RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 DDX17Q92841 729 aaKnown RBP16■□□□□ 0.15
SIN3A-204ENST00000562776 ORAI2Q96SN7 254 aa16■□□□□ 0.15
SIN3A-204ENST00000562776 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
SIN3A-204ENST00000562776 TECPR2O15040 1411 aa15.99■□□□□ 0.15
SIN3A-204ENST00000562776 LRPPRCP42704 1394 aaKnown RBP15.99■□□□□ 0.15
SIN3A-204ENST00000562776 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
SIN3A-204ENST00000562776 ABCC11Q96J66 1382 aa15.98■□□□□ 0.15
SIN3A-204ENST00000562776 AFF2P51816 1311 aa15.97■□□□□ 0.15
SIN3A-204ENST00000562776 KNDC1Q76NI1 1749 aa15.97■□□□□ 0.15
SIN3A-204ENST00000562776 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
SIN3A-204ENST00000562776 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
SIN3A-204ENST00000562776 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
SIN3A-204ENST00000562776 TMEM132EQ6IEE7 984 aa15.96■□□□□ 0.15
SIN3A-204ENST00000562776 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
SIN3A-204ENST00000562776 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
SIN3A-204ENST00000562776 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
SIN3A-204ENST00000562776 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
SIN3A-204ENST00000562776 UPF1Q92900 1129 aaKnown RBP eCLIP15.95■□□□□ 0.14
SIN3A-204ENST00000562776 QTRT2Q9H974 415 aaKnown RBP15.94■□□□□ 0.14
SIN3A-204ENST00000562776 STK26Q9P289 416 aa15.94■□□□□ 0.14
SIN3A-204ENST00000562776 CDC42BPGQ6DT37 1551 aa15.93■□□□□ 0.14
SIN3A-204ENST00000562776 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
SIN3A-204ENST00000562776 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
SIN3A-204ENST00000562776 ADGRB1O14514 1584 aa15.92■□□□□ 0.14
SIN3A-204ENST00000562776 C8orf37Q96NL8 207 aa15.92■□□□□ 0.14
SIN3A-204ENST00000562776 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
SIN3A-204ENST00000562776 ESCO1Q5FWF5 840 aa15.91■□□□□ 0.14
SIN3A-204ENST00000562776 WAPLQ7Z5K2 1190 aa15.91■□□□□ 0.14
SIN3A-204ENST00000562776 FNBP4Q8N3X1 1017 aaPredicted RBP15.91■□□□□ 0.14
SIN3A-204ENST00000562776 NGLY1Q96IV0 654 aa15.91■□□□□ 0.14
SIN3A-204ENST00000562776 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
SIN3A-204ENST00000562776 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
SIN3A-204ENST00000562776 ADAMTS2O95450 1211 aa15.89■□□□□ 0.13
SIN3A-204ENST00000562776 COL22A1Q8NFW1 1626 aaPredicted RBP15.89■□□□□ 0.13
SIN3A-204ENST00000562776 FOXO3O43524 673 aa15.88■□□□□ 0.13
SIN3A-204ENST00000562776 PXDNQ92626 1479 aa15.88■□□□□ 0.13
SIN3A-204ENST00000562776 USP21Q9UK80 565 aa15.86■□□□□ 0.13
SIN3A-204ENST00000562776 TRPC5Q9UL62 973 aaPredicted RBP15.86■□□□□ 0.13
SIN3A-204ENST00000562776 RGS12O14924 1447 aa15.85■□□□□ 0.13
SIN3A-204ENST00000562776 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
SIN3A-204ENST00000562776 SIN3AQ96ST3 1273 aa15.84■□□□□ 0.13
SIN3A-204ENST00000562776 KIAA1210Q9ULL0 1709 aa15.84■□□□□ 0.13
SIN3A-204ENST00000562776 TRAK1Q9UPV9 953 aa15.83■□□□□ 0.12
SIN3A-204ENST00000562776 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
SIN3A-204ENST00000562776 SPATA31A3Q5VYP0 1347 aa15.82■□□□□ 0.12
SIN3A-204ENST00000562776 ADGRB2O60241 1585 aa15.82■□□□□ 0.12
SIN3A-204ENST00000562776 NUTM2FA1L443 756 aa15.81■□□□□ 0.12
SIN3A-204ENST00000562776 ATRNO75882 1429 aa15.81■□□□□ 0.12
SIN3A-204ENST00000562776 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.12
SIN3A-204ENST00000562776 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
SIN3A-204ENST00000562776 L3MBTL2Q969R5 705 aa15.81■□□□□ 0.12
SIN3A-204ENST00000562776 POGKQ9P215 609 aa15.81■□□□□ 0.12
SIN3A-204ENST00000562776 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
SIN3A-204ENST00000562776 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
SIN3A-204ENST00000562776 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
SIN3A-204ENST00000562776 ARHGEF28Q8N1W1 1705 aaKnown RBP15.8■□□□□ 0.12
SIN3A-204ENST00000562776 KIF1AQ12756 1690 aa15.79■□□□□ 0.12
SIN3A-204ENST00000562776 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
SIN3A-204ENST00000562776 PSME1Q06323 249 aa15.78■□□□□ 0.12
SIN3A-204ENST00000562776 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.11
SIN3A-204ENST00000562776 SBNO1A3KN83 1393 aa15.76■□□□□ 0.11
SIN3A-204ENST00000562776 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
SIN3A-204ENST00000562776 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
SIN3A-204ENST00000562776 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
SIN3A-204ENST00000562776 ANKARQ7Z5J8 1434 aa15.76■□□□□ 0.11
SIN3A-204ENST00000562776 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
SIN3A-204ENST00000562776 SLIT2O94813 1529 aa15.75■□□□□ 0.11
SIN3A-204ENST00000562776 UNC5CLQ8IV45 518 aa15.74■□□□□ 0.11
SIN3A-204ENST00000562776 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
SIN3A-204ENST00000562776 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
SIN3A-204ENST00000562776 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
SIN3A-204ENST00000562776 USP32Q8NFA0 1604 aa15.73■□□□□ 0.11
SIN3A-204ENST00000562776 CCDC125Q86Z20 511 aa15.73■□□□□ 0.11
SIN3A-204ENST00000562776 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
SIN3A-204ENST00000562776 TNS3Q68CZ2 1445 aa15.72■□□□□ 0.11
SIN3A-204ENST00000562776 RGPD8O14715 1765 aaPredicted RBP15.72■□□□□ 0.11
SIN3A-204ENST00000562776 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.11
SIN3A-204ENST00000562776 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.11
SIN3A-204ENST00000562776 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
SIN3A-204ENST00000562776 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
SIN3A-204ENST00000562776 ONECUT3O60422 494 aaPredicted RBP15.7■□□□□ 0.1
SIN3A-204ENST00000562776 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
SIN3A-204ENST00000562776 PRR36Q9H6K5 1346 aa15.68■□□□□ 0.1
SIN3A-204ENST00000562776 VPS72Q15906 364 aa15.68■□□□□ 0.1
SIN3A-204ENST00000562776 PMFBP1Q8TBY8 1022 aa15.68■□□□□ 0.1
SIN3A-204ENST00000562776 CABLES1Q8TDN4 633 aa15.68■□□□□ 0.1
SIN3A-204ENST00000562776 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
SIN3A-204ENST00000562776 ATP7BP35670 1465 aa15.67■□□□□ 0.1
SIN3A-204ENST00000562776 RALGAPBQ86X10 1494 aa15.67■□□□□ 0.1
SIN3A-204ENST00000562776 NBPF8Q3BBV2 869 aa15.67■□□□□ 0.1
SIN3A-204ENST00000562776 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
SIN3A-204ENST00000562776 GLI3P10071 1580 aa15.66■□□□□ 0.1
SIN3A-204ENST00000562776 GPRASP1Q5JY77 1395 aa15.66■□□□□ 0.1
SIN3A-204ENST00000562776 QRICH2Q9H0J4 1663 aa15.66■□□□□ 0.1
SIN3A-204ENST00000562776 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
SIN3A-204ENST00000562776 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
SIN3A-204ENST00000562776 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
SIN3A-204ENST00000562776 CDK19Q9BWU1 502 aa15.64■□□□□ 0.09
SIN3A-204ENST00000562776 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
SIN3A-204ENST00000562776 NWD2Q9ULI1 1742 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms