RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
ZEB1-216ENST00000559496 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
ZEB1-216ENST00000559496 EMID1Q96A84 441 aaPredicted RBP11.33□□□□□ -0.6
ZEB1-216ENST00000559496 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
ZEB1-216ENST00000559496 CUX1P39880 1505 aa11.33□□□□□ -0.6
ZEB1-216ENST00000559496 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
ZEB1-216ENST00000559496 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
ZEB1-216ENST00000559496 SPSB2Q99619 263 aa11.31□□□□□ -0.6
ZEB1-216ENST00000559496 SLC6A16Q9GZN6 736 aa11.31□□□□□ -0.6
ZEB1-216ENST00000559496 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
ZEB1-216ENST00000559496 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
ZEB1-216ENST00000559496 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
ZEB1-216ENST00000559496 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
ZEB1-216ENST00000559496 KDM4AO75164 1064 aa11.29□□□□□ -0.6
ZEB1-216ENST00000559496 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
ZEB1-216ENST00000559496 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
ZEB1-216ENST00000559496 GFRA3O60609 400 aa11.28□□□□□ -0.6
ZEB1-216ENST00000559496 AMHR2Q16671 573 aa11.28□□□□□ -0.6
ZEB1-216ENST00000559496 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.6
ZEB1-216ENST00000559496 NRG2O14511 850 aaPredicted RBP11.27□□□□□ -0.61
ZEB1-216ENST00000559496 SLC19A1P41440 591 aa11.27□□□□□ -0.61
ZEB1-216ENST00000559496 USP46P62068 366 aa11.27□□□□□ -0.61
ZEB1-216ENST00000559496 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
ZEB1-216ENST00000559496 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
ZEB1-216ENST00000559496 Q6ZNB5 142 aa11.26□□□□□ -0.61
ZEB1-216ENST00000559496 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
ZEB1-216ENST00000559496 URB2Q14146 1524 aaKnown RBP11.25□□□□□ -0.61
ZEB1-216ENST00000559496 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
ZEB1-216ENST00000559496 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
ZEB1-216ENST00000559496 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
ZEB1-216ENST00000559496 AK7Q96M32 723 aa11.25□□□□□ -0.61
ZEB1-216ENST00000559496 Q3C1V9 767 aa11.24□□□□□ -0.61
ZEB1-216ENST00000559496 PLA2G2CQ5R387 149 aa11.24□□□□□ -0.61
ZEB1-216ENST00000559496 SPRYD7Q5W111 196 aa11.24□□□□□ -0.61
ZEB1-216ENST00000559496 FAM9AQ8IZU1 332 aaPredicted RBP11.24□□□□□ -0.61
ZEB1-216ENST00000559496 FAM160A2Q8N612 972 aaPredicted RBP11.24□□□□□ -0.61
ZEB1-216ENST00000559496 ERCC6Q03468 1493 aa11.24□□□□□ -0.61
ZEB1-216ENST00000559496 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
ZEB1-216ENST00000559496 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
ZEB1-216ENST00000559496 BCANQ96GW7 911 aa11.23□□□□□ -0.61
ZEB1-216ENST00000559496 SOGA1O94964 1423 aa11.23□□□□□ -0.61
ZEB1-216ENST00000559496 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
ZEB1-216ENST00000559496 LCE2BO14633 110 aa11.22□□□□□ -0.61
ZEB1-216ENST00000559496 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
ZEB1-216ENST00000559496 TRIM67Q6ZTA4 783 aa11.22□□□□□ -0.61
ZEB1-216ENST00000559496 TRIM66O15016 1216 aa11.21□□□□□ -0.61
ZEB1-216ENST00000559496 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
ZEB1-216ENST00000559496 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.61
ZEB1-216ENST00000559496 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
ZEB1-216ENST00000559496 EEA1Q15075 1411 aa11.21□□□□□ -0.62
ZEB1-216ENST00000559496 HOXA2O43364 376 aa11.2□□□□□ -0.62
ZEB1-216ENST00000559496 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
ZEB1-216ENST00000559496 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
ZEB1-216ENST00000559496 PRDM9Q9NQV7 894 aa11.18□□□□□ -0.62
ZEB1-216ENST00000559496 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
ZEB1-216ENST00000559496 RUSC2Q8N2Y8 1516 aa11.18□□□□□ -0.62
ZEB1-216ENST00000559496 PRR20EP86478 221 aa11.17□□□□□ -0.62
ZEB1-216ENST00000559496 PRR20CP86479 221 aa11.17□□□□□ -0.62
ZEB1-216ENST00000559496 PRR20DP86480 221 aa11.17□□□□□ -0.62
ZEB1-216ENST00000559496 PRR20BP86481 221 aa11.17□□□□□ -0.62
ZEB1-216ENST00000559496 PRR20AP86496 221 aa11.17□□□□□ -0.62
ZEB1-216ENST00000559496 FCF1Q9Y324 198 aaKnown RBP11.17□□□□□ -0.62
ZEB1-216ENST00000559496 HLA-CQ95604 372 aa11.16□□□□□ -0.62
ZEB1-216ENST00000559496 WDR62O43379 1518 aa11.16□□□□□ -0.62
ZEB1-216ENST00000559496 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
ZEB1-216ENST00000559496 USB1Q9BQ65 265 aaKnown RBP11.16□□□□□ -0.62
ZEB1-216ENST00000559496 THOC2Q8NI27 1593 aaKnown RBP11.15□□□□□ -0.62
ZEB1-216ENST00000559496 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.63
ZEB1-216ENST00000559496 SLC24A3Q9HC58 644 aa11.15□□□□□ -0.63
ZEB1-216ENST00000559496 KIF27Q86VH2 1401 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 CUX2O14529 1486 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 GDF9O60383 454 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 RPIAP49247 311 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 MMP16P51512 607 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 TRAF7Q6Q0C0 670 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
ZEB1-216ENST00000559496 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
ZEB1-216ENST00000559496 GUCA2AQ02747 115 aa11.13□□□□□ -0.63
ZEB1-216ENST00000559496 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
ZEB1-216ENST00000559496 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
ZEB1-216ENST00000559496 FDX1P10109 184 aa11.11□□□□□ -0.63
ZEB1-216ENST00000559496 PDE4DQ08499 809 aa11.11□□□□□ -0.63
ZEB1-216ENST00000559496 DXOO77932 396 aaKnown RBP11.1□□□□□ -0.63
ZEB1-216ENST00000559496 WDR97A6NE52 1622 aa11.1□□□□□ -0.63
ZEB1-216ENST00000559496 MS4A1P11836 297 aa11.09□□□□□ -0.63
ZEB1-216ENST00000559496 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
ZEB1-216ENST00000559496 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
ZEB1-216ENST00000559496 SYMPKQ92797 1274 aaKnown RBP11.08□□□□□ -0.64
ZEB1-216ENST00000559496 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
ZEB1-216ENST00000559496 PCDHGC3Q9UN70 934 aa11.08□□□□□ -0.64
ZEB1-216ENST00000559496 TARBP1Q13395 1621 aaKnown RBP11.08□□□□□ -0.64
ZEB1-216ENST00000559496 MOXD2PA6NHM9 499 aa11.07□□□□□ -0.64
ZEB1-216ENST00000559496 NDUFV2P19404 249 aa11.07□□□□□ -0.64
ZEB1-216ENST00000559496 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
ZEB1-216ENST00000559496 KIF21BO75037 1637 aa11.07□□□□□ -0.64
ZEB1-216ENST00000559496 RETREG3Q86VR2 466 aa11.06□□□□□ -0.64
ZEB1-216ENST00000559496 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
ZEB1-216ENST00000559496 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
ZEB1-216ENST00000559496 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms