RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 AK7Q96M32 723 aa15.27■□□□□ 0.04
SYNM-203ENST00000560674 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.27■□□□□ 0.04
SYNM-203ENST00000560674 MIA2Q96PC5 1412 aa15.27■□□□□ 0.03
SYNM-203ENST00000560674 WWC1Q8IX03 1113 aa15.27■□□□□ 0.03
SYNM-203ENST00000560674 VPS37DQ86XT2 251 aa15.26■□□□□ 0.03
SYNM-203ENST00000560674 KIF21BO75037 1637 aa15.26■□□□□ 0.03
SYNM-203ENST00000560674 NINLQ9Y2I6 1382 aa15.26■□□□□ 0.03
SYNM-203ENST00000560674 TRAK2O60296 914 aa15.26■□□□□ 0.03
SYNM-203ENST00000560674 STAC3Q96MF2 364 aa15.26■□□□□ 0.03
SYNM-203ENST00000560674 PTPRGP23470 1445 aa15.26■□□□□ 0.03
SYNM-203ENST00000560674 HMOX1P09601 288 aa15.25■□□□□ 0.03
SYNM-203ENST00000560674 CDR1P51861 262 aa15.25■□□□□ 0.03
SYNM-203ENST00000560674 RALYLQ86SE5 291 aaKnown RBP15.25■□□□□ 0.03
SYNM-203ENST00000560674 MTERF4Q7Z6M4 381 aaKnown RBP15.25■□□□□ 0.03
SYNM-203ENST00000560674 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
SYNM-203ENST00000560674 HSP90B2PQ58FF3 399 aa15.25■□□□□ 0.03
SYNM-203ENST00000560674 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
SYNM-203ENST00000560674 LETM1O95202 739 aaPredicted RBP15.24■□□□□ 0.03
SYNM-203ENST00000560674 PSMA5P28066 241 aa15.24■□□□□ 0.03
SYNM-203ENST00000560674 CUX1P39880 1505 aa15.24■□□□□ 0.03
SYNM-203ENST00000560674 UBTFL1P0CB47 393 aaPredicted RBP15.24■□□□□ 0.03
SYNM-203ENST00000560674 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
SYNM-203ENST00000560674 MAP7D2Q96T17 732 aa15.24■□□□□ 0.03
SYNM-203ENST00000560674 MBD3O95983 291 aa15.24■□□□□ 0.03
SYNM-203ENST00000560674 NAP1L1P55209 391 aaKnown RBP15.23■□□□□ 0.03
SYNM-203ENST00000560674 NOM1Q5C9Z4 860 aaKnown RBP15.23■□□□□ 0.03
SYNM-203ENST00000560674 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
SYNM-203ENST00000560674 CNTROBQ8N137 903 aa15.23■□□□□ 0.03
SYNM-203ENST00000560674 ADAMTS8Q9UP79 889 aa15.23■□□□□ 0.03
SYNM-203ENST00000560674 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
SYNM-203ENST00000560674 SDF4Q9BRK5 362 aa15.22■□□□□ 0.03
SYNM-203ENST00000560674 CAVIN1Q6NZI2 390 aaKnown RBP15.22■□□□□ 0.03
SYNM-203ENST00000560674 NEUROD6Q96NK8 337 aa15.22■□□□□ 0.03
SYNM-203ENST00000560674 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
SYNM-203ENST00000560674 GGNBP2Q9H3C7 697 aa15.21■□□□□ 0.03
SYNM-203ENST00000560674 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
SYNM-203ENST00000560674 PSME1Q06323 249 aa15.21■□□□□ 0.03
SYNM-203ENST00000560674 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.02
SYNM-203ENST00000560674 PDILTQ8N807 584 aa15.21■□□□□ 0.02
SYNM-203ENST00000560674 TSPY26PQ9H489 355 aa15.2■□□□□ 0.02
SYNM-203ENST00000560674 MCM2P49736 904 aa15.2■□□□□ 0.02
SYNM-203ENST00000560674 BRMS1Q9HCU9 246 aa15.2■□□□□ 0.02
SYNM-203ENST00000560674 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
SYNM-203ENST00000560674 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
SYNM-203ENST00000560674 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
SYNM-203ENST00000560674 RABEP1Q15276 862 aa15.19■□□□□ 0.02
SYNM-203ENST00000560674 GNAI3P08754 354 aa15.19■□□□□ 0.02
SYNM-203ENST00000560674 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
SYNM-203ENST00000560674 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
SYNM-203ENST00000560674 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
SYNM-203ENST00000560674 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
SYNM-203ENST00000560674 XBP1P17861 261 aa15.18■□□□□ 0.02
SYNM-203ENST00000560674 CCDC173Q0VFZ6 552 aa15.18■□□□□ 0.02
SYNM-203ENST00000560674 NEK4P51957 841 aa15.18■□□□□ 0.02
SYNM-203ENST00000560674 AIMP1Q12904 312 aaKnown RBP15.18■□□□□ 0.02
SYNM-203ENST00000560674 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
SYNM-203ENST00000560674 PRPF40AO75400 957 aaKnown RBP15.18■□□□□ 0.02
SYNM-203ENST00000560674 RRP12Q5JTH9 1297 aaKnown RBP15.18■□□□□ 0.02
SYNM-203ENST00000560674 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
SYNM-203ENST00000560674 ERCC4Q92889 916 aaPredicted RBP15.17■□□□□ 0.02
SYNM-203ENST00000560674 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
SYNM-203ENST00000560674 SYTL4Q96C24 671 aaPredicted RBP15.17■□□□□ 0.02
SYNM-203ENST00000560674 MTHFSP49914 203 aa15.17■□□□□ 0.02
SYNM-203ENST00000560674 KINO60870 393 aaKnown RBP15.17■□□□□ 0.02
SYNM-203ENST00000560674 PDCP20941 246 aa15.17■□□□□ 0.02
SYNM-203ENST00000560674 CT47A1Q5JQC4 288 aaPredicted RBP15.17■□□□□ 0.02
SYNM-203ENST00000560674 CAGE1Q8TC20 777 aa15.17■□□□□ 0.02
SYNM-203ENST00000560674 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
SYNM-203ENST00000560674 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
SYNM-203ENST00000560674 MSH5O43196 834 aa15.16■□□□□ 0.02
SYNM-203ENST00000560674 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
SYNM-203ENST00000560674 PDE3AQ14432 1141 aa15.16■□□□□ 0.02
SYNM-203ENST00000560674 OFD1O75665 1012 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 SURF6O75683 361 aaKnown RBP15.15■□□□□ 0.02
SYNM-203ENST00000560674 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 ANKRD50Q9ULJ7 1429 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 CWC15Q9P013 229 aaKnown RBP15.15■□□□□ 0.02
SYNM-203ENST00000560674 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 CCP110O43303 1012 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 SMC2O95347 1197 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 EPS15P42566 896 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
SYNM-203ENST00000560674 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
SYNM-203ENST00000560674 HIP1O00291 1037 aa15.15■□□□□ 0.02
SYNM-203ENST00000560674 LRRC9Q6ZRR7 1453 aa15.14■□□□□ 0.01
SYNM-203ENST00000560674 EXOSC9Q06265 439 aaKnown RBP15.14■□□□□ 0.01
SYNM-203ENST00000560674 SART3Q15020 963 aaKnown RBP15.13■□□□□ 0.01
SYNM-203ENST00000560674 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
SYNM-203ENST00000560674 FIBPO43427 364 aa15.12■□□□□ 0.01
SYNM-203ENST00000560674 FYB1O15117 783 aa15.12■□□□□ 0.01
SYNM-203ENST00000560674 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
SYNM-203ENST00000560674 ZNF396Q96N95 335 aaPredicted RBP15.12■□□□□ 0.01
SYNM-203ENST00000560674 SMARCE1Q969G3 411 aa15.12■□□□□ 0.01
SYNM-203ENST00000560674 RBM33Q96EV2 1170 aaKnown RBP15.12■□□□□ 0.01
SYNM-203ENST00000560674 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
SYNM-203ENST00000560674 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
SYNM-203ENST00000560674 DCTN1Q14203 1278 aa15.11■□□□□ 0.01
SYNM-203ENST00000560674 FILIP1LQ4L180 1135 aa15.11■□□□□ 0.01
SYNM-203ENST00000560674 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms