST00000563009 WASLO00401 505 aaPredicted RBP21.58■■□□□ 1.05
EDC3-206ENST00000563009 SBNO2Q9Y2G9 1366 aa21.58■■□□□ 1.04
EDC3-206ENST00000563009 SCAF1Q9H7N4 1312 aaKnown RBP21.57■■□□□ 1.04
EDC3-206ENST00000563009 USP47Q96K76 1375 aa21.56■■□□□ 1.04
EDC3-206ENST00000563009 ANKARQ7Z5J8 1434 aa21.55■■□□□ 1.04
EDC3-206ENST00000563009 TULP4Q9NRJ4 1543 aa21.55■■□□□ 1.04
EDC3-206ENST00000563009 USP32Q8NFA0 1604 aa21.55■■□□□ 1.04
EDC3-206ENST00000563009 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
EDC3-206ENST00000563009 RGPD8O14715 1765 aaPredicted RBP21.52■■□□□ 1.04
EDC3-206ENST00000563009 CDK19Q9BWU1 502 aa21.52■■□□□ 1.04
EDC3-206ENST00000563009 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
EDC3-206ENST00000563009 NUTM2FA1L443 756 aa21.51■■□□□ 1.03
EDC3-206ENST00000563009 ORAI2Q96SN7 254 aa21.51■■□□□ 1.03
EDC3-206ENST00000563009 PRR36Q9H6K5 1346 aa21.51■■□□□ 1.03
EDC3-206ENST00000563009 ATP7BP35670 1465 aa21.51■■□□□ 1.03
EDC3-206ENST00000563009 AHDC1Q5TGY3 1603 aaPredicted RBP21.51■■□□□ 1.03
EDC3-206ENST00000563009 TESK2Q96S53 571 aa21.5■■□□□ 1.03
EDC3-206ENST00000563009 NHSL1Q5SYE7 1610 aa21.49■■□□□ 1.03
EDC3-206ENST00000563009 ESCO1Q5FWF5 840 aa21.49■■□□□ 1.03
EDC3-206ENST00000563009 EVC2Q86UK5 1308 aa21.49■■□□□ 1.03
EDC3-206ENST00000563009 KIF1AQ12756 1690 aa21.48■■□□□ 1.03
EDC3-206ENST00000563009 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
EDC3-206ENST00000563009 HSPA1LP34931 641 aa21.47■■□□□ 1.03
EDC3-206ENST00000563009 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
EDC3-206ENST00000563009 SLC24A1O60721 1099 aa21.46■■□□□ 1.03
EDC3-206ENST00000563009 NUDT16Q96DE0 195 aaKnown RBP21.46■■□□□ 1.03
EDC3-206ENST00000563009 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
EDC3-206ENST00000563009 SRPK2P78362 688 aaKnown RBP21.45■■□□□ 1.02
EDC3-206ENST00000563009 COL16A1Q07092 1604 aaPredicted RBP21.44■■□□□ 1.02
EDC3-206ENST00000563009 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.02
EDC3-206ENST00000563009 CABP2Q9NPB3 220 aa21.44■■□□□ 1.02
EDC3-206ENST00000563009 PHF8Q9UPP1 1060 aa21.44■■□□□ 1.02
EDC3-206ENST00000563009 CCDC61Q9Y6R9 512 aa21.43■■□□□ 1.02
EDC3-206ENST00000563009 NPHP3Q7Z494 1330 aa21.41■■□□□ 1.02
EDC3-206ENST00000563009 DDX17Q92841 729 aaKnown RBP21.41■■□□□ 1.02
EDC3-206ENST00000563009 PUS7Q96PZ0 661 aaKnown RBP21.41■■□□□ 1.02
EDC3-206ENST00000563009 PXDNQ92626 1479 aa21.4■■□□□ 1.02
EDC3-206ENST00000563009 SOS2Q07890 1332 aaPredicted RBP21.4■■□□□ 1.02
EDC3-206ENST00000563009 FOXO3O43524 673 aa21.4■■□□□ 1.02
EDC3-206ENST00000563009 HSPA5P11021 654 aaKnown RBP21.4■■□□□ 1.02
EDC3-206ENST00000563009 ATAD2Q6PL18 1390 aa21.39■■□□□ 1.02
EDC3-206ENST00000563009 PLEKHG3A1L390 1219 aa21.39■■□□□ 1.01
EDC3-206ENST00000563009 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
EDC3-206ENST00000563009 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
EDC3-206ENST00000563009 PMFBP1Q8TBY8 1022 aa21.38■■□□□ 1.01
EDC3-206ENST00000563009 POLR3AO14802 1390 aaPredicted RBP21.37■■□□□ 1.01
EDC3-206ENST00000563009 TMF1P82094 1093 aa21.37■■□□□ 1.01
EDC3-206ENST00000563009 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
EDC3-206ENST00000563009 NGDNQ8NEJ9 315 aaKnown RBP21.33■■□□□ 1.01
EDC3-206ENST00000563009 LRRC59Q96AG4 307 aaKnown RBP21.33■■□□□ 1.01
EDC3-206ENST00000563009 CABP1Q9NZU7 370 aa21.33■■□□□ 1.01
EDC3-206ENST00000563009 ACEP12821 1306 aa21.32■■□□□ 1
EDC3-206ENST00000563009 SHPRHQ149N8 1683 aa21.32■■□□□ 1
EDC3-206ENST00000563009 XPCQ01831 940 aaPredicted RBP21.32■■□□□ 1
EDC3-206ENST00000563009 PSME1Q06323 249 aa21.32■■□□□ 1
EDC3-206ENST00000563009 CDCA8Q53HL2 280 aa21.32■■□□□ 1
EDC3-206ENST00000563009 KRT28Q7Z3Y7 464 aa21.32■■□□□ 1
EDC3-206ENST00000563009 JCADQ9P266 1359 aa21.32■■□□□ 1
EDC3-206ENST00000563009 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
EDC3-206ENST00000563009 SBNO1A3KN83 1393 aa21.31■■□□□ 1
EDC3-206ENST00000563009 NINLQ9Y2I6 1382 aa21.3■■□□□ 1
EDC3-206ENST00000563009 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
EDC3-206ENST00000563009 AKAP12Q02952 1782 aa21.28■■□□□ 1
EDC3-206ENST00000563009 SPATA31A3Q5VYP0 1347 aa21.28■■□□□ 1
EDC3-206ENST00000563009 CD163L1Q9NR16 1453 aa21.27■■□□□ 1
EDC3-206ENST00000563009 PNPLA6Q8IY17 1366 aa21.27■■□□□ 1
EDC3-206ENST00000563009 TNS3Q68CZ2 1445 aa21.27■■□□□ 1
EDC3-206ENST00000563009 COL22A1Q8NFW1 1626 aaPredicted RBP21.26■□□□□ 0.99
EDC3-206ENST00000563009 BRD4O60885 1362 aaPredicted RBP21.26■□□□□ 0.99
EDC3-206ENST00000563009 ALS2Q96Q42 1657 aa21.26■□□□□ 0.99
EDC3-206ENST00000563009 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
EDC3-206ENST00000563009 USP6P35125 1406 aa21.26■□□□□ 0.99
EDC3-206ENST00000563009 TMC1Q8TDI8 760 aa21.25■□□□□ 0.99
EDC3-206ENST00000563009 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
EDC3-206ENST00000563009 MYOM1P52179 1685 aa21.24■□□□□ 0.99
EDC3-206ENST00000563009 MON2Q7Z3U7 1717 aa21.24■□□□□ 0.99
EDC3-206ENST00000563009 SSH2Q76I76 1423 aa21.24■□□□□ 0.99
EDC3-206ENST00000563009 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
EDC3-206ENST00000563009 SPATA31A6Q5VVP1 1343 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms