RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 MYOM2P54296 1465 aa13.33□□□□□ -0.28
IDH3A-217ENST00000559889 C14orf93Q9H972 538 aaKnown RBP13.33□□□□□ -0.28
IDH3A-217ENST00000559889 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
IDH3A-217ENST00000559889 ORAI2Q96SN7 254 aa13.32□□□□□ -0.28
IDH3A-217ENST00000559889 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
IDH3A-217ENST00000559889 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
IDH3A-217ENST00000559889 CFAP70Q5T0N1 1121 aa13.31□□□□□ -0.28
IDH3A-217ENST00000559889 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
IDH3A-217ENST00000559889 LAMC1P11047 1609 aa13.3□□□□□ -0.28
IDH3A-217ENST00000559889 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
IDH3A-217ENST00000559889 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
IDH3A-217ENST00000559889 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
IDH3A-217ENST00000559889 SOS2Q07890 1332 aaPredicted RBP13.28□□□□□ -0.28
IDH3A-217ENST00000559889 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.28
IDH3A-217ENST00000559889 NUTM2BA6NNL0 878 aaPredicted RBP13.26□□□□□ -0.29
IDH3A-217ENST00000559889 NUTM2EB1AL46 878 aaPredicted RBP13.26□□□□□ -0.29
IDH3A-217ENST00000559889 NUTM2AQ8IVF1 878 aaPredicted RBP13.26□□□□□ -0.29
IDH3A-217ENST00000559889 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
IDH3A-217ENST00000559889 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
IDH3A-217ENST00000559889 ADGRB1O14514 1584 aa13.25□□□□□ -0.29
IDH3A-217ENST00000559889 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
IDH3A-217ENST00000559889 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
IDH3A-217ENST00000559889 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
IDH3A-217ENST00000559889 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
IDH3A-217ENST00000559889 PXDNQ92626 1479 aa13.23□□□□□ -0.29
IDH3A-217ENST00000559889 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
IDH3A-217ENST00000559889 FOXO3O43524 673 aa13.22□□□□□ -0.29
IDH3A-217ENST00000559889 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
IDH3A-217ENST00000559889 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
IDH3A-217ENST00000559889 NPHP3Q7Z494 1330 aa13.22□□□□□ -0.29
IDH3A-217ENST00000559889 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
IDH3A-217ENST00000559889 STAC3Q96MF2 364 aa13.22□□□□□ -0.29
IDH3A-217ENST00000559889 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
IDH3A-217ENST00000559889 SAFB2Q14151 953 aaKnown RBP eCLIP13.2□□□□□ -0.3
IDH3A-217ENST00000559889 AFF2P51816 1311 aa13.2□□□□□ -0.3
IDH3A-217ENST00000559889 TRAK1Q9UPV9 953 aa13.19□□□□□ -0.3
IDH3A-217ENST00000559889 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
IDH3A-217ENST00000559889 COL22A1Q8NFW1 1626 aaPredicted RBP13.18□□□□□ -0.3
IDH3A-217ENST00000559889 ADAMTS2O95450 1211 aa13.18□□□□□ -0.3
IDH3A-217ENST00000559889 POGKQ9P215 609 aa13.18□□□□□ -0.3
IDH3A-217ENST00000559889 ADGRB2O60241 1585 aa13.17□□□□□ -0.3
IDH3A-217ENST00000559889 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
IDH3A-217ENST00000559889 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
IDH3A-217ENST00000559889 RXRBP28702 533 aa13.15□□□□□ -0.3
IDH3A-217ENST00000559889 HIRIP3Q9BW71 556 aaPredicted RBP13.15□□□□□ -0.3
IDH3A-217ENST00000559889 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
IDH3A-217ENST00000559889 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
IDH3A-217ENST00000559889 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
IDH3A-217ENST00000559889 SPATA31A3Q5VYP0 1347 aa13.15□□□□□ -0.3
IDH3A-217ENST00000559889 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
IDH3A-217ENST00000559889 ANKARQ7Z5J8 1434 aa13.14□□□□□ -0.31
IDH3A-217ENST00000559889 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
IDH3A-217ENST00000559889 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
IDH3A-217ENST00000559889 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
IDH3A-217ENST00000559889 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
IDH3A-217ENST00000559889 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
IDH3A-217ENST00000559889 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
IDH3A-217ENST00000559889 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
IDH3A-217ENST00000559889 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
IDH3A-217ENST00000559889 PMFBP1Q8TBY8 1022 aa13.11□□□□□ -0.31
IDH3A-217ENST00000559889 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
IDH3A-217ENST00000559889 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
IDH3A-217ENST00000559889 USP21Q9UK80 565 aa13.11□□□□□ -0.31
IDH3A-217ENST00000559889 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
IDH3A-217ENST00000559889 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
IDH3A-217ENST00000559889 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
IDH3A-217ENST00000559889 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
IDH3A-217ENST00000559889 PSME1Q06323 249 aa13.1□□□□□ -0.31
IDH3A-217ENST00000559889 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
IDH3A-217ENST00000559889 RGS12O14924 1447 aa13.09□□□□□ -0.31
IDH3A-217ENST00000559889 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
IDH3A-217ENST00000559889 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.31
IDH3A-217ENST00000559889 ATRNO75882 1429 aa13.08□□□□□ -0.32
IDH3A-217ENST00000559889 CABLES1Q8TDN4 633 aa13.07□□□□□ -0.32
IDH3A-217ENST00000559889 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
IDH3A-217ENST00000559889 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
IDH3A-217ENST00000559889 ATP7BP35670 1465 aa13.07□□□□□ -0.32
IDH3A-217ENST00000559889 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
IDH3A-217ENST00000559889 EP400Q96L91 3159 aa13.07□□□□□ -0.32
IDH3A-217ENST00000559889 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
IDH3A-217ENST00000559889 SLIT2O94813 1529 aa13.06□□□□□ -0.32
IDH3A-217ENST00000559889 ARHGEF10O15013 1369 aa13.06□□□□□ -0.32
IDH3A-217ENST00000559889 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
IDH3A-217ENST00000559889 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
IDH3A-217ENST00000559889 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
IDH3A-217ENST00000559889 GPRASP1Q5JY77 1395 aa13.04□□□□□ -0.32
IDH3A-217ENST00000559889 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
IDH3A-217ENST00000559889 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
IDH3A-217ENST00000559889 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
IDH3A-217ENST00000559889 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
IDH3A-217ENST00000559889 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
IDH3A-217ENST00000559889 ABCA3Q99758 1704 aa13.03□□□□□ -0.32
IDH3A-217ENST00000559889 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.32
IDH3A-217ENST00000559889 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
IDH3A-217ENST00000559889 CENPJQ9HC77 1338 aaPredicted RBP13.01□□□□□ -0.33
IDH3A-217ENST00000559889 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
IDH3A-217ENST00000559889 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
IDH3A-217ENST00000559889 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
IDH3A-217ENST00000559889 POLR3AO14802 1390 aaPredicted RBP13.01□□□□□ -0.33
IDH3A-217ENST00000559889 TOPAZ1Q8N9V7 1692 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms