RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
TPM1-221ENST00000559831 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
TPM1-221ENST00000559831 SBNO2Q9Y2G9 1366 aa14.54□□□□□ -0.08
TPM1-221ENST00000559831 TULP4Q9NRJ4 1543 aa14.53□□□□□ -0.08
TPM1-221ENST00000559831 CCDC7Q96M83 1385 aa14.53□□□□□ -0.08
TPM1-221ENST00000559831 KIF7Q2M1P5 1343 aa14.53□□□□□ -0.08
TPM1-221ENST00000559831 WASHC2AQ641Q2 1341 aa14.53□□□□□ -0.08
TPM1-221ENST00000559831 NKTRP30414 1462 aaKnown RBP14.52□□□□□ -0.08
TPM1-221ENST00000559831 NALCNQ8IZF0 1738 aa14.52□□□□□ -0.09
TPM1-221ENST00000559831 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
TPM1-221ENST00000559831 EVC2Q86UK5 1308 aa14.5□□□□□ -0.09
TPM1-221ENST00000559831 PROSER2Q86WR7 435 aaPredicted RBP14.5□□□□□ -0.09
TPM1-221ENST00000559831 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
TPM1-221ENST00000559831 ADGRB2O60241 1585 aa14.5□□□□□ -0.09
TPM1-221ENST00000559831 ZNF335Q9H4Z2 1342 aaPredicted RBP14.49□□□□□ -0.09
TPM1-221ENST00000559831 CDCA8Q53HL2 280 aa14.49□□□□□ -0.09
TPM1-221ENST00000559831 SRPK2P78362 688 aaKnown RBP14.48□□□□□ -0.09
TPM1-221ENST00000559831 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
TPM1-221ENST00000559831 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
TPM1-221ENST00000559831 MYOM1P52179 1685 aa14.48□□□□□ -0.09
TPM1-221ENST00000559831 XIRP1Q702N8 1843 aaKnown RBP14.48□□□□□ -0.09
TPM1-221ENST00000559831 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
TPM1-221ENST00000559831 CDK19Q9BWU1 502 aa14.47□□□□□ -0.09
TPM1-221ENST00000559831 WASLO00401 505 aaPredicted RBP14.46□□□□□ -0.09
TPM1-221ENST00000559831 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
TPM1-221ENST00000559831 ADGRL3Q9HAR2 1447 aa14.45□□□□□ -0.1
TPM1-221ENST00000559831 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
TPM1-221ENST00000559831 TMEM94Q12767 1356 aa14.45□□□□□ -0.1
TPM1-221ENST00000559831 CDC42BPGQ6DT37 1551 aa14.44□□□□□ -0.1
TPM1-221ENST00000559831 LRRC7Q96NW7 1537 aa14.43□□□□□ -0.1
TPM1-221ENST00000559831 TMC1Q8TDI8 760 aa14.43□□□□□ -0.1
TPM1-221ENST00000559831 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
TPM1-221ENST00000559831 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
TPM1-221ENST00000559831 ATAD2Q6PL18 1390 aa14.42□□□□□ -0.1
TPM1-221ENST00000559831 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
TPM1-221ENST00000559831 PUS7Q96PZ0 661 aaKnown RBP14.41□□□□□ -0.1
TPM1-221ENST00000559831 TOPAZ1Q8N9V7 1692 aa14.41□□□□□ -0.1
TPM1-221ENST00000559831 DIEXFQ68CQ4 756 aaKnown RBP14.4□□□□□ -0.1
TPM1-221ENST00000559831 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
TPM1-221ENST00000559831 NCOA3Q9Y6Q9 1424 aa14.4□□□□□ -0.1
TPM1-221ENST00000559831 ATP7BP35670 1465 aa14.39□□□□□ -0.11
TPM1-221ENST00000559831 MSH6P52701 1360 aa14.39□□□□□ -0.11
TPM1-221ENST00000559831 LTBP4Q8N2S1 1624 aa14.39□□□□□ -0.11
TPM1-221ENST00000559831 PRR36Q9H6K5 1346 aa14.39□□□□□ -0.11
TPM1-221ENST00000559831 C19orf44Q9H6X5 657 aa14.38□□□□□ -0.11
TPM1-221ENST00000559831 PPIP5K1Q6PFW1 1433 aa14.38□□□□□ -0.11
TPM1-221ENST00000559831 ATF3P18847 181 aa14.37□□□□□ -0.11
TPM1-221ENST00000559831 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
TPM1-221ENST00000559831 PANK3Q9H999 370 aa14.37□□□□□ -0.11
TPM1-221ENST00000559831 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
TPM1-221ENST00000559831 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
TPM1-221ENST00000559831 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
TPM1-221ENST00000559831 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
TPM1-221ENST00000559831 DCCP43146 1447 aa14.35□□□□□ -0.11
TPM1-221ENST00000559831 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
TPM1-221ENST00000559831 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
TPM1-221ENST00000559831 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
TPM1-221ENST00000559831 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.12
TPM1-221ENST00000559831 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.12
TPM1-221ENST00000559831 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.12
TPM1-221ENST00000559831 A0A1W2PP64 1363 aa14.33□□□□□ -0.12
TPM1-221ENST00000559831 CNGB1Q14028 1251 aaPredicted RBP14.32□□□□□ -0.12
TPM1-221ENST00000559831 PMFBP1Q8TBY8 1022 aa14.32□□□□□ -0.12
TPM1-221ENST00000559831 MST1RQ04912 1400 aa14.32□□□□□ -0.12
TPM1-221ENST00000559831 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
TPM1-221ENST00000559831 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
TPM1-221ENST00000559831 KIF1AQ12756 1690 aa14.31□□□□□ -0.12
TPM1-221ENST00000559831 ESCO1Q5FWF5 840 aa14.31□□□□□ -0.12
TPM1-221ENST00000559831 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
TPM1-221ENST00000559831 KIF20BQ96Q89 1820 aa14.3□□□□□ -0.12
TPM1-221ENST00000559831 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
TPM1-221ENST00000559831 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
TPM1-221ENST00000559831 KNSTRNQ9Y448 316 aa14.3□□□□□ -0.12
TPM1-221ENST00000559831 KTN1Q86UP2 1357 aaKnown RBP14.3□□□□□ -0.12
TPM1-221ENST00000559831 PLEKHG3A1L390 1219 aa14.29□□□□□ -0.12
TPM1-221ENST00000559831 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
TPM1-221ENST00000559831 ACEP12821 1306 aa14.29□□□□□ -0.12
TPM1-221ENST00000559831 CPSF1Q10570 1443 aaKnown RBP14.28□□□□□ -0.12
TPM1-221ENST00000559831 ORAI2Q96SN7 254 aa14.28□□□□□ -0.12
TPM1-221ENST00000559831 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
TPM1-221ENST00000559831 PER1O15534 1290 aaPredicted RBP14.27□□□□□ -0.13
TPM1-221ENST00000559831 ANP32CO43423 234 aa14.27□□□□□ -0.13
TPM1-221ENST00000559831 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
TPM1-221ENST00000559831 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
TPM1-221ENST00000559831 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
TPM1-221ENST00000559831 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
TPM1-221ENST00000559831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.25□□□□□ -0.13
TPM1-221ENST00000559831 USP6P35125 1406 aa14.24□□□□□ -0.13
TPM1-221ENST00000559831 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
TPM1-221ENST00000559831 CGNL1Q0VF96 1302 aa14.24□□□□□ -0.13
TPM1-221ENST00000559831 SLAIN2Q9P270 581 aa14.24□□□□□ -0.13
TPM1-221ENST00000559831 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
TPM1-221ENST00000559831 FOXO3O43524 673 aa14.22□□□□□ -0.13
TPM1-221ENST00000559831 XPCQ01831 940 aaPredicted RBP14.22□□□□□ -0.13
TPM1-221ENST00000559831 PSME1Q06323 249 aa14.22□□□□□ -0.13
TPM1-221ENST00000559831 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
TPM1-221ENST00000559831 MIER1Q8N108 512 aa14.22□□□□□ -0.13
TPM1-221ENST00000559831 ROBO1Q9Y6N7 1651 aa14.22□□□□□ -0.13
TPM1-221ENST00000559831 TTC21BQ7Z4L5 1316 aa14.21□□□□□ -0.13
TPM1-221ENST00000559831 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms