RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RBM33Q96EV2 1170 aaKnown RBP23.16■■□□□ 1.3
TPM1-219ENST00000559397 TESK2Q96S53 571 aa23.16■■□□□ 1.3
TPM1-219ENST00000559397 XIRP1Q702N8 1843 aaKnown RBP23.15■■□□□ 1.3
TPM1-219ENST00000559397 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
TPM1-219ENST00000559397 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.3
TPM1-219ENST00000559397 TMEM94Q12767 1356 aa23.14■■□□□ 1.29
TPM1-219ENST00000559397 NCOA3Q9Y6Q9 1424 aa23.13■■□□□ 1.29
TPM1-219ENST00000559397 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
TPM1-219ENST00000559397 MINK1Q8N4C8 1332 aaPredicted RBP23.11■■□□□ 1.29
TPM1-219ENST00000559397 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
TPM1-219ENST00000559397 ADGRL3Q9HAR2 1447 aa23.1■■□□□ 1.29
TPM1-219ENST00000559397 TULP4Q9NRJ4 1543 aa23.07■■□□□ 1.28
TPM1-219ENST00000559397 SLC24A1O60721 1099 aa23.06■■□□□ 1.28
TPM1-219ENST00000559397 C14orf37Q86TY3 774 aa23.04■■□□□ 1.28
TPM1-219ENST00000559397 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
TPM1-219ENST00000559397 CDC42BPGQ6DT37 1551 aa23.04■■□□□ 1.28
TPM1-219ENST00000559397 WASLO00401 505 aaPredicted RBP23.03■■□□□ 1.28
TPM1-219ENST00000559397 DISP3Q9P2K9 1392 aa23.03■■□□□ 1.28
TPM1-219ENST00000559397 TMF1P82094 1093 aa23.03■■□□□ 1.28
TPM1-219ENST00000559397 EVC2Q86UK5 1308 aa23.02■■□□□ 1.28
TPM1-219ENST00000559397 C11orf95C9JLR9 678 aaPredicted RBP23.02■■□□□ 1.28
TPM1-219ENST00000559397 MIER1Q8N108 512 aa23.01■■□□□ 1.27
TPM1-219ENST00000559397 CDK19Q9BWU1 502 aa23.01■■□□□ 1.27
TPM1-219ENST00000559397 DCCP43146 1447 aa23.01■■□□□ 1.27
TPM1-219ENST00000559397 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
TPM1-219ENST00000559397 MSH6P52701 1360 aa23■■□□□ 1.27
TPM1-219ENST00000559397 FMN2Q9NZ56 1722 aa22.99■■□□□ 1.27
TPM1-219ENST00000559397 WASHC2AQ641Q2 1341 aa22.99■■□□□ 1.27
TPM1-219ENST00000559397 CABP2Q9NPB3 220 aa22.97■■□□□ 1.27
TPM1-219ENST00000559397 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
TPM1-219ENST00000559397 CCDC7Q96M83 1385 aa22.95■■□□□ 1.27
TPM1-219ENST00000559397 USP32Q8NFA0 1604 aa22.95■■□□□ 1.26
TPM1-219ENST00000559397 IQSEC2Q5JU85 1478 aa22.95■■□□□ 1.26
TPM1-219ENST00000559397 ATF3P18847 181 aa22.95■■□□□ 1.26
TPM1-219ENST00000559397 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
TPM1-219ENST00000559397 CADPS2Q86UW7 1296 aa22.94■■□□□ 1.26
TPM1-219ENST00000559397 KIF7Q2M1P5 1343 aa22.94■■□□□ 1.26
TPM1-219ENST00000559397 ATP7BP35670 1465 aa22.94■■□□□ 1.26
TPM1-219ENST00000559397 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
TPM1-219ENST00000559397 PRR36Q9H6K5 1346 aa22.93■■□□□ 1.26
TPM1-219ENST00000559397 CERKQ8TCT0 537 aa22.93■■□□□ 1.26
TPM1-219ENST00000559397 MST1RQ04912 1400 aa22.92■■□□□ 1.26
TPM1-219ENST00000559397 ANKARQ7Z5J8 1434 aa22.92■■□□□ 1.26
TPM1-219ENST00000559397 RGPD8O14715 1765 aaPredicted RBP22.92■■□□□ 1.26
TPM1-219ENST00000559397 NUTM2FA1L443 756 aa22.92■■□□□ 1.26
TPM1-219ENST00000559397 NUDT16Q96DE0 195 aaKnown RBP22.92■■□□□ 1.26
TPM1-219ENST00000559397 ATAD2Q6PL18 1390 aa22.9■■□□□ 1.26
TPM1-219ENST00000559397 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
TPM1-219ENST00000559397 C1orf167Q5SNV9 1468 aa22.89■■□□□ 1.26
TPM1-219ENST00000559397 CCDC61Q9Y6R9 512 aa22.88■■□□□ 1.25
TPM1-219ENST00000559397 POLR3GLQ9BT43 218 aa22.87■■□□□ 1.25
TPM1-219ENST00000559397 ITSN1Q15811 1721 aa22.86■■□□□ 1.25
TPM1-219ENST00000559397 MYOM1P52179 1685 aa22.86■■□□□ 1.25
TPM1-219ENST00000559397 SLAIN2Q9P270 581 aa22.85■■□□□ 1.25
TPM1-219ENST00000559397 PPIP5K1Q6PFW1 1433 aa22.85■■□□□ 1.25
TPM1-219ENST00000559397 CABP1Q9NZU7 370 aa22.84■■□□□ 1.25
TPM1-219ENST00000559397 ORAI2Q96SN7 254 aa22.83■■□□□ 1.24
TPM1-219ENST00000559397 PLEKHG3A1L390 1219 aa22.82■■□□□ 1.24
TPM1-219ENST00000559397 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
TPM1-219ENST00000559397 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
TPM1-219ENST00000559397 ESCO1Q5FWF5 840 aa22.81■■□□□ 1.24
TPM1-219ENST00000559397 TMC1Q8TDI8 760 aa22.81■■□□□ 1.24
TPM1-219ENST00000559397 TOM1O60784 492 aa22.8■■□□□ 1.24
TPM1-219ENST00000559397 PHF8Q9UPP1 1060 aa22.8■■□□□ 1.24
TPM1-219ENST00000559397 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
TPM1-219ENST00000559397 PMFBP1Q8TBY8 1022 aa22.79■■□□□ 1.24
TPM1-219ENST00000559397 KIF1AQ12756 1690 aa22.78■■□□□ 1.24
TPM1-219ENST00000559397 BRINP3Q76B58 766 aa22.78■■□□□ 1.24
TPM1-219ENST00000559397 UBAP1LF5GYI3 381 aa22.77■■□□□ 1.24
TPM1-219ENST00000559397 POLR3AO14802 1390 aaPredicted RBP22.77■■□□□ 1.24
TPM1-219ENST00000559397 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
TPM1-219ENST00000559397 ACEP12821 1306 aa22.76■■□□□ 1.23
TPM1-219ENST00000559397 AKAP12Q02952 1782 aa22.76■■□□□ 1.23
TPM1-219ENST00000559397 ANKRD36BQ8N2N9 1353 aa22.75■■□□□ 1.23
TPM1-219ENST00000559397 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
TPM1-219ENST00000559397 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
TPM1-219ENST00000559397 ANP32CO43423 234 aa22.73■■□□□ 1.23
TPM1-219ENST00000559397 NGDNQ8NEJ9 315 aaKnown RBP22.73■■□□□ 1.23
TPM1-219ENST00000559397 PANK3Q9H999 370 aa22.73■■□□□ 1.23
TPM1-219ENST00000559397 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
TPM1-219ENST00000559397 FOXO3O43524 673 aa22.71■■□□□ 1.23
TPM1-219ENST00000559397 MON2Q7Z3U7 1717 aa22.71■■□□□ 1.23
TPM1-219ENST00000559397 HDGFL2Q7Z4V5 671 aaPredicted RBP22.71■■□□□ 1.23
TPM1-219ENST00000559397 ZNF692Q9BU19 519 aaPredicted RBP22.71■■□□□ 1.23
TPM1-219ENST00000559397 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
TPM1-219ENST00000559397 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
TPM1-219ENST00000559397 NHSL1Q5SYE7 1610 aa22.7■■□□□ 1.22
TPM1-219ENST00000559397 DDX17Q92841 729 aaKnown RBP22.69■■□□□ 1.22
TPM1-219ENST00000559397 USP6P35125 1406 aa22.69■■□□□ 1.22
TPM1-219ENST00000559397 KTN1Q86UP2 1357 aaKnown RBP22.69■■□□□ 1.22
TPM1-219ENST00000559397 SSH2Q76I76 1423 aa22.68■■□□□ 1.22
TPM1-219ENST00000559397 NPHP3Q7Z494 1330 aa22.67■■□□□ 1.22
TPM1-219ENST00000559397 CCER2I3L3R5 266 aa22.67■■□□□ 1.22
TPM1-219ENST00000559397 PSME1Q06323 249 aa22.67■■□□□ 1.22
TPM1-219ENST00000559397 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
TPM1-219ENST00000559397 PXDNQ92626 1479 aa22.65■■□□□ 1.22
TPM1-219ENST00000559397 AHDC1Q5TGY3 1603 aaPredicted RBP22.65■■□□□ 1.22
TPM1-219ENST00000559397 PER1O15534 1290 aaPredicted RBP22.65■■□□□ 1.22
TPM1-219ENST00000559397 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
TPM1-219ENST00000559397 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms