RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 ADGRB3O60242 1522 aa10.12□□□□□ -0.79
USP8-213ENST00000560885 MYO5BQ9ULV0 1848 aa10.12□□□□□ -0.79
USP8-213ENST00000560885 DAPK1P53355 1430 aa10.11□□□□□ -0.79
USP8-213ENST00000560885 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
USP8-213ENST00000560885 PCDHB13Q9Y5F0 798 aa10.11□□□□□ -0.79
USP8-213ENST00000560885 NOS1P29475 1434 aa10.1□□□□□ -0.79
USP8-213ENST00000560885 POTEAQ6S8J7 498 aa10.1□□□□□ -0.79
USP8-213ENST00000560885 SLC26A8Q96RN1 970 aa10.1□□□□□ -0.79
USP8-213ENST00000560885 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
USP8-213ENST00000560885 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
USP8-213ENST00000560885 SLC52A1Q9NWF4 448 aa10.09□□□□□ -0.79
USP8-213ENST00000560885 MSH6P52701 1360 aa10.09□□□□□ -0.79
USP8-213ENST00000560885 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
USP8-213ENST00000560885 SETD1AO15047 1707 aaKnown RBP10.08□□□□□ -0.8
USP8-213ENST00000560885 SLAIN1Q8ND83 568 aa10.08□□□□□ -0.8
USP8-213ENST00000560885 SLAIN2Q9P270 581 aa10.08□□□□□ -0.8
USP8-213ENST00000560885 RPRD2Q5VT52 1461 aaKnown RBP10.08□□□□□ -0.8
USP8-213ENST00000560885 TMEM131LA2VDJ0 1609 aa10.07□□□□□ -0.8
USP8-213ENST00000560885 COL16A1Q07092 1604 aaPredicted RBP10.07□□□□□ -0.8
USP8-213ENST00000560885 JCADQ9P266 1359 aa10.06□□□□□ -0.8
USP8-213ENST00000560885 ST18O60284 1047 aa10.06□□□□□ -0.8
USP8-213ENST00000560885 RBM33Q96EV2 1170 aaKnown RBP10.06□□□□□ -0.8
USP8-213ENST00000560885 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
USP8-213ENST00000560885 ZFYVE9O95405 1425 aa10.06□□□□□ -0.8
USP8-213ENST00000560885 NCOA3Q9Y6Q9 1424 aa10.06□□□□□ -0.8
USP8-213ENST00000560885 ADGRL2O95490 1459 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 PLEKHG1Q9ULL1 1385 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 LOC105371045A0A1W2PR82 267 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 PLCG2P16885 1265 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 HDGFP51858 240 aaKnown RBP10.05□□□□□ -0.8
USP8-213ENST00000560885 BCANQ96GW7 911 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
USP8-213ENST00000560885 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.04□□□□□ -0.8
USP8-213ENST00000560885 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
USP8-213ENST00000560885 DIP2AQ14689 1571 aa10.03□□□□□ -0.8
USP8-213ENST00000560885 RIMS2Q9UQ26 1411 aa10.03□□□□□ -0.8
USP8-213ENST00000560885 AHDC1Q5TGY3 1603 aaPredicted RBP10.03□□□□□ -0.8
USP8-213ENST00000560885 SPATA31A6Q5VVP1 1343 aa10.03□□□□□ -0.8
USP8-213ENST00000560885 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
USP8-213ENST00000560885 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
USP8-213ENST00000560885 TBX22Q9Y458 520 aa10.02□□□□□ -0.81
USP8-213ENST00000560885 E9PCH4 1651 aa10.02□□□□□ -0.81
USP8-213ENST00000560885 UNC13BO14795 1591 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 ANKRD50Q9ULJ7 1429 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 SNPHO15079 494 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 NUBP1P53384 320 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 IFNL1Q8IU54 200 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP8-213ENST00000560885 TMEM106CQ9BVX2 250 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 PIK3R4Q99570 1358 aa10.01□□□□□ -0.81
USP8-213ENST00000560885 LRP6O75581 1613 aa10□□□□□ -0.81
USP8-213ENST00000560885 IRX5P78411 483 aaPredicted RBP10□□□□□ -0.81
USP8-213ENST00000560885 ZNF772Q68DY9 489 aaPredicted RBP10□□□□□ -0.81
USP8-213ENST00000560885 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
USP8-213ENST00000560885 C19orf44Q9H6X5 657 aa10□□□□□ -0.81
USP8-213ENST00000560885 TRPM2O94759 1503 aa9.99□□□□□ -0.81
USP8-213ENST00000560885 C14orf37Q86TY3 774 aa9.99□□□□□ -0.81
USP8-213ENST00000560885 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
USP8-213ENST00000560885 IQGAP3Q86VI3 1631 aa9.98□□□□□ -0.81
USP8-213ENST00000560885 ATF3P18847 181 aa9.98□□□□□ -0.81
USP8-213ENST00000560885 MEX3CQ5U5Q3 659 aaKnown RBP9.98□□□□□ -0.81
USP8-213ENST00000560885 NHSL1Q5SYE7 1610 aa9.97□□□□□ -0.81
USP8-213ENST00000560885 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
USP8-213ENST00000560885 DCCP43146 1447 aa9.97□□□□□ -0.81
USP8-213ENST00000560885 CDK12Q9NYV4 1490 aaPredicted RBP9.96□□□□□ -0.82
USP8-213ENST00000560885 XRN1Q8IZH2 1706 aaKnown RBP9.96□□□□□ -0.82
USP8-213ENST00000560885 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
USP8-213ENST00000560885 CHGAP10645 457 aaKnown RBP9.95□□□□□ -0.82
USP8-213ENST00000560885 MMRN1Q13201 1228 aa9.95□□□□□ -0.82
USP8-213ENST00000560885 FAM50AQ14320 339 aaKnown RBP9.95□□□□□ -0.82
USP8-213ENST00000560885 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
USP8-213ENST00000560885 SPHKAPQ2M3C7 1700 aa9.94□□□□□ -0.82
USP8-213ENST00000560885 NRXN3Q9Y4C0 1643 aa9.94□□□□□ -0.82
USP8-213ENST00000560885 RXRBP28702 533 aa9.94□□□□□ -0.82
USP8-213ENST00000560885 BRINP3Q76B58 766 aa9.94□□□□□ -0.82
USP8-213ENST00000560885 TRIM52Q96A61 297 aa9.94□□□□□ -0.82
USP8-213ENST00000560885 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
USP8-213ENST00000560885 SETBP1Q9Y6X0 1596 aa9.93□□□□□ -0.82
USP8-213ENST00000560885 ASXL1Q8IXJ9 1541 aa9.93□□□□□ -0.82
USP8-213ENST00000560885 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
USP8-213ENST00000560885 SPNS2Q8IVW8 549 aa9.93□□□□□ -0.82
USP8-213ENST00000560885 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
USP8-213ENST00000560885 PTPRUQ92729 1446 aa9.92□□□□□ -0.82
USP8-213ENST00000560885 ROCK1Q13464 1354 aa9.92□□□□□ -0.82
USP8-213ENST00000560885 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
USP8-213ENST00000560885 NALCNQ8IZF0 1738 aa9.91□□□□□ -0.82
USP8-213ENST00000560885 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
USP8-213ENST00000560885 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
USP8-213ENST00000560885 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
USP8-213ENST00000560885 LRRC59Q96AG4 307 aaKnown RBP9.91□□□□□ -0.82
USP8-213ENST00000560885 MST1RQ04912 1400 aa9.9□□□□□ -0.82
USP8-213ENST00000560885 LAMC1P11047 1609 aa9.9□□□□□ -0.82
USP8-213ENST00000560885 AFF2P51816 1311 aa9.9□□□□□ -0.82
USP8-213ENST00000560885 EP400Q96L91 3159 aa9.9□□□□□ -0.82
USP8-213ENST00000560885 NUP155O75694 1391 aa9.89□□□□□ -0.83
USP8-213ENST00000560885 KIF1BO60333 1816 aa9.89□□□□□ -0.83
USP8-213ENST00000560885 ADGRL3Q9HAR2 1447 aa9.88□□□□□ -0.83
USP8-213ENST00000560885 RBM6P78332 1123 aaKnown RBP9.87□□□□□ -0.83
USP8-213ENST00000560885 QTRT2Q9H974 415 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms